RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
CDC27-212ENST00000570818 HFE2Q6ZVN8 426 aa11.26□□□□□ -0.61
CDC27-212ENST00000570818 POLIQ9UNA4 740 aa11.26□□□□□ -0.61
CDC27-212ENST00000570818 SPATA31C1P0DKV0 1188 aa11.25□□□□□ -0.61
CDC27-212ENST00000570818 NID1P14543 1247 aa11.25□□□□□ -0.61
CDC27-212ENST00000570818 COL8A1P27658 744 aa11.25□□□□□ -0.61
CDC27-212ENST00000570818 TRIM28Q13263 835 aaKnown RBP11.25□□□□□ -0.61
CDC27-212ENST00000570818 TXNDC2Q86VQ3 553 aa11.25□□□□□ -0.61
CDC27-212ENST00000570818 TTC9Q92623 222 aa11.25□□□□□ -0.61
CDC27-212ENST00000570818 LPIN3Q9BQK8 851 aa11.25□□□□□ -0.61
CDC27-212ENST00000570818 AFF1P51825 1210 aaKnown RBP11.24□□□□□ -0.61
CDC27-212ENST00000570818 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
CDC27-212ENST00000570818 PMEPA1Q969W9 287 aa11.24□□□□□ -0.61
CDC27-212ENST00000570818 SMG9Q9H0W8 520 aaKnown RBP11.24□□□□□ -0.61
CDC27-212ENST00000570818 RAC1P63000 192 aa11.23□□□□□ -0.61
CDC27-212ENST00000570818 PLD4Q96BZ4 506 aa11.23□□□□□ -0.61
CDC27-212ENST00000570818 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
CDC27-212ENST00000570818 J3QW42 95 aa11.22□□□□□ -0.61
CDC27-212ENST00000570818 IGHA1P01876 353 aa11.22□□□□□ -0.61
CDC27-212ENST00000570818 NDUFB5O43674 189 aa11.21□□□□□ -0.61
CDC27-212ENST00000570818 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
CDC27-212ENST00000570818 NCAPG2Q86XI2 1143 aa11.21□□□□□ -0.61
CDC27-212ENST00000570818 WFDC8Q8IUA0 241 aa11.21□□□□□ -0.61
CDC27-212ENST00000570818 CACTIN-AS1Q8N1I8 211 aa11.21□□□□□ -0.61
CDC27-212ENST00000570818 GGNBP2Q9H3C7 697 aa11.21□□□□□ -0.61
CDC27-212ENST00000570818 TMEM63CQ9P1W3 806 aa11.21□□□□□ -0.61
CDC27-212ENST00000570818 FZD6O60353 706 aa11.2□□□□□ -0.62
CDC27-212ENST00000570818 APBA3O96018 575 aa11.2□□□□□ -0.62
CDC27-212ENST00000570818 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
CDC27-212ENST00000570818 NACC1Q96RE7 527 aa11.2□□□□□ -0.62
CDC27-212ENST00000570818 SMNDC1O75940 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDC27-212ENST00000570818 CES1P23141 567 aa11.19□□□□□ -0.62
CDC27-212ENST00000570818 PLA2G4EQ3MJ16 856 aa11.19□□□□□ -0.62
CDC27-212ENST00000570818 GPAT2Q6NUI2 795 aa11.19□□□□□ -0.62
CDC27-212ENST00000570818 GNEQ9Y223 722 aaKnown RBP11.19□□□□□ -0.62
CDC27-212ENST00000570818 KRBA1A5PL33 1030 aa11.18□□□□□ -0.62
CDC27-212ENST00000570818 DTWD1Q8N5C7 304 aa11.18□□□□□ -0.62
CDC27-212ENST00000570818 SNX29Q8TEQ0 813 aa11.18□□□□□ -0.62
CDC27-212ENST00000570818 CCDC87Q9NVE4 849 aa11.18□□□□□ -0.62
CDC27-212ENST00000570818 A6NHS1 94 aa11.17□□□□□ -0.62
CDC27-212ENST00000570818 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
CDC27-212ENST00000570818 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
CDC27-212ENST00000570818 PHACTR2O75167 634 aa11.17□□□□□ -0.62
CDC27-212ENST00000570818 KIF4AO95239 1232 aa11.17□□□□□ -0.62
CDC27-212ENST00000570818 PDE3BQ13370 1112 aa11.17□□□□□ -0.62
CDC27-212ENST00000570818 DMRTC2Q8IXT2 367 aaPredicted RBP11.17□□□□□ -0.62
CDC27-212ENST00000570818 GJD3Q8N144 294 aa11.17□□□□□ -0.62
CDC27-212ENST00000570818 NEFLP07196 543 aa11.16□□□□□ -0.62
CDC27-212ENST00000570818 GDF6Q6KF10 455 aaPredicted RBP11.16□□□□□ -0.62
CDC27-212ENST00000570818 CITED4Q96RK1 184 aa11.16□□□□□ -0.62
CDC27-212ENST00000570818 CNTN3Q9P232 1028 aa11.16□□□□□ -0.62
CDC27-212ENST00000570818 A0A0A0MRY4 1105 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 MSTNO14793 375 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 TNFRSF21O75509 655 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 CYP2E1P05181 493 aaPredicted RBP11.15□□□□□ -0.62
CDC27-212ENST00000570818 ELNP15502 786 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 KCNA1Q09470 495 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 C1orf127Q8N9H9 656 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 TRAIPQ9BWF2 469 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 MUC3BQ9H195 1237 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 KANSL3Q9P2N6 904 aa11.15□□□□□ -0.62
CDC27-212ENST00000570818 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
CDC27-212ENST00000570818 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
CDC27-212ENST00000570818 GRIK5Q16478 980 aa11.14□□□□□ -0.63
CDC27-212ENST00000570818 COL13A1Q5TAT6 717 aaPredicted RBP11.14□□□□□ -0.63
CDC27-212ENST00000570818 CEP135Q66GS9 1140 aa11.14□□□□□ -0.63
CDC27-212ENST00000570818 BIN2Q9UBW5 565 aaPredicted RBP11.14□□□□□ -0.63
CDC27-212ENST00000570818 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
CDC27-212ENST00000570818 SRA1Q9HD15 236 aaKnown RBP11.13□□□□□ -0.63
CDC27-212ENST00000570818 EDN3P14138 238 aa11.12□□□□□ -0.63
CDC27-212ENST00000570818 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
CDC27-212ENST00000570818 IL22RA1Q8N6P7 574 aa11.12□□□□□ -0.63
CDC27-212ENST00000570818 CEP120Q8N960 986 aa11.12□□□□□ -0.63
CDC27-212ENST00000570818 TMC1Q8TDI8 760 aa11.12□□□□□ -0.63
CDC27-212ENST00000570818 PBX4Q9BYU1 374 aa11.12□□□□□ -0.63
CDC27-212ENST00000570818 SALL4Q9UJQ4 1053 aa11.12□□□□□ -0.63
CDC27-212ENST00000570818 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
CDC27-212ENST00000570818 C9orf172C9J069 976 aa11.11□□□□□ -0.63
CDC27-212ENST00000570818 ATP11AP98196 1134 aa11.11□□□□□ -0.63
CDC27-212ENST00000570818 MAP4K3Q8IVH8 894 aa11.11□□□□□ -0.63
CDC27-212ENST00000570818 RASSF4Q9H2L5 321 aa11.11□□□□□ -0.63
CDC27-212ENST00000570818 TRIM33Q9UPN9 1127 aa11.11□□□□□ -0.63
CDC27-212ENST00000570818 ECM1Q16610 540 aa11.1□□□□□ -0.63
CDC27-212ENST00000570818 CD163Q86VB7 1156 aa11.1□□□□□ -0.63
CDC27-212ENST00000570818 AMOTL2Q9Y2J4 779 aa11.1□□□□□ -0.63
CDC27-212ENST00000570818 PTPRAP18433 802 aa11.09□□□□□ -0.63
CDC27-212ENST00000570818 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
CDC27-212ENST00000570818 GRIK4Q16099 956 aa11.09□□□□□ -0.63
CDC27-212ENST00000570818 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
CDC27-212ENST00000570818 SPOCK3Q9BQ16 436 aa11.09□□□□□ -0.63
CDC27-212ENST00000570818 CHRDQ9H2X0 955 aa11.09□□□□□ -0.63
CDC27-212ENST00000570818 FOXD3Q9UJU5 478 aaPredicted RBP11.09□□□□□ -0.63
CDC27-212ENST00000570818 PPME1Q9Y570 386 aa11.09□□□□□ -0.63
CDC27-212ENST00000570818 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
CDC27-212ENST00000570818 CDC27P30260 824 aa11.08□□□□□ -0.64
CDC27-212ENST00000570818 CHRNA4P43681 627 aa11.08□□□□□ -0.64
CDC27-212ENST00000570818 FAM117BQ6P1L5 589 aa11.08□□□□□ -0.64
CDC27-212ENST00000570818 LACRTQ9GZZ8 138 aa11.08□□□□□ -0.64
CDC27-212ENST00000570818 EREGO14944 169 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms