RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 BSDC1Q9NW68 430 aaPredicted RBP12.36□□□□□ -0.43
TRIM25-204ENST00000570749 POLLQ9UGP5 575 aa12.36□□□□□ -0.43
TRIM25-204ENST00000570749 THSD7BQ9C0I4 1608 aa12.36□□□□□ -0.43
TRIM25-204ENST00000570749 MED23Q9ULK4 1368 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 YDJCA8MPS7 323 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 ECE2O60344 883 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 RAD17O75943 681 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 UFL1O94874 794 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 MMP14P50281 582 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 GCKRQ14397 625 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 TTLL11Q8NHH1 800 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 CNOT7Q9UIV1 285 aaKnown RBP12.35□□□□□ -0.43
TRIM25-204ENST00000570749 COL4A1P02462 1669 aa12.35□□□□□ -0.43
TRIM25-204ENST00000570749 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 HSPA1AP0DMV8 641 aaKnown RBP12.34□□□□□ -0.43
TRIM25-204ENST00000570749 HSPA1BP0DMV9 641 aaKnown RBP12.34□□□□□ -0.43
TRIM25-204ENST00000570749 IGHMBP2P38935 993 aaKnown RBP12.34□□□□□ -0.43
TRIM25-204ENST00000570749 ECE1P42892 770 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
TRIM25-204ENST00000570749 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
TRIM25-204ENST00000570749 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 PODNQ7Z5L7 613 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 HHIPL1Q96JK4 782 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 SEC31BQ9NQW1 1179 aa12.34□□□□□ -0.43
TRIM25-204ENST00000570749 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
TRIM25-204ENST00000570749 PSMD14O00487 310 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 VIL1P09327 827 aaKnown RBP12.33□□□□□ -0.44
TRIM25-204ENST00000570749 G2E3Q7L622 706 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 UBE3BQ7Z3V4 1068 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 AIDAQ96BJ3 306 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
TRIM25-204ENST00000570749 LEMD3Q9Y2U8 911 aa12.33□□□□□ -0.44
TRIM25-204ENST00000570749 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
TRIM25-204ENST00000570749 CSF1RP07333 972 aa12.32□□□□□ -0.44
TRIM25-204ENST00000570749 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
TRIM25-204ENST00000570749 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
TRIM25-204ENST00000570749 GREM2Q9H772 168 aa12.32□□□□□ -0.44
TRIM25-204ENST00000570749 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
TRIM25-204ENST00000570749 MYO3BQ8WXR4 1341 aa12.32□□□□□ -0.44
TRIM25-204ENST00000570749 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
TRIM25-204ENST00000570749 E9PSI1 815 aa12.31□□□□□ -0.44
TRIM25-204ENST00000570749 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
TRIM25-204ENST00000570749 VEGFBP49765 207 aa12.31□□□□□ -0.44
TRIM25-204ENST00000570749 CASP7P55210 303 aa12.31□□□□□ -0.44
TRIM25-204ENST00000570749 MINPP1Q9UNW1 487 aa12.31□□□□□ -0.44
TRIM25-204ENST00000570749 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-204ENST00000570749 TLL2Q9Y6L7 1015 aa12.31□□□□□ -0.44
TRIM25-204ENST00000570749 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
TRIM25-204ENST00000570749 ANKRD18BA2A2Z9 1011 aa12.3□□□□□ -0.44
TRIM25-204ENST00000570749 ITGA6P23229 1130 aa12.3□□□□□ -0.44
TRIM25-204ENST00000570749 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
TRIM25-204ENST00000570749 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
TRIM25-204ENST00000570749 RSBN1LQ6PCB5 846 aaPredicted RBP12.3□□□□□ -0.44
TRIM25-204ENST00000570749 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
TRIM25-204ENST00000570749 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
TRIM25-204ENST00000570749 WDR33Q9C0J8 1336 aaKnown RBP12.3□□□□□ -0.44
TRIM25-204ENST00000570749 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
TRIM25-204ENST00000570749 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 MAP2K2P36507 400 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 CTCFP49711 727 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-204ENST00000570749 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-204ENST00000570749 BEND3Q5T5X7 828 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 JARID2Q92833 1246 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-204ENST00000570749 DCPSQ96C86 337 aaKnown RBP12.29□□□□□ -0.44
TRIM25-204ENST00000570749 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-204ENST00000570749 PTPRCP08575 1304 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 PITPNM2Q9BZ72 1349 aa12.29□□□□□ -0.44
TRIM25-204ENST00000570749 GRM8O00222 908 aa12.28□□□□□ -0.44
TRIM25-204ENST00000570749 CELF2O95319 508 aaKnown RBP12.28□□□□□ -0.44
TRIM25-204ENST00000570749 HIRAP54198 1017 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-204ENST00000570749 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
TRIM25-204ENST00000570749 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
TRIM25-204ENST00000570749 FAM161AQ3B820 660 aa12.28□□□□□ -0.44
TRIM25-204ENST00000570749 CST9Q5W186 159 aa12.28□□□□□ -0.44
TRIM25-204ENST00000570749 BEGAINQ9BUH8 593 aa12.28□□□□□ -0.44
TRIM25-204ENST00000570749 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
TRIM25-204ENST00000570749 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-204ENST00000570749 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
TRIM25-204ENST00000570749 CCER2I3L3R5 266 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 TRAF5O00463 557 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 CA12O43570 354 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.45
TRIM25-204ENST00000570749 USP17L8P0C7I0 530 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 KCNJ4P48050 445 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 STRIP1Q5VSL9 837 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 KRT26Q7Z3Y9 468 aa12.27□□□□□ -0.45
TRIM25-204ENST00000570749 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms