RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 TTLL7Q6ZT98 887 aa15.13■□□□□ 0.01
CDH3-208ENST00000569036 PANK3Q9H999 370 aa15.13■□□□□ 0.01
CDH3-208ENST00000569036 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
CDH3-208ENST00000569036 ZNF280AP59817 542 aaPredicted RBP15.12■□□□□ 0.01
CDH3-208ENST00000569036 TCIRG1Q13488 830 aa15.12■□□□□ 0.01
CDH3-208ENST00000569036 SLC10A5Q5PT55 438 aa15.12■□□□□ 0.01
CDH3-208ENST00000569036 KIF6Q6ZMV9 814 aa15.12■□□□□ 0.01
CDH3-208ENST00000569036 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
CDH3-208ENST00000569036 DPF3Q92784 378 aa15.12■□□□□ 0.01
CDH3-208ENST00000569036 ZBTB3Q9H5J0 574 aa15.12■□□□□ 0.01
CDH3-208ENST00000569036 VIL1P09327 827 aaKnown RBP15.11■□□□□ 0.01
CDH3-208ENST00000569036 PTPN12Q05209 780 aaKnown RBP15.11■□□□□ 0.01
CDH3-208ENST00000569036 GRAPQ13588 217 aa15.11■□□□□ 0.01
CDH3-208ENST00000569036 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
CDH3-208ENST00000569036 SLC9C1Q4G0N8 1177 aa15.11■□□□□ 0.01
CDH3-208ENST00000569036 SPRYD7Q5W111 196 aa15.11■□□□□ 0.01
CDH3-208ENST00000569036 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
CDH3-208ENST00000569036 GRAPLQ8TC17 118 aaPredicted RBP15.11■□□□□ 0.01
CDH3-208ENST00000569036 PSME4Q14997 1843 aa15.1■□□□□ 0.01
CDH3-208ENST00000569036 A0A1W2PPC1 479 aa15.1■□□□□ 0.01
CDH3-208ENST00000569036 IGF2BP3O00425 579 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDH3-208ENST00000569036 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
CDH3-208ENST00000569036 MANSC4A6NHS7 340 aaPredicted RBP15.09■□□□□ 0.01
CDH3-208ENST00000569036 WTIPA6NIX2 430 aaPredicted RBP15.09■□□□□ 0.01
CDH3-208ENST00000569036 DIAPH1O60610 1272 aaKnown RBP15.09■□□□□ 0.01
CDH3-208ENST00000569036 MYCP01106 439 aaPredicted RBP15.09■□□□□ 0.01
CDH3-208ENST00000569036 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
CDH3-208ENST00000569036 PTCH2Q9Y6C5 1203 aa15.09■□□□□ 0.01
CDH3-208ENST00000569036 INHBEP58166 350 aa15.08■□□□□ 0
CDH3-208ENST00000569036 CRHR2Q13324 411 aa15.08■□□□□ 0
CDH3-208ENST00000569036 PARP10Q53GL7 1025 aa15.08■□□□□ 0
CDH3-208ENST00000569036 TMC4Q7Z404 712 aa15.08■□□□□ 0
CDH3-208ENST00000569036 POLLQ9UGP5 575 aa15.08■□□□□ 0
CDH3-208ENST00000569036 STXBP5LQ9Y2K9 1186 aa15.08■□□□□ 0
CDH3-208ENST00000569036 C6orf229H3BNL8 230 aa15.07■□□□□ 0
CDH3-208ENST00000569036 NF2P35240 595 aa15.07■□□□□ 0
CDH3-208ENST00000569036 SP3Q02447 781 aa15.07■□□□□ 0
CDH3-208ENST00000569036 GIGYF2Q6Y7W6 1299 aaKnown RBP15.07■□□□□ 0
CDH3-208ENST00000569036 SHISA4Q96DD7 197 aa15.07■□□□□ 0
CDH3-208ENST00000569036 UTP14AQ9BVJ6 771 aaKnown RBP15.07■□□□□ 0
CDH3-208ENST00000569036 MYOZ2Q9NPC6 264 aa15.07■□□□□ 0
CDH3-208ENST00000569036 ZNF646O15015 1829 aaPredicted RBP15.06■□□□□ 0
CDH3-208ENST00000569036 HCLS1P14317 486 aaPredicted RBP15.06■□□□□ 0
CDH3-208ENST00000569036 LDLRAD1Q5T700 205 aa15.06■□□□□ 0
CDH3-208ENST00000569036 ARMC9Q7Z3E5 817 aa15.06■□□□□ 0
CDH3-208ENST00000569036 AGBL3Q8NEM8 1001 aa15.06■□□□□ 0
CDH3-208ENST00000569036 PRDM6Q9NQX0 595 aa15.06■□□□□ 0
CDH3-208ENST00000569036 NSFL1CQ9UNZ2 370 aaKnown RBP15.06■□□□□ 0
CDH3-208ENST00000569036 PRKG1Q13976 671 aa15.05■□□□□ -0
CDH3-208ENST00000569036 RSBN1LQ6PCB5 846 aaPredicted RBP15.05■□□□□ -0
CDH3-208ENST00000569036 DEFB123Q8N688 67 aa15.05■□□□□ -0
CDH3-208ENST00000569036 NECTIN2Q92692 538 aa15.05■□□□□ -0
CDH3-208ENST00000569036 RRP7AQ9Y3A4 280 aaKnown RBP15.05■□□□□ -0
CDH3-208ENST00000569036 COL3A1P02461 1466 aaPredicted RBP15.05■□□□□ -0
CDH3-208ENST00000569036 COL4A1P02462 1669 aa15.05■□□□□ -0
CDH3-208ENST00000569036 ZBTB7BO15156 539 aaPredicted RBP15.04■□□□□ -0
CDH3-208ENST00000569036 MYL6BP14649 208 aa15.04■□□□□ -0
CDH3-208ENST00000569036 GPSM2P81274 684 aa15.04■□□□□ -0
CDH3-208ENST00000569036 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.04■□□□□ -0
CDH3-208ENST00000569036 GMLQ99445 158 aa15.04■□□□□ -0
CDH3-208ENST00000569036 EYA3Q99504 573 aa15.04■□□□□ -0
CDH3-208ENST00000569036 EYSQ5T1H1 3165 aa15.04■□□□□ -0
CDH3-208ENST00000569036 USP17L8P0C7I0 530 aa15.03■□□□□ -0
CDH3-208ENST00000569036 ZBTB48P10074 688 aaPredicted RBP15.03■□□□□ -0
CDH3-208ENST00000569036 NBPF9Q3BBW0 867 aa15.03■□□□□ -0
CDH3-208ENST00000569036 GPR153Q6NV75 609 aa15.03■□□□□ -0
CDH3-208ENST00000569036 ANKRD13DQ6ZTN6 518 aa15.03■□□□□ -0
CDH3-208ENST00000569036 Q7L0L9 218 aa15.03■□□□□ -0
CDH3-208ENST00000569036 MCM10Q7L590 875 aa15.03■□□□□ -0
CDH3-208ENST00000569036 SH3TC2Q8TF17 1288 aa15.03■□□□□ -0
CDH3-208ENST00000569036 HTATIP2Q9BUP3 242 aa15.03■□□□□ -0
CDH3-208ENST00000569036 NR2E3Q9Y5X4 410 aa15.03■□□□□ -0
CDH3-208ENST00000569036 ZSWIM8A7E2V4 1837 aa15.02■□□□□ -0
CDH3-208ENST00000569036 UBE2Q1Q7Z7E8 422 aa15.02■□□□□ -0
CDH3-208ENST00000569036 TBC1D16Q8TBP0 767 aa15.02■□□□□ -0
CDH3-208ENST00000569036 WNK4Q96J92 1243 aa15.02■□□□□ -0
CDH3-208ENST00000569036 PHACTR3Q96KR7 559 aa15.02■□□□□ -0
CDH3-208ENST00000569036 ANGEL1Q9UNK9 670 aaKnown RBP15.02■□□□□ -0
CDH3-208ENST00000569036 ERBB4Q15303 1308 aa15.01□□□□□ -0.01
CDH3-208ENST00000569036 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
CDH3-208ENST00000569036 FZD1Q9UP38 647 aa15.01□□□□□ -0.01
CDH3-208ENST00000569036 OTUD7BQ6GQQ9 843 aa15□□□□□ -0.01
CDH3-208ENST00000569036 CELF1Q92879 486 aaKnown RBP15□□□□□ -0.01
CDH3-208ENST00000569036 SLC10A4Q96EP9 437 aa15□□□□□ -0.01
CDH3-208ENST00000569036 CLMNQ96JQ2 1002 aa15□□□□□ -0.01
CDH3-208ENST00000569036 ZC3H12CQ9C0D7 883 aaKnown RBP15□□□□□ -0.01
CDH3-208ENST00000569036 MTMR10Q9NXD2 777 aa15□□□□□ -0.01
CDH3-208ENST00000569036 ZBTB4Q9P1Z0 1013 aaPredicted RBP15□□□□□ -0.01
CDH3-208ENST00000569036 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
CDH3-208ENST00000569036 ARHGEF6Q15052 776 aa14.99□□□□□ -0.01
CDH3-208ENST00000569036 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
CDH3-208ENST00000569036 PRUNE2Q8WUY3 3088 aa14.98□□□□□ -0.01
CDH3-208ENST00000569036 G3V3G9 751 aa14.98□□□□□ -0.01
CDH3-208ENST00000569036 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
CDH3-208ENST00000569036 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
CDH3-208ENST00000569036 PTPN18Q99952 460 aa14.98□□□□□ -0.01
CDH3-208ENST00000569036 STAP2Q9UGK3 403 aa14.98□□□□□ -0.01
CDH3-208ENST00000569036 MUC3AQ02505 3323 aa14.98□□□□□ -0.01
CDH3-208ENST00000569036 TTC28Q96AY4 2481 aa14.98□□□□□ -0.01
CDH3-208ENST00000569036 WNT10BO00744 389 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms