RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.96
RPAIN-208ENST00000571043 TTLL11Q8NHH1 800 aa21.02■□□□□ 0.96
RPAIN-208ENST00000571043 CCDC8Q9H0W5 538 aaPredicted RBP21.02■□□□□ 0.96
RPAIN-208ENST00000571043 ABCC12Q96J65 1359 aa21.02■□□□□ 0.96
RPAIN-208ENST00000571043 MAP4K4O95819 1239 aaPredicted RBP21.01■□□□□ 0.95
RPAIN-208ENST00000571043 TNNI3KQ59H18 835 aa21.01■□□□□ 0.95
RPAIN-208ENST00000571043 NLRP3Q96P20 1036 aa21.01■□□□□ 0.95
RPAIN-208ENST00000571043 GPR108Q9NPR9 543 aa21.01■□□□□ 0.95
RPAIN-208ENST00000571043 FPGT-TNNI3KV9GXZ4 949 aa21.01■□□□□ 0.95
RPAIN-208ENST00000571043 RIC1Q4ADV7 1423 aa21.01■□□□□ 0.95
RPAIN-208ENST00000571043 K7ELQ4 463 aaPredicted RBP21■□□□□ 0.95
RPAIN-208ENST00000571043 CTSWP56202 376 aa21■□□□□ 0.95
RPAIN-208ENST00000571043 ANAPC15P60006 121 aa21■□□□□ 0.95
RPAIN-208ENST00000571043 TFCP2Q12800 502 aa21■□□□□ 0.95
RPAIN-208ENST00000571043 SF3B3Q15393 1217 aaKnown RBP21■□□□□ 0.95
RPAIN-208ENST00000571043 IL17RAQ96F46 866 aa21■□□□□ 0.95
RPAIN-208ENST00000571043 SGIP1Q9BQI5 828 aa21■□□□□ 0.95
RPAIN-208ENST00000571043 SLKQ9H2G2 1235 aaPredicted RBP21■□□□□ 0.95
RPAIN-208ENST00000571043 CHMP3Q9Y3E7 222 aa21■□□□□ 0.95
RPAIN-208ENST00000571043 SGSM2O43147 1006 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 CIAO1O76071 339 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 POLD1P28340 1107 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 IL15P40933 162 aaPredicted RBP20.99■□□□□ 0.95
RPAIN-208ENST00000571043 RUFY2Q8WXA3 655 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 BRIP1Q9BX63 1249 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 ANO2Q9NQ90 1003 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 FBXO3Q9UK99 471 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 KLRG2A4D1S0 409 aaPredicted RBP20.99■□□□□ 0.95
RPAIN-208ENST00000571043 IL27Q8NEV9 243 aa20.99■□□□□ 0.95
RPAIN-208ENST00000571043 TLR7Q9NYK1 1049 aaKnown RBP20.99■□□□□ 0.95
RPAIN-208ENST00000571043 ANKRD31Q8N7Z5 1873 aa20.98■□□□□ 0.95
RPAIN-208ENST00000571043 EYA2O00167 538 aa20.98■□□□□ 0.95
RPAIN-208ENST00000571043 HIP1O00291 1037 aa20.98■□□□□ 0.95
RPAIN-208ENST00000571043 PTGER2P43116 358 aa20.98■□□□□ 0.95
RPAIN-208ENST00000571043 NFKBIBQ15653 356 aa20.98■□□□□ 0.95
RPAIN-208ENST00000571043 C3orf67Q6ZVT6 689 aa20.98■□□□□ 0.95
RPAIN-208ENST00000571043 ATG9AQ7Z3C6 839 aa20.98■□□□□ 0.95
RPAIN-208ENST00000571043 ATP5JP18859 108 aa20.97■□□□□ 0.95
RPAIN-208ENST00000571043 DIAPH3Q9NSV4 1193 aa20.97■□□□□ 0.95
RPAIN-208ENST00000571043 CHMP5Q9NZZ3 219 aa20.97■□□□□ 0.95
RPAIN-208ENST00000571043 CD2BP2O95400 341 aaKnown RBP20.96■□□□□ 0.95
RPAIN-208ENST00000571043 CCDC152Q4G0S7 254 aa20.96■□□□□ 0.95
RPAIN-208ENST00000571043 DBNLQ9UJU6 430 aaKnown RBP20.96■□□□□ 0.95
RPAIN-208ENST00000571043 ST18O60284 1047 aa20.95■□□□□ 0.94
RPAIN-208ENST00000571043 CCDC57Q2TAC2 916 aa20.95■□□□□ 0.94
RPAIN-208ENST00000571043 CRY2Q49AN0 593 aa20.95■□□□□ 0.94
RPAIN-208ENST00000571043 GREM2Q9H772 168 aa20.95■□□□□ 0.94
RPAIN-208ENST00000571043 SPON1Q9HCB6 807 aa20.95■□□□□ 0.94
RPAIN-208ENST00000571043 RTL9Q8NET4 1388 aa20.95■□□□□ 0.94
RPAIN-208ENST00000571043 TNRC6CQ9HCJ0 1690 aaKnown RBP20.94■□□□□ 0.94
RPAIN-208ENST00000571043 DDIT3P35638 169 aa20.94■□□□□ 0.94
RPAIN-208ENST00000571043 PDE6BP35913 854 aa20.94■□□□□ 0.94
RPAIN-208ENST00000571043 CCDC85AQ96PX6 553 aaPredicted RBP20.94■□□□□ 0.94
RPAIN-208ENST00000571043 IL25Q9H293 177 aa20.94■□□□□ 0.94
RPAIN-208ENST00000571043 BOLA2Q9H3K6 86 aa20.94■□□□□ 0.94
RPAIN-208ENST00000571043 HSPA4P34932 840 aa20.94■□□□□ 0.94
RPAIN-208ENST00000571043 IFIT5Q13325 482 aaKnown RBP20.94■□□□□ 0.94
RPAIN-208ENST00000571043 CIZ1Q9ULV3 898 aaPredicted RBP20.94■□□□□ 0.94
RPAIN-208ENST00000571043 RAD50Q92878 1312 aa20.93■□□□□ 0.94
RPAIN-208ENST00000571043 KIF13BQ9NQT8 1826 aa20.93■□□□□ 0.94
RPAIN-208ENST00000571043 TAF1P21675 1872 aa20.93■□□□□ 0.94
RPAIN-208ENST00000571043 ITGA6P23229 1130 aa20.93■□□□□ 0.94
RPAIN-208ENST00000571043 CWC27Q6UX04 472 aaKnown RBP20.93■□□□□ 0.94
RPAIN-208ENST00000571043 KIAA1211Q6ZU35 1233 aa20.93■□□□□ 0.94
RPAIN-208ENST00000571043 SPRYD3Q8NCJ5 442 aa20.93■□□□□ 0.94
RPAIN-208ENST00000571043 LSG1Q9H089 658 aaKnown RBP20.93■□□□□ 0.94
RPAIN-208ENST00000571043 DBNDD2Q9BQY9 259 aa20.92■□□□□ 0.94
RPAIN-208ENST00000571043 SNRKQ9NRH2 765 aa20.92■□□□□ 0.94
RPAIN-208ENST00000571043 C10orf71Q711Q0 1435 aa20.92■□□□□ 0.94
RPAIN-208ENST00000571043 ANKRD18BA2A2Z9 1011 aa20.91■□□□□ 0.94
RPAIN-208ENST00000571043 SRGNP10124 158 aa20.91■□□□□ 0.94
RPAIN-208ENST00000571043 HOXA10P31260 410 aaPredicted RBP20.91■□□□□ 0.94
RPAIN-208ENST00000571043 LRRC24Q50LG9 513 aa20.91■□□□□ 0.94
RPAIN-208ENST00000571043 SEC31BQ9NQW1 1179 aa20.91■□□□□ 0.94
RPAIN-208ENST00000571043 RFX7Q2KHR2 1363 aa20.91■□□□□ 0.94
RPAIN-208ENST00000571043 MCM2P49736 904 aa20.9■□□□□ 0.94
RPAIN-208ENST00000571043 TICAM2Q86XR7 235 aa20.9■□□□□ 0.94
RPAIN-208ENST00000571043 ZNF594Q96JF6 807 aaPredicted RBP20.9■□□□□ 0.94
RPAIN-208ENST00000571043 DDX46Q7L014 1031 aaKnown RBP20.89■□□□□ 0.94
RPAIN-208ENST00000571043 HAUS7Q99871 368 aa20.89■□□□□ 0.94
RPAIN-208ENST00000571043 FSD1Q9BTV5 496 aa20.89■□□□□ 0.94
RPAIN-208ENST00000571043 CEP126Q9P2H0 1117 aa20.89■□□□□ 0.94
RPAIN-208ENST00000571043 PALD1Q9ULE6 856 aa20.89■□□□□ 0.94
RPAIN-208ENST00000571043 HSP90AA1P07900 732 aaKnown RBP20.88■□□□□ 0.93
RPAIN-208ENST00000571043 RPGRQ92834 1020 aaKnown RBP20.88■□□□□ 0.93
RPAIN-208ENST00000571043 AKAP2Q9Y2D5 859 aa20.88■□□□□ 0.93
RPAIN-208ENST00000571043 ZNF609O15014 1411 aa20.88■□□□□ 0.93
RPAIN-208ENST00000571043 H0YIN7 160 aa20.88■□□□□ 0.93
RPAIN-208ENST00000571043 NPR1P16066 1061 aa20.88■□□□□ 0.93
RPAIN-208ENST00000571043 TAF7LQ5H9L4 462 aa20.88■□□□□ 0.93
RPAIN-208ENST00000571043 RBM17Q96I25 401 aaKnown RBP20.88■□□□□ 0.93
RPAIN-208ENST00000571043 CRAMP1Q96RY5 1269 aa20.88■□□□□ 0.93
RPAIN-208ENST00000571043 CDC5LQ99459 802 aaKnown RBP20.88■□□□□ 0.93
RPAIN-208ENST00000571043 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
RPAIN-208ENST00000571043 TGFB2P61812 414 aa20.87■□□□□ 0.93
RPAIN-208ENST00000571043 RPS8P62241 208 aaKnown RBP20.87■□□□□ 0.93
RPAIN-208ENST00000571043 C2CD5Q86YS7 1000 aa20.87■□□□□ 0.93
RPAIN-208ENST00000571043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.87■□□□□ 0.93
RPAIN-208ENST00000571043 MASTLQ96GX5 879 aa20.87■□□□□ 0.93
RPAIN-208ENST00000571043 CD2APQ9Y5K6 639 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms