RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 BHMTQ93088 406 aa9.06□□□□□ -0.96
UBR1-208ENST00000569066 DRC1Q96MC2 740 aa9.06□□□□□ -0.96
UBR1-208ENST00000569066 TRIM56Q9BRZ2 755 aaKnown RBP9.06□□□□□ -0.96
UBR1-208ENST00000569066 GPR25O00155 361 aa9.06□□□□□ -0.96
UBR1-208ENST00000569066 RGS20O76081 388 aa9.06□□□□□ -0.96
UBR1-208ENST00000569066 TAF1CQ15572 869 aaPredicted RBP9.06□□□□□ -0.96
UBR1-208ENST00000569066 FIGNL1Q6PIW4 674 aa9.06□□□□□ -0.96
UBR1-208ENST00000569066 GTPBP3Q969Y2 492 aaKnown RBP9.06□□□□□ -0.96
UBR1-208ENST00000569066 ZNF837Q96EG3 531 aaPredicted RBP9.06□□□□□ -0.96
UBR1-208ENST00000569066 EHD4Q9H223 541 aa9.06□□□□□ -0.96
UBR1-208ENST00000569066 DDX41Q9UJV9 622 aaKnown RBP9.06□□□□□ -0.96
UBR1-208ENST00000569066 METTL12A8MUP2 240 aa9.05□□□□□ -0.96
UBR1-208ENST00000569066 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
UBR1-208ENST00000569066 ITGAEP38570 1179 aa9.05□□□□□ -0.96
UBR1-208ENST00000569066 FCGRTP55899 365 aa9.05□□□□□ -0.96
UBR1-208ENST00000569066 HS2ST1Q7LGA3 356 aa9.05□□□□□ -0.96
UBR1-208ENST00000569066 PNMA5Q96PV4 448 aa9.05□□□□□ -0.96
UBR1-208ENST00000569066 ZKSCAN3Q9BRR0 538 aa9.05□□□□□ -0.96
UBR1-208ENST00000569066 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
UBR1-208ENST00000569066 ABCB6Q9NP58 842 aa9.04□□□□□ -0.96
UBR1-208ENST00000569066 MARK1Q9P0L2 795 aa9.04□□□□□ -0.96
UBR1-208ENST00000569066 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.04□□□□□ -0.96
UBR1-208ENST00000569066 GMPR2Q9P2T1 348 aaKnown RBP9.03□□□□□ -0.96
UBR1-208ENST00000569066 EDN3P14138 238 aa9.03□□□□□ -0.96
UBR1-208ENST00000569066 MLLT1Q03111 559 aaPredicted RBP9.03□□□□□ -0.96
UBR1-208ENST00000569066 LBRQ14739 615 aaKnown RBP9.03□□□□□ -0.96
UBR1-208ENST00000569066 NCAPG2Q86XI2 1143 aa9.03□□□□□ -0.96
UBR1-208ENST00000569066 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
UBR1-208ENST00000569066 TTF2Q9UNY4 1162 aaKnown RBP9.03□□□□□ -0.96
UBR1-208ENST00000569066 GIPC1O14908 333 aa9.02□□□□□ -0.96
UBR1-208ENST00000569066 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.96
UBR1-208ENST00000569066 ITGA6P23229 1130 aa9.02□□□□□ -0.96
UBR1-208ENST00000569066 KIAA0319Q5VV43 1072 aa9.02□□□□□ -0.96
UBR1-208ENST00000569066 TCF12Q99081 682 aa9.02□□□□□ -0.96
UBR1-208ENST00000569066 DNAJA1P31689 397 aaKnown RBP9.02□□□□□ -0.97
UBR1-208ENST00000569066 HFE2Q6ZVN8 426 aa9.02□□□□□ -0.97
UBR1-208ENST00000569066 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
UBR1-208ENST00000569066 TANGO6Q9C0B7 1094 aa9.02□□□□□ -0.97
UBR1-208ENST00000569066 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
UBR1-208ENST00000569066 C11orf16Q9NQ32 467 aa9.02□□□□□ -0.97
UBR1-208ENST00000569066 KBTBD4Q9NVX7 518 aa9.02□□□□□ -0.97
UBR1-208ENST00000569066 GRIA4P48058 902 aa9.01□□□□□ -0.97
UBR1-208ENST00000569066 PTPN12Q05209 780 aaKnown RBP9.01□□□□□ -0.97
UBR1-208ENST00000569066 DHX32Q7L7V1 743 aaKnown RBP9.01□□□□□ -0.97
UBR1-208ENST00000569066 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
UBR1-208ENST00000569066 OSMRQ99650 979 aa9.01□□□□□ -0.97
UBR1-208ENST00000569066 LIN7BQ9HAP6 207 aa9.01□□□□□ -0.97
UBR1-208ENST00000569066 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
UBR1-208ENST00000569066 GSTT1P30711 240 aa9.01□□□□□ -0.97
UBR1-208ENST00000569066 MAP3K10Q02779 954 aa9.01□□□□□ -0.97
UBR1-208ENST00000569066 IGFLR1Q9H665 355 aa9.01□□□□□ -0.97
UBR1-208ENST00000569066 H7C1W4 665 aa9□□□□□ -0.97
UBR1-208ENST00000569066 J3QW42 95 aa9□□□□□ -0.97
UBR1-208ENST00000569066 PSAPP07602 524 aa9□□□□□ -0.97
UBR1-208ENST00000569066 CTBSQ01459 385 aa9□□□□□ -0.97
UBR1-208ENST00000569066 ERMP1Q7Z2K6 904 aa9□□□□□ -0.97
UBR1-208ENST00000569066 AKAP2Q9Y2D5 859 aa9□□□□□ -0.97
UBR1-208ENST00000569066 INPP5FQ9Y2H2 1132 aa9□□□□□ -0.97
UBR1-208ENST00000569066 ZBTB42B2RXF5 422 aa9□□□□□ -0.97
UBR1-208ENST00000569066 ST13P50502 369 aaKnown RBP9□□□□□ -0.97
UBR1-208ENST00000569066 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
UBR1-208ENST00000569066 CDC14CA4D256 554 aa8.99□□□□□ -0.97
UBR1-208ENST00000569066 KIF4AO95239 1232 aa8.99□□□□□ -0.97
UBR1-208ENST00000569066 ATP11AP98196 1134 aa8.99□□□□□ -0.97
UBR1-208ENST00000569066 CEP120Q8N960 986 aa8.99□□□□□ -0.97
UBR1-208ENST00000569066 DHX38Q92620 1227 aaKnown RBP8.99□□□□□ -0.97
UBR1-208ENST00000569066 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
UBR1-208ENST00000569066 DNAJC2Q99543 621 aaKnown RBP8.99□□□□□ -0.97
UBR1-208ENST00000569066 DZANK1Q9NVP4 752 aa8.99□□□□□ -0.97
UBR1-208ENST00000569066 FGFR3P22607 806 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 CCDC85BQ15834 202 aaPredicted RBP8.98□□□□□ -0.97
UBR1-208ENST00000569066 MAP3K11Q16584 847 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 SPRED3Q2MJR0 410 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 ADAMTSL4Q6UY14 1074 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 SOX18P35713 384 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 TBC1D8BQ0IIM8 1120 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 SF3A1Q15459 793 aaKnown RBP8.98□□□□□ -0.97
UBR1-208ENST00000569066 TPTE2Q6XPS3 522 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 CCNJLQ8IV13 435 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 ATXN7L1Q9ULK2 861 aaPredicted RBP8.98□□□□□ -0.97
UBR1-208ENST00000569066 SHROOM4Q9ULL8 1493 aa8.98□□□□□ -0.97
UBR1-208ENST00000569066 NFKBIEO00221 500 aa8.97□□□□□ -0.97
UBR1-208ENST00000569066 PLAURQ03405 335 aa8.97□□□□□ -0.97
UBR1-208ENST00000569066 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
UBR1-208ENST00000569066 DTHD1Q6ZMT9 781 aa8.97□□□□□ -0.97
UBR1-208ENST00000569066 ZNF654Q8IZM8 581 aa8.97□□□□□ -0.97
UBR1-208ENST00000569066 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
UBR1-208ENST00000569066 CELA3AP09093 270 aa8.97□□□□□ -0.97
UBR1-208ENST00000569066 UBXN4Q92575 508 aa8.97□□□□□ -0.97
UBR1-208ENST00000569066 PAK2Q13177 524 aa8.96□□□□□ -0.97
UBR1-208ENST00000569066 RASSF4Q9H2L5 321 aa8.96□□□□□ -0.97
UBR1-208ENST00000569066 TRAK1Q9UPV9 953 aa8.96□□□□□ -0.97
UBR1-208ENST00000569066 TLR6Q9Y2C9 796 aa8.96□□□□□ -0.97
UBR1-208ENST00000569066 C2CD2LO14523 706 aa8.96□□□□□ -0.98
UBR1-208ENST00000569066 LCE2BO14633 110 aa8.96□□□□□ -0.98
UBR1-208ENST00000569066 MAP3K6O95382 1288 aa8.96□□□□□ -0.98
UBR1-208ENST00000569066 HYAL2Q12891 473 aa8.96□□□□□ -0.98
UBR1-208ENST00000569066 ASAP3Q8TDY4 903 aa8.96□□□□□ -0.98
UBR1-208ENST00000569066 MINDY4BA8MYZ0 360 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms