RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 CABP4P57796 275 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
CDH13-212ENST00000569144 USPL1Q5W0Q7 1092 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 C2CD5Q86YS7 1000 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 POLR3EQ9NVU0 708 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 ADAMTS7Q9UKP4 1686 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 NRXN2Q9P2S2 1712 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 ST20-MTHFSA0A0A6YYL1 179 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 RASSF10A6NK89 507 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 H0YIN7 160 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 C6orf229H3BNL8 230 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
CDH13-212ENST00000569144 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
CDH13-212ENST00000569144 DDNO94850 711 aaPredicted RBP8.16□□□□□ -1.1
CDH13-212ENST00000569144 GJA5P36382 358 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 NFIXQ14938 502 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 CSPP1Q1MSJ5 1256 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 VIRMAQ69YN4 1812 aaKnown RBP8.16□□□□□ -1.1
CDH13-212ENST00000569144 PPP1R18Q6NYC8 613 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 INTS5Q6P9B9 1019 aaKnown RBP8.16□□□□□ -1.1
CDH13-212ENST00000569144 KIF20BQ96Q89 1820 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 SLC6A16Q9GZN6 736 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 LTBP3Q9NS15 1303 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 ANKRD26Q9UPS8 1709 aa8.16□□□□□ -1.1
CDH13-212ENST00000569144 TJP1Q07157 1748 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.1
CDH13-212ENST00000569144 S1PR4O95977 384 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 SERPINB2P05120 415 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 CLK2P49760 499 aaKnown RBP8.15□□□□□ -1.1
CDH13-212ENST00000569144 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 SH3D19Q5HYK7 790 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 FAM160A2Q8N612 972 aaPredicted RBP8.15□□□□□ -1.1
CDH13-212ENST00000569144 TAF1DQ9H5J8 278 aaPredicted RBP8.15□□□□□ -1.1
CDH13-212ENST00000569144 NARFQ9UHQ1 456 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 PCDHB15Q9Y5E8 787 aa8.15□□□□□ -1.1
CDH13-212ENST00000569144 CARMIL3Q8ND23 1372 aa8.14□□□□□ -1.11
CDH13-212ENST00000569144 WDR33Q9C0J8 1336 aaKnown RBP8.14□□□□□ -1.11
CDH13-212ENST00000569144 C21orf2O43822 256 aa8.14□□□□□ -1.11
CDH13-212ENST00000569144 GGCXP38435 758 aa8.14□□□□□ -1.11
CDH13-212ENST00000569144 PLEKHO1Q53GL0 409 aaPredicted RBP8.14□□□□□ -1.11
CDH13-212ENST00000569144 USB1Q9BQ65 265 aaKnown RBP8.14□□□□□ -1.11
CDH13-212ENST00000569144 TAOK3Q9H2K8 898 aa8.14□□□□□ -1.11
CDH13-212ENST00000569144 PRDM9Q9NQV7 894 aa8.14□□□□□ -1.11
CDH13-212ENST00000569144 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.14□□□□□ -1.11
CDH13-212ENST00000569144 COL15A1P39059 1388 aa8.13□□□□□ -1.11
CDH13-212ENST00000569144 AFDNP55196 1824 aaKnown RBP8.13□□□□□ -1.11
CDH13-212ENST00000569144 MTMR2Q13614 643 aa8.13□□□□□ -1.11
CDH13-212ENST00000569144 EIF4A2Q14240 407 aaKnown RBP8.13□□□□□ -1.11
CDH13-212ENST00000569144 SKIV2LQ15477 1246 aaKnown RBP8.13□□□□□ -1.11
CDH13-212ENST00000569144 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
CDH13-212ENST00000569144 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
CDH13-212ENST00000569144 DICER1Q9UPY3 1922 aaKnown RBP8.13□□□□□ -1.11
CDH13-212ENST00000569144 CCDC88AQ3V6T2 1871 aa8.13□□□□□ -1.11
CDH13-212ENST00000569144 THSD7BQ9C0I4 1608 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
CDH13-212ENST00000569144 MTHFSP49914 203 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 QPCTQ16769 361 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 AMOTQ4VCS5 1084 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 SOGA3Q5TF21 947 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 DNAJC10Q8IXB1 793 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 PROCA1Q8NCQ7 364 aaPredicted RBP8.12□□□□□ -1.11
CDH13-212ENST00000569144 ZNF622Q969S3 477 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH13-212ENST00000569144 ZBTB3Q9H5J0 574 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 POLKQ9UBT6 870 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 FER1L6Q2WGJ9 1857 aa8.12□□□□□ -1.11
CDH13-212ENST00000569144 SCN4AP35499 1836 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 CYP19A1P11511 503 aaPredicted RBP8.11□□□□□ -1.11
CDH13-212ENST00000569144 PDE6BP35913 854 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 TUSC1Q2TAM9 212 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
CDH13-212ENST00000569144 C1orf141Q5JVX7 400 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 CNTROBQ8N137 903 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 BRIP1Q9BX63 1249 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 HACL1Q9UJ83 578 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 ABT1Q9ULW3 272 aaKnown RBP8.11□□□□□ -1.11
CDH13-212ENST00000569144 ADAMTSL1Q8N6G6 1762 aa8.11□□□□□ -1.11
CDH13-212ENST00000569144 EPHX2P34913 555 aa8.1□□□□□ -1.11
CDH13-212ENST00000569144 ECE1P42892 770 aa8.1□□□□□ -1.11
CDH13-212ENST00000569144 CDCA8Q53HL2 280 aa8.1□□□□□ -1.11
CDH13-212ENST00000569144 PRPF38BQ5VTL8 546 aaKnown RBP8.1□□□□□ -1.11
CDH13-212ENST00000569144 PNMA8AQ86V59 439 aaPredicted RBP8.1□□□□□ -1.11
CDH13-212ENST00000569144 PRR7Q8TB68 274 aa8.1□□□□□ -1.11
CDH13-212ENST00000569144 CNKSR1Q969H4 720 aa8.1□□□□□ -1.11
CDH13-212ENST00000569144 MCOLN1Q9GZU1 580 aa8.1□□□□□ -1.11
CDH13-212ENST00000569144 ZBTB1Q9Y2K1 713 aa8.1□□□□□ -1.11
CDH13-212ENST00000569144 SPDYE5A6NIY4 337 aa8.09□□□□□ -1.11
CDH13-212ENST00000569144 MAP1SQ66K74 1059 aaPredicted RBP8.09□□□□□ -1.11
CDH13-212ENST00000569144 STYK1Q6J9G0 422 aa8.09□□□□□ -1.11
CDH13-212ENST00000569144 PRR5LQ6MZQ0 368 aa8.09□□□□□ -1.11
CDH13-212ENST00000569144 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
CDH13-212ENST00000569144 BICDL1Q6ZP65 573 aa8.09□□□□□ -1.11
CDH13-212ENST00000569144 CAPNS2Q96L46 248 aa8.09□□□□□ -1.11
CDH13-212ENST00000569144 GOPCQ9HD26 462 aa8.09□□□□□ -1.11
CDH13-212ENST00000569144 COL11A2P13942 1736 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms