RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CCP110O43303 1012 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 FAM160A1Q05DH4 1040 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 CCDC93Q567U6 631 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 FSD1Q9BTV5 496 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMG6-207ENST00000570756 PNMA6AP0CW24 399 aaPredicted RBP18■□□□□ 0.47
SMG6-207ENST00000570756 TPM4P67936 248 aa18■□□□□ 0.47
SMG6-207ENST00000570756 PDE4CQ08493 712 aa18■□□□□ 0.47
SMG6-207ENST00000570756 AOPEPQ8N6M6 819 aa18■□□□□ 0.47
SMG6-207ENST00000570756 JCADQ9P266 1359 aa18■□□□□ 0.47
SMG6-207ENST00000570756 A0A0D9SFI3 127 aa18■□□□□ 0.47
SMG6-207ENST00000570756 EIF2S2P20042 333 aaKnown RBP18■□□□□ 0.47
SMG6-207ENST00000570756 E4F1Q66K89 784 aaPredicted RBP18■□□□□ 0.47
SMG6-207ENST00000570756 NAP1L2Q9ULW6 460 aaPredicted RBP18■□□□□ 0.47
SMG6-207ENST00000570756 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 SFPQP23246 707 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMG6-207ENST00000570756 COL9A3Q14050 684 aaPredicted RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 ARHGAP29Q52LW3 1261 aa17.99■□□□□ 0.47
SMG6-207ENST00000570756 NAA16Q6N069 864 aaPredicted RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
SMG6-207ENST00000570756 SYT10Q6XYQ8 523 aa17.99■□□□□ 0.47
SMG6-207ENST00000570756 IPO4Q8TEX9 1081 aaKnown RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 ZNF396Q96N95 335 aaPredicted RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 LLPHQ9BRT6 129 aaKnown RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
SMG6-207ENST00000570756 CEBPZQ03701 1054 aaKnown RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 C9orf78Q9NZ63 289 aaPredicted RBP17.99■□□□□ 0.47
SMG6-207ENST00000570756 ZRSR1Q15695 479 aaKnown RBP17.98■□□□□ 0.47
SMG6-207ENST00000570756 UBXN4Q92575 508 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 SRRTQ9BXP5 876 aaKnown RBP17.98■□□□□ 0.47
SMG6-207ENST00000570756 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.98■□□□□ 0.47
SMG6-207ENST00000570756 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 TPM1P09493 284 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 NBPF11Q86T75 865 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 GOLPH3LQ9H4A5 285 aa17.98■□□□□ 0.47
SMG6-207ENST00000570756 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 VGLL3A8MV65 326 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 ALDH1L1O75891 902 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 ADD1P35611 737 aaKnown RBP17.97■□□□□ 0.47
SMG6-207ENST00000570756 ENGASEQ8NFI3 743 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 ZNF335Q9H4Z2 1342 aaPredicted RBP17.97■□□□□ 0.47
SMG6-207ENST00000570756 ATP8B1O43520 1251 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 HNRNPH2P55795 449 aaKnown RBP17.97■□□□□ 0.47
SMG6-207ENST00000570756 NUTM2GQ5VZR2 741 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 PHLPP2Q6ZVD8 1323 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 TXLNBQ8N3L3 684 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 BPIFA3Q9BQP9 254 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
SMG6-207ENST00000570756 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
SMG6-207ENST00000570756 G3BP1Q13283 466 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMG6-207ENST00000570756 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
SMG6-207ENST00000570756 HOMER1Q86YM7 354 aa17.96■□□□□ 0.47
SMG6-207ENST00000570756 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
SMG6-207ENST00000570756 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
SMG6-207ENST00000570756 ZRANB2O95218 330 aaKnown RBP eCLIP17.96■□□□□ 0.46
SMG6-207ENST00000570756 SMC2O95347 1197 aa17.96■□□□□ 0.46
SMG6-207ENST00000570756 PLA2G4AP47712 749 aa17.96■□□□□ 0.46
SMG6-207ENST00000570756 FSIP1Q8NA03 581 aa17.96■□□□□ 0.46
SMG6-207ENST00000570756 ME1P48163 572 aa17.95■□□□□ 0.46
SMG6-207ENST00000570756 ETF1P62495 437 aaKnown RBP17.95■□□□□ 0.46
SMG6-207ENST00000570756 Q6ZUG5 572 aa17.95■□□□□ 0.46
SMG6-207ENST00000570756 TMC6Q7Z403 805 aa17.95■□□□□ 0.46
SMG6-207ENST00000570756 MNS1Q8NEH6 495 aa17.95■□□□□ 0.46
SMG6-207ENST00000570756 TAF5LO75529 589 aa17.94■□□□□ 0.46
SMG6-207ENST00000570756 CAPN2P17655 700 aa17.94■□□□□ 0.46
SMG6-207ENST00000570756 EIF4A1P60842 406 aaKnown RBP17.94■□□□□ 0.46
SMG6-207ENST00000570756 EAF2Q96CJ1 260 aaPredicted RBP17.94■□□□□ 0.46
SMG6-207ENST00000570756 ORC3Q9UBD5 711 aaPredicted RBP17.94■□□□□ 0.46
SMG6-207ENST00000570756 GPS2Q13227 327 aa17.94■□□□□ 0.46
SMG6-207ENST00000570756 ARMCX5Q6P1M9 558 aa17.94■□□□□ 0.46
SMG6-207ENST00000570756 SDF4Q9BRK5 362 aa17.94■□□□□ 0.46
SMG6-207ENST00000570756 XPO4Q9C0E2 1151 aaKnown RBP17.94■□□□□ 0.46
SMG6-207ENST00000570756 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
SMG6-207ENST00000570756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.93■□□□□ 0.46
SMG6-207ENST00000570756 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
SMG6-207ENST00000570756 MRPS27Q92552 414 aaKnown RBP17.93■□□□□ 0.46
SMG6-207ENST00000570756 USP28Q96RU2 1077 aa17.93■□□□□ 0.46
SMG6-207ENST00000570756 CCDC8Q9H0W5 538 aaPredicted RBP17.93■□□□□ 0.46
SMG6-207ENST00000570756 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.93■□□□□ 0.46
SMG6-207ENST00000570756 SCRN1Q12765 414 aa17.93■□□□□ 0.46
SMG6-207ENST00000570756 LRRN4CLQ8ND94 238 aa17.93■□□□□ 0.46
SMG6-207ENST00000570756 IFNKQ9P0W0 207 aa17.93■□□□□ 0.46
SMG6-207ENST00000570756 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
SMG6-207ENST00000570756 PFKFB2O60825 505 aa17.92■□□□□ 0.46
SMG6-207ENST00000570756 MUM1L1Q5H9M0 696 aa17.92■□□□□ 0.46
SMG6-207ENST00000570756 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
SMG6-207ENST00000570756 EFCAB8A8MWE9 144 aa17.92■□□□□ 0.46
SMG6-207ENST00000570756 SASH1O94885 1247 aa17.92■□□□□ 0.46
SMG6-207ENST00000570756 DNAI1Q9UI46 699 aa17.92■□□□□ 0.46
SMG6-207ENST00000570756 A0A087WWV3 80 aa17.91■□□□□ 0.46
SMG6-207ENST00000570756 HMGB1P09429 215 aaKnown RBP17.91■□□□□ 0.46
SMG6-207ENST00000570756 RAD51AP2Q09MP3 1159 aa17.91■□□□□ 0.46
SMG6-207ENST00000570756 FMR1NBQ8N0W7 255 aaPredicted RBP17.91■□□□□ 0.46
SMG6-207ENST00000570756 FTOQ9C0B1 505 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMG6-207ENST00000570756 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
SMG6-207ENST00000570756 CCDC158Q5M9N0 1113 aa17.91■□□□□ 0.46
SMG6-207ENST00000570756 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms