RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
CDH13-214ENST00000569455 ECHDC1Q9NTX5 307 aa9.34□□□□□ -0.91
CDH13-214ENST00000569455 SRP68Q9UHB9 627 aaKnown RBP9.34□□□□□ -0.91
CDH13-214ENST00000569455 RTL9Q8NET4 1388 aa9.34□□□□□ -0.91
CDH13-214ENST00000569455 POLRMTO00411 1230 aaKnown RBP9.33□□□□□ -0.92
CDH13-214ENST00000569455 TOMM70O94826 608 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 HCLS1P14317 486 aaPredicted RBP9.33□□□□□ -0.92
CDH13-214ENST00000569455 SDSP20132 328 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 ITGA6P23229 1130 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 TFCP2Q12800 502 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 NFIXQ14938 502 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 TNNI3KQ59H18 835 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 SLC10A5Q5PT55 438 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 SMIM5Q71RC9 77 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 NBPF5PQ86XG9 351 aaPredicted RBP9.33□□□□□ -0.92
CDH13-214ENST00000569455 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 EAF2Q96CJ1 260 aaPredicted RBP9.33□□□□□ -0.92
CDH13-214ENST00000569455 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
CDH13-214ENST00000569455 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 AKAP2Q9Y2D5 859 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 FPGT-TNNI3KV9GXZ4 949 aa9.33□□□□□ -0.92
CDH13-214ENST00000569455 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 NPHP1O15259 732 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 TGFB2P61812 414 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 ERFEQ4G0M1 354 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 MSL1Q68DK7 614 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 ATG9AQ7Z3C6 839 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 ZNF594Q96JF6 807 aaPredicted RBP9.32□□□□□ -0.92
CDH13-214ENST00000569455 GREM2Q9H772 168 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 CNNM1Q9NRU3 951 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 WWC3Q9ULE0 1092 aa9.32□□□□□ -0.92
CDH13-214ENST00000569455 SPEF2Q9C093 1822 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 SERPINB2P05120 415 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 IGHMBP2P38935 993 aaKnown RBP9.31□□□□□ -0.92
CDH13-214ENST00000569455 DDR1Q08345 913 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 SF3B3Q15393 1217 aaKnown RBP9.31□□□□□ -0.92
CDH13-214ENST00000569455 LRRC24Q50LG9 513 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 TSHZ3Q63HK5 1081 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 LDHAL6AQ6ZMR3 332 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 TBC1D9Q6ZT07 1266 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 PI4K2BQ8TCG2 481 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 RILPL2Q969X0 211 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 CDC5LQ99459 802 aaKnown RBP9.31□□□□□ -0.92
CDH13-214ENST00000569455 MPHOSPH8Q99549 860 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 BRIP1Q9BX63 1249 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 CCDC8Q9H0W5 538 aaPredicted RBP9.31□□□□□ -0.92
CDH13-214ENST00000569455 ZNF609O15014 1411 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 RIC1Q4ADV7 1423 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 C10orf71Q711Q0 1435 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 MROH5Q6ZUA9 1318 aa9.31□□□□□ -0.92
CDH13-214ENST00000569455 PDE6BP35913 854 aa9.3□□□□□ -0.92
CDH13-214ENST00000569455 MFAP1P55081 439 aaKnown RBP9.3□□□□□ -0.92
CDH13-214ENST00000569455 ST5P78524 1137 aa9.3□□□□□ -0.92
CDH13-214ENST00000569455 METTL24Q5JXM2 366 aa9.3□□□□□ -0.92
CDH13-214ENST00000569455 CNBD1Q8NA66 436 aa9.3□□□□□ -0.92
CDH13-214ENST00000569455 NEUROD6Q96NK8 337 aa9.3□□□□□ -0.92
CDH13-214ENST00000569455 PUS3Q9BZE2 481 aaKnown RBP9.3□□□□□ -0.92
CDH13-214ENST00000569455 PCNTO95613 3336 aa9.3□□□□□ -0.92
CDH13-214ENST00000569455 REC8O95072 547 aa9.29□□□□□ -0.92
CDH13-214ENST00000569455 SEC24BO95487 1268 aa9.29□□□□□ -0.92
CDH13-214ENST00000569455 ATP5JP18859 108 aa9.29□□□□□ -0.92
CDH13-214ENST00000569455 EVI5LQ96CN4 794 aa9.29□□□□□ -0.92
CDH13-214ENST00000569455 DDRGK1Q96HY6 314 aa9.29□□□□□ -0.92
CDH13-214ENST00000569455 DBNLQ9UJU6 430 aaKnown RBP9.29□□□□□ -0.92
CDH13-214ENST00000569455 RIPOR2Q9Y4F9 1068 aa9.29□□□□□ -0.92
CDH13-214ENST00000569455 ARAP2Q8WZ64 1704 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 ABCC12Q96J65 1359 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 A0A1B0GUL7 405 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 KLRG2A4D1S0 409 aaPredicted RBP9.28□□□□□ -0.92
CDH13-214ENST00000569455 HIP1O00291 1037 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 ATP2B3Q16720 1220 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 CCDC158Q5M9N0 1113 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 GORABQ5T7V8 394 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 PRR5LQ6MZQ0 368 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 ANKRD18AQ8IVF6 992 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 DBNDD2Q9BQY9 259 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 C22orf23Q9BZE7 217 aa9.28□□□□□ -0.92
CDH13-214ENST00000569455 TLR7Q9NYK1 1049 aaKnown RBP9.28□□□□□ -0.92
CDH13-214ENST00000569455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.28□□□□□ -0.92
CDH13-214ENST00000569455 H0YIN7 160 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 PDE8BO95263 885 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 CHMLP26374 656 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 HTRA3P83110 453 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 PUM3Q15397 648 aaKnown RBP9.27□□□□□ -0.93
CDH13-214ENST00000569455 DDX46Q7L014 1031 aaKnown RBP9.27□□□□□ -0.93
CDH13-214ENST00000569455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDH13-214ENST00000569455 RUFY2Q8WXA3 655 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 BOLA2Q9H3K6 86 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 SEC31BQ9NQW1 1179 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 DIAPH3Q9NSV4 1193 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 A0A1B0GUL6 1792 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 DLEC1Q9Y238 1755 aa9.27□□□□□ -0.93
CDH13-214ENST00000569455 TNRC6CQ9HCJ0 1690 aaKnown RBP9.26□□□□□ -0.93
CDH13-214ENST00000569455 TAF1P21675 1872 aa9.26□□□□□ -0.93
CDH13-214ENST00000569455 BRCA1P38398 1863 aaKnown RBP9.26□□□□□ -0.93
CDH13-214ENST00000569455 MAP4K4O95819 1239 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms