RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 LAMB1P07942 1786 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-221ENST00000570626 SPRYD7Q5W111 196 aa13.05□□□□□ -0.32
RBFOX1-221ENST00000570626 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
RBFOX1-221ENST00000570626 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
RBFOX1-221ENST00000570626 PTCH2Q9Y6C5 1203 aa13.05□□□□□ -0.32
RBFOX1-221ENST00000570626 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBFOX1-221ENST00000570626 COL9A1P20849 921 aa13.04□□□□□ -0.32
RBFOX1-221ENST00000570626 PTPN12Q05209 780 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-221ENST00000570626 TAF1P21675 1872 aa13.04□□□□□ -0.32
RBFOX1-221ENST00000570626 ANKRD36CQ5JPF3 1778 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 ECE2O60344 883 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 BBOX1O75936 387 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 NBPF11Q86T75 865 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
RBFOX1-221ENST00000570626 EYSQ5T1H1 3165 aa13.02□□□□□ -0.32
RBFOX1-221ENST00000570626 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 CRHR2Q13324 411 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 WASHC4Q2M389 1173 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 MTMR10Q9NXD2 777 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.33
RBFOX1-221ENST00000570626 MANSC4A6NHS7 340 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 ZBTB22O15209 634 aa13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 VIL1P09327 827 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 SP3Q02447 781 aa13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 RAPGEFL1Q9UHV5 662 aa13.01□□□□□ -0.33
RBFOX1-221ENST00000570626 ZNF646O15015 1829 aaPredicted RBP13□□□□□ -0.33
RBFOX1-221ENST00000570626 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
RBFOX1-221ENST00000570626 UBE2Q1Q7Z7E8 422 aa13□□□□□ -0.33
RBFOX1-221ENST00000570626 MORC1Q86VD1 984 aa13□□□□□ -0.33
RBFOX1-221ENST00000570626 NR2E3Q9Y5X4 410 aa13□□□□□ -0.33
RBFOX1-221ENST00000570626 INHBEP58166 350 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 PRKG1Q13976 671 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 ZNF34Q8IZ26 560 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 HTATIP2Q9BUP3 242 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 ZSWIM8A7E2V4 1837 aa12.99□□□□□ -0.33
RBFOX1-221ENST00000570626 PSME4Q14997 1843 aa12.98□□□□□ -0.33
RBFOX1-221ENST00000570626 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
RBFOX1-221ENST00000570626 NF2P35240 595 aa12.98□□□□□ -0.33
RBFOX1-221ENST00000570626 GRAPQ13588 217 aa12.98□□□□□ -0.33
RBFOX1-221ENST00000570626 SLC10A5Q5PT55 438 aa12.98□□□□□ -0.33
RBFOX1-221ENST00000570626 GRAPLQ8TC17 118 aaPredicted RBP12.98□□□□□ -0.33
RBFOX1-221ENST00000570626 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
RBFOX1-221ENST00000570626 PLA2G5P39877 138 aa12.97□□□□□ -0.33
RBFOX1-221ENST00000570626 KIF6Q6ZMV9 814 aa12.97□□□□□ -0.33
RBFOX1-221ENST00000570626 ARMC9Q7Z3E5 817 aa12.97□□□□□ -0.33
RBFOX1-221ENST00000570626 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
RBFOX1-221ENST00000570626 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
RBFOX1-221ENST00000570626 COL4A1P02462 1669 aa12.96□□□□□ -0.33
RBFOX1-221ENST00000570626 PRUNE2Q8WUY3 3088 aa12.96□□□□□ -0.33
RBFOX1-221ENST00000570626 MTFR1Q15390 333 aa12.96□□□□□ -0.33
RBFOX1-221ENST00000570626 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.33
RBFOX1-221ENST00000570626 GAS2L2Q8NHY3 880 aa12.96□□□□□ -0.33
RBFOX1-221ENST00000570626 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
RBFOX1-221ENST00000570626 FZD1Q9UP38 647 aa12.96□□□□□ -0.33
RBFOX1-221ENST00000570626 TTC28Q96AY4 2481 aa12.96□□□□□ -0.34
RBFOX1-221ENST00000570626 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 ZBTB48P10074 688 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 NBPF9Q3BBW0 867 aa12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 RSBN1LQ6PCB5 846 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 AGBL3Q8NEM8 1001 aa12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 GMLQ99445 158 aa12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 ANGEL1Q9UNK9 670 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 NSFL1CQ9UNZ2 370 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-221ENST00000570626 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-221ENST00000570626 GPSM2P81274 684 aa12.94□□□□□ -0.34
RBFOX1-221ENST00000570626 PARP10Q53GL7 1025 aa12.94□□□□□ -0.34
RBFOX1-221ENST00000570626 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
RBFOX1-221ENST00000570626 CLMNQ96JQ2 1002 aa12.94□□□□□ -0.34
RBFOX1-221ENST00000570626 PTPN18Q99952 460 aa12.94□□□□□ -0.34
RBFOX1-221ENST00000570626 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-221ENST00000570626 RPTORQ8N122 1335 aa12.93□□□□□ -0.34
RBFOX1-221ENST00000570626 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
RBFOX1-221ENST00000570626 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-221ENST00000570626 NECTIN2Q92692 538 aa12.93□□□□□ -0.34
RBFOX1-221ENST00000570626 SLC10A4Q96EP9 437 aa12.93□□□□□ -0.34
RBFOX1-221ENST00000570626 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
RBFOX1-221ENST00000570626 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
RBFOX1-221ENST00000570626 GJA5P36382 358 aa12.92□□□□□ -0.34
RBFOX1-221ENST00000570626 ARHGEF6Q15052 776 aa12.92□□□□□ -0.34
RBFOX1-221ENST00000570626 LRIT3Q3SXY7 679 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms