RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 H7C1D1 291 aa12.44□□□□□ -0.42
CIITA-207ENST00000571545 RAD17O75943 681 aa12.44□□□□□ -0.42
CIITA-207ENST00000571545 UFL1O94874 794 aa12.44□□□□□ -0.42
CIITA-207ENST00000571545 HSPA1AP0DMV8 641 aaKnown RBP12.44□□□□□ -0.42
CIITA-207ENST00000571545 HSPA1BP0DMV9 641 aaKnown RBP12.44□□□□□ -0.42
CIITA-207ENST00000571545 GMPSP49915 693 aaPredicted RBP12.44□□□□□ -0.42
CIITA-207ENST00000571545 GPSM2P81274 684 aa12.44□□□□□ -0.42
CIITA-207ENST00000571545 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
CIITA-207ENST00000571545 DPF2Q92785 391 aa12.44□□□□□ -0.42
CIITA-207ENST00000571545 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
CIITA-207ENST00000571545 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
CIITA-207ENST00000571545 RASSF10A6NK89 507 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 ECE2O60344 883 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 ABCB7O75027 752 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 DEFB115Q30KQ5 88 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 SLC51AQ86UW1 340 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 TBC1D16Q8TBP0 767 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 ZNF428Q96B54 188 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 AIDAQ96BJ3 306 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 POLLQ9UGP5 575 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 PSME4Q14997 1843 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 ZNF609O15014 1411 aa12.43□□□□□ -0.42
CIITA-207ENST00000571545 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
CIITA-207ENST00000571545 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
CIITA-207ENST00000571545 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
CIITA-207ENST00000571545 ECE1P42892 770 aa12.42□□□□□ -0.42
CIITA-207ENST00000571545 LINS1Q8NG48 757 aa12.42□□□□□ -0.42
CIITA-207ENST00000571545 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
CIITA-207ENST00000571545 DBNDD1Q9H9R9 158 aa12.42□□□□□ -0.42
CIITA-207ENST00000571545 CNOT7Q9UIV1 285 aaKnown RBP12.42□□□□□ -0.42
CIITA-207ENST00000571545 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 PSMD14O00487 310 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
CIITA-207ENST00000571545 GCKRQ14397 625 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 CDC37L1Q7L3B6 337 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 UBE3BQ7Z3V4 1068 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 BSDC1Q9NW68 430 aaPredicted RBP12.41□□□□□ -0.42
CIITA-207ENST00000571545 PGAP2Q9UHJ9 254 aa12.41□□□□□ -0.42
CIITA-207ENST00000571545 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 H7C1W4 665 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 RIMBP2O15034 1052 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 VAMP4O75379 141 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 MAP2K1Q02750 393 aaPredicted RBP12.4□□□□□ -0.42
CIITA-207ENST00000571545 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
CIITA-207ENST00000571545 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 TTLL11Q8NHH1 800 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 HHIPL1Q96JK4 782 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 COL4A1P02462 1669 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 MED23Q9ULK4 1368 aa12.4□□□□□ -0.42
CIITA-207ENST00000571545 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
CIITA-207ENST00000571545 VEGFBP49765 207 aa12.39□□□□□ -0.43
CIITA-207ENST00000571545 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
CIITA-207ENST00000571545 G2E3Q7L622 706 aa12.39□□□□□ -0.43
CIITA-207ENST00000571545 PODNQ7Z5L7 613 aa12.39□□□□□ -0.43
CIITA-207ENST00000571545 AGBL3Q8NEM8 1001 aa12.39□□□□□ -0.43
CIITA-207ENST00000571545 CCDC85AQ96PX6 553 aaPredicted RBP12.39□□□□□ -0.43
CIITA-207ENST00000571545 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
CIITA-207ENST00000571545 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
CIITA-207ENST00000571545 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
CIITA-207ENST00000571545 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
CIITA-207ENST00000571545 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
CIITA-207ENST00000571545 MMP14P50281 582 aa12.38□□□□□ -0.43
CIITA-207ENST00000571545 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
CIITA-207ENST00000571545 BEGAINQ9BUH8 593 aa12.38□□□□□ -0.43
CIITA-207ENST00000571545 GREM2Q9H772 168 aa12.38□□□□□ -0.43
CIITA-207ENST00000571545 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
CIITA-207ENST00000571545 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
CIITA-207ENST00000571545 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
CIITA-207ENST00000571545 CELF2O95319 508 aaKnown RBP12.37□□□□□ -0.43
CIITA-207ENST00000571545 ITGA6P23229 1130 aa12.37□□□□□ -0.43
CIITA-207ENST00000571545 CTCFP49711 727 aaPredicted RBP12.37□□□□□ -0.43
CIITA-207ENST00000571545 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
CIITA-207ENST00000571545 KIF4BQ2VIQ3 1234 aa12.37□□□□□ -0.43
CIITA-207ENST00000571545 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
CIITA-207ENST00000571545 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
CIITA-207ENST00000571545 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
CIITA-207ENST00000571545 DCPSQ96C86 337 aaKnown RBP12.37□□□□□ -0.43
CIITA-207ENST00000571545 MINPP1Q9UNW1 487 aa12.37□□□□□ -0.43
CIITA-207ENST00000571545 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
CIITA-207ENST00000571545 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 TRAF5O00463 557 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
CIITA-207ENST00000571545 COL13A1Q5TAT6 717 aaPredicted RBP12.36□□□□□ -0.43
CIITA-207ENST00000571545 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
CIITA-207ENST00000571545 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 KRT26Q7Z3Y9 468 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 COA1Q9GZY4 146 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 WBP1LQ9NX94 342 aa12.36□□□□□ -0.43
CIITA-207ENST00000571545 E9PSI1 815 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 ALDH1L1O75891 902 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 CSF1RP07333 972 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 MAP2K2P36507 400 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms