RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
CAPN3-220ENST00000569827 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
CAPN3-220ENST00000569827 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.11
CAPN3-220ENST00000569827 ZC3H15Q8WU90 426 aaKnown RBP15.71■□□□□ 0.11
CAPN3-220ENST00000569827 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
CAPN3-220ENST00000569827 DBF4Q9UBU7 674 aaPredicted RBP15.71■□□□□ 0.11
CAPN3-220ENST00000569827 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.11
CAPN3-220ENST00000569827 BRPF1P55201 1214 aaPredicted RBP15.7■□□□□ 0.1
CAPN3-220ENST00000569827 TMC4Q7Z404 712 aa15.7■□□□□ 0.1
CAPN3-220ENST00000569827 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
CAPN3-220ENST00000569827 MYD88Q99836 296 aa15.7■□□□□ 0.1
CAPN3-220ENST00000569827 SCAF8Q9UPN6 1271 aaKnown RBP15.7■□□□□ 0.1
CAPN3-220ENST00000569827 UFL1O94874 794 aa15.69■□□□□ 0.1
CAPN3-220ENST00000569827 DGKZQ13574 1117 aa15.69■□□□□ 0.1
CAPN3-220ENST00000569827 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
CAPN3-220ENST00000569827 RIC3Q7Z5B4 369 aa15.69■□□□□ 0.1
CAPN3-220ENST00000569827 HHIPL1Q96JK4 782 aa15.69■□□□□ 0.1
CAPN3-220ENST00000569827 FAM155AB1AL88 458 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-220ENST00000569827 RPS8P62241 208 aaKnown RBP15.68■□□□□ 0.1
CAPN3-220ENST00000569827 DPF2Q92785 391 aa15.68■□□□□ 0.1
CAPN3-220ENST00000569827 GBA2Q9HCG7 927 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-220ENST00000569827 HYPKQ9NX55 129 aa15.68■□□□□ 0.1
CAPN3-220ENST00000569827 GGA3Q9NZ52 723 aa15.68■□□□□ 0.1
CAPN3-220ENST00000569827 WTIPA6NIX2 430 aaPredicted RBP15.67■□□□□ 0.1
CAPN3-220ENST00000569827 MLLT1Q03111 559 aaPredicted RBP15.67■□□□□ 0.1
CAPN3-220ENST00000569827 NOGQ13253 232 aa15.67■□□□□ 0.1
CAPN3-220ENST00000569827 RGMBQ6NW40 437 aa15.67■□□□□ 0.1
CAPN3-220ENST00000569827 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
CAPN3-220ENST00000569827 ANKIB1Q9P2G1 1089 aa15.67■□□□□ 0.1
CAPN3-220ENST00000569827 HOXB7P09629 217 aa15.66■□□□□ 0.1
CAPN3-220ENST00000569827 KIF23Q02241 960 aaPredicted RBP15.66■□□□□ 0.1
CAPN3-220ENST00000569827 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
CAPN3-220ENST00000569827 EYA3Q99504 573 aa15.66■□□□□ 0.1
CAPN3-220ENST00000569827 A0A1B0GUL6 1792 aa15.65■□□□□ 0.1
CAPN3-220ENST00000569827 G3V3G9 751 aa15.65■□□□□ 0.1
CAPN3-220ENST00000569827 APAF1O14727 1248 aa15.65■□□□□ 0.1
CAPN3-220ENST00000569827 CA12O43570 354 aa15.65■□□□□ 0.1
CAPN3-220ENST00000569827 ZNF157P51786 506 aaPredicted RBP15.65■□□□□ 0.1
CAPN3-220ENST00000569827 DCAF8Q5TAQ9 597 aa15.65■□□□□ 0.1
CAPN3-220ENST00000569827 ZBTB38Q8NAP3 1195 aaPredicted RBP15.65■□□□□ 0.1
CAPN3-220ENST00000569827 PAPPA2Q9BXP8 1791 aa15.64■□□□□ 0.1
CAPN3-220ENST00000569827 RPS12P25398 132 aaKnown RBP15.64■□□□□ 0.09
CAPN3-220ENST00000569827 ANGEL2Q5VTE6 544 aaKnown RBP15.64■□□□□ 0.09
CAPN3-220ENST00000569827 C2orf69Q8N8R5 385 aa15.64■□□□□ 0.09
CAPN3-220ENST00000569827 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
CAPN3-220ENST00000569827 CDCA5Q96FF9 252 aa15.64■□□□□ 0.09
CAPN3-220ENST00000569827 ZC3H12CQ9C0D7 883 aaKnown RBP15.64■□□□□ 0.09
CAPN3-220ENST00000569827 GGA1Q9UJY5 639 aa15.64■□□□□ 0.09
CAPN3-220ENST00000569827 TRPA1O75762 1119 aa15.63■□□□□ 0.09
CAPN3-220ENST00000569827 VIL1P09327 827 aaKnown RBP15.63■□□□□ 0.09
CAPN3-220ENST00000569827 ZNF853P0CG23 659 aa15.63■□□□□ 0.09
CAPN3-220ENST00000569827 TRIM28Q13263 835 aaKnown RBP15.63■□□□□ 0.09
CAPN3-220ENST00000569827 SCARF1Q14162 830 aa15.63■□□□□ 0.09
CAPN3-220ENST00000569827 MOB2Q70IA6 237 aa15.63■□□□□ 0.09
CAPN3-220ENST00000569827 SULF1Q8IWU6 871 aa15.63■□□□□ 0.09
CAPN3-220ENST00000569827 MXD3Q9BW11 206 aa15.63■□□□□ 0.09
CAPN3-220ENST00000569827 CCDC152Q4G0S7 254 aa15.62■□□□□ 0.09
CAPN3-220ENST00000569827 PRAMEF18Q5VWM3 479 aa15.62■□□□□ 0.09
CAPN3-220ENST00000569827 RSBN1LQ6PCB5 846 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-220ENST00000569827 CWC25Q9NXE8 425 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-220ENST00000569827 RNF186Q9NXI6 227 aa15.62■□□□□ 0.09
CAPN3-220ENST00000569827 PODXL2Q9NZ53 605 aa15.62■□□□□ 0.09
CAPN3-220ENST00000569827 PDE8AO60658 829 aa15.61■□□□□ 0.09
CAPN3-220ENST00000569827 PCCAP05165 728 aaPredicted RBP15.61■□□□□ 0.09
CAPN3-220ENST00000569827 SLC10A3P09131 477 aa15.61■□□□□ 0.09
CAPN3-220ENST00000569827 RGS19P49795 217 aa15.61■□□□□ 0.09
CAPN3-220ENST00000569827 SOX10P56693 466 aa15.61■□□□□ 0.09
CAPN3-220ENST00000569827 TSPYL6Q8N831 410 aa15.61■□□□□ 0.09
CAPN3-220ENST00000569827 MAP3K2Q9Y2U5 619 aa15.61■□□□□ 0.09
CAPN3-220ENST00000569827 ECM29Q5VYK3 1845 aa15.61■□□□□ 0.09
CAPN3-220ENST00000569827 RASAL3Q86YV0 1011 aa15.6■□□□□ 0.09
CAPN3-220ENST00000569827 ANKRD18AQ8IVF6 992 aa15.6■□□□□ 0.09
CAPN3-220ENST00000569827 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
CAPN3-220ENST00000569827 FBXW7Q969H0 707 aa15.6■□□□□ 0.09
CAPN3-220ENST00000569827 METTL22Q9BUU2 404 aaPredicted RBP15.6■□□□□ 0.09
CAPN3-220ENST00000569827 IFT57Q9NWB7 429 aa15.6■□□□□ 0.09
CAPN3-220ENST00000569827 XDHP47989 1333 aa15.6■□□□□ 0.09
CAPN3-220ENST00000569827 CACNA1FO60840 1977 aa15.59■□□□□ 0.09
CAPN3-220ENST00000569827 SLC34A2O95436 690 aa15.59■□□□□ 0.09
CAPN3-220ENST00000569827 ZNF280AP59817 542 aaPredicted RBP15.59■□□□□ 0.09
CAPN3-220ENST00000569827 GNAI1P63096 354 aa15.59■□□□□ 0.09
CAPN3-220ENST00000569827 TSR2Q969E8 191 aaKnown RBP15.59■□□□□ 0.09
CAPN3-220ENST00000569827 CCDC102AQ96A19 550 aa15.59■□□□□ 0.09
CAPN3-220ENST00000569827 CSRNP1Q96S65 589 aa15.59■□□□□ 0.09
CAPN3-220ENST00000569827 GREM2Q9H772 168 aa15.59■□□□□ 0.09
CAPN3-220ENST00000569827 MYOZ2Q9NPC6 264 aa15.59■□□□□ 0.09
CAPN3-220ENST00000569827 IGKV5-2P06315 115 aa15.58■□□□□ 0.08
CAPN3-220ENST00000569827 CTSWP56202 376 aa15.58■□□□□ 0.08
CAPN3-220ENST00000569827 CWF19L2Q2TBE0 894 aaKnown RBP15.58■□□□□ 0.08
CAPN3-220ENST00000569827 NBPF9Q3BBW0 867 aa15.58■□□□□ 0.08
CAPN3-220ENST00000569827 GMLQ99445 158 aa15.58■□□□□ 0.08
CAPN3-220ENST00000569827 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
CAPN3-220ENST00000569827 USP17L8P0C7I0 530 aa15.57■□□□□ 0.08
CAPN3-220ENST00000569827 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
CAPN3-220ENST00000569827 AGBL3Q8NEM8 1001 aa15.57■□□□□ 0.08
CAPN3-220ENST00000569827 ZNF609O15014 1411 aa15.57■□□□□ 0.08
CAPN3-220ENST00000569827 PI4KAP2A4QPH2 592 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 USP17L3A6NCW0 530 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 USP17L4A6NCW7 530 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 UBE2Q2LH0YL09 131 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms