RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 CD46P15529 392 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 FAM193AP78312 1265 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 DMTNQ08495 405 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 FOXD4Q12950 439 aaPredicted RBP9.71□□□□□ -0.86
TCF4-246ENST00000570287 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 IRF2BPLQ9H1B7 796 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 USP54Q70EL1 1684 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 CEP170BQ9Y4F5 1589 aaPredicted RBP9.71□□□□□ -0.86
TCF4-246ENST00000570287 RASA1P20936 1047 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 PLEKHG6Q3KR16 790 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 TMEM51Q9NW97 253 aa9.71□□□□□ -0.86
TCF4-246ENST00000570287 CRB1P82279 1406 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 CLGNO14967 610 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 PTMSP20962 102 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 SKOR2Q2VWA4 1001 aaPredicted RBP9.7□□□□□ -0.86
TCF4-246ENST00000570287 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 MKNK1Q9BUB5 465 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 PCDH12Q9NPG4 1184 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 SKIP12755 728 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 MCM10Q7L590 875 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 IGSF1Q8N6C5 1336 aa9.7□□□□□ -0.86
TCF4-246ENST00000570287 DYNC1I1O14576 645 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 CBLBQ13191 982 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 NCOA4Q13772 614 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 INTS3Q68E01 1043 aaKnown RBP9.69□□□□□ -0.86
TCF4-246ENST00000570287 KCNA6P17658 529 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 AMPHP49418 695 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 FAM196BA6NMK8 535 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 ZNF746Q6NUN9 644 aaPredicted RBP9.69□□□□□ -0.86
TCF4-246ENST00000570287 NME8Q8N427 588 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 C22orf23Q9BZE7 217 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 CCSER2Q9H7U1 834 aa9.69□□□□□ -0.86
TCF4-246ENST00000570287 PTPRCP08575 1304 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 MAFGO15525 162 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 ZNF394Q53GI3 561 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 BMP2KLQ5H9B9 411 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 SIRT2Q8IXJ6 389 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 PITPNM1O00562 1244 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 HTATSF1O43719 755 aaKnown RBP9.68□□□□□ -0.86
TCF4-246ENST00000570287 OATP04181 439 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 MTHFSDQ2M296 383 aaKnown RBP9.68□□□□□ -0.86
TCF4-246ENST00000570287 CLEC17AQ6ZS10 378 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 RTF1Q92541 710 aaKnown RBP9.68□□□□□ -0.86
TCF4-246ENST00000570287 EYA1Q99502 592 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
TCF4-246ENST00000570287 MARF1Q9Y4F3 1742 aaKnown RBP9.68□□□□□ -0.86
TCF4-246ENST00000570287 RGS12O14924 1447 aa9.68□□□□□ -0.86
TCF4-246ENST00000570287 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
TCF4-246ENST00000570287 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 DPYDQ12882 1025 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 TUSC1Q2TAM9 212 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 FMNL3Q8IVF7 1028 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.67□□□□□ -0.86
TCF4-246ENST00000570287 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 PHF14O94880 888 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 TBX4P57082 545 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 RAB3GAP1Q15042 981 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 RAVER1Q8IY67 606 aaKnown RBP9.67□□□□□ -0.86
TCF4-246ENST00000570287 ZNF622Q969S3 477 aaKnown RBP eCLIP9.67□□□□□ -0.86
TCF4-246ENST00000570287 SNX21Q969T3 373 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 PDLIM2Q96JY6 352 aa9.67□□□□□ -0.86
TCF4-246ENST00000570287 CHD2O14647 1828 aaKnown RBP9.67□□□□□ -0.86
TCF4-246ENST00000570287 ICMTO60725 284 aa9.66□□□□□ -0.86
TCF4-246ENST00000570287 KRT24Q2M2I5 525 aa9.66□□□□□ -0.86
TCF4-246ENST00000570287 DCTN4Q9UJW0 460 aa9.66□□□□□ -0.86
TCF4-246ENST00000570287 CCDC94Q9BW85 323 aaPredicted RBP9.66□□□□□ -0.86
TCF4-246ENST00000570287 DNMT3AQ9Y6K1 912 aaPredicted RBP9.66□□□□□ -0.86
TCF4-246ENST00000570287 ZNF142P52746 1687 aaPredicted RBP9.66□□□□□ -0.86
TCF4-246ENST00000570287 IBSPP21815 317 aaPredicted RBP9.65□□□□□ -0.86
TCF4-246ENST00000570287 HOXC9P31274 260 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 RPAP2Q8IXW5 612 aaPredicted RBP9.65□□□□□ -0.86
TCF4-246ENST00000570287 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
TCF4-246ENST00000570287 DCTPP1Q9H773 170 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 FAM13BQ9NYF5 915 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 TSPYL4Q9UJ04 414 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 PCDHGA10Q9Y5H3 936 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 LRRC37A3O60309 1634 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 HOXA2O43364 376 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 FOXO3O43524 673 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 MSNP26038 577 aaKnown RBP9.65□□□□□ -0.86
TCF4-246ENST00000570287 NASPP49321 788 aaPredicted RBP9.65□□□□□ -0.86
TCF4-246ENST00000570287 CCDC181Q5TID7 509 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 TMEM92Q6UXU6 159 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 ANKLE2Q86XL3 938 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 OSBPL2Q9H1P3 480 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
TCF4-246ENST00000570287 MCM5P33992 734 aa9.65□□□□□ -0.87
TCF4-246ENST00000570287 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.87
TCF4-246ENST00000570287 WWC3Q9ULE0 1092 aa9.65□□□□□ -0.87
TCF4-246ENST00000570287 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
TCF4-246ENST00000570287 UQCRHLA0A096LP55 91 aa9.64□□□□□ -0.87
TCF4-246ENST00000570287 UQCRHP07919 91 aa9.64□□□□□ -0.87
TCF4-246ENST00000570287 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
TCF4-246ENST00000570287 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
TCF4-246ENST00000570287 MCCD1P59942 119 aaPredicted RBP9.64□□□□□ -0.87
TCF4-246ENST00000570287 CLDN10P78369 228 aa9.64□□□□□ -0.87
TCF4-246ENST00000570287 GBP4Q96PP9 640 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms