RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 ZNF165P49910 485 aa21.64■■□□□ 1.05
PKD1-235ENST00000568591 IFFO2Q5TF58 517 aa21.64■■□□□ 1.05
PKD1-235ENST00000568591 DDX19AQ9NUU7 478 aaKnown RBP21.64■■□□□ 1.05
PKD1-235ENST00000568591 MTERF4Q7Z6M4 381 aaKnown RBP21.63■■□□□ 1.05
PKD1-235ENST00000568591 SLIT3O75094 1523 aa21.63■■□□□ 1.05
PKD1-235ENST00000568591 A0A087WZG4 1122 aa21.63■■□□□ 1.05
PKD1-235ENST00000568591 PHKG2P15735 406 aa21.63■■□□□ 1.05
PKD1-235ENST00000568591 CCDC144BQ3MJ40 725 aa21.63■■□□□ 1.05
PKD1-235ENST00000568591 CCDC144CPQ8IYA2 1237 aa21.63■■□□□ 1.05
PKD1-235ENST00000568591 RAPGEF4Q8WZA2 1011 aa21.63■■□□□ 1.05
PKD1-235ENST00000568591 NCOA5Q9HCD5 579 aaKnown RBP21.63■■□□□ 1.05
PKD1-235ENST00000568591 GOLGA6L6A8MZA4 724 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 CTDNEP1O95476 244 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 ZNF75DP51815 510 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 CCT2P78371 535 aaKnown RBP21.62■■□□□ 1.05
PKD1-235ENST00000568591 CHST3Q7LGC8 479 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 KRT28Q7Z3Y7 464 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 ERCC4Q92889 916 aaPredicted RBP21.62■■□□□ 1.05
PKD1-235ENST00000568591 CCDC94Q9BW85 323 aaPredicted RBP21.62■■□□□ 1.05
PKD1-235ENST00000568591 APOBRQ0VD83 1088 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 MCMDC2Q4G0Z9 681 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 PLA2G4DQ86XP0 818 aa21.62■■□□□ 1.05
PKD1-235ENST00000568591 C16orf45Q96MC5 204 aaPredicted RBP21.62■■□□□ 1.05
PKD1-235ENST00000568591 ADD1P35611 737 aaKnown RBP21.61■■□□□ 1.05
PKD1-235ENST00000568591 FGD1P98174 961 aa21.61■■□□□ 1.05
PKD1-235ENST00000568591 C11orf57Q6ZUT1 292 aaPredicted RBP21.61■■□□□ 1.05
PKD1-235ENST00000568591 BCL11BQ9C0K0 894 aaPredicted RBP21.61■■□□□ 1.05
PKD1-235ENST00000568591 GUCY1B3Q02153 619 aa21.61■■□□□ 1.05
PKD1-235ENST00000568591 KRT32Q14532 448 aa21.61■■□□□ 1.05
PKD1-235ENST00000568591 ARID5BQ14865 1188 aa21.61■■□□□ 1.05
PKD1-235ENST00000568591 LMBR1LQ6UX01 489 aa21.61■■□□□ 1.05
PKD1-235ENST00000568591 HAUS7Q99871 368 aa21.61■■□□□ 1.05
PKD1-235ENST00000568591 GOLPH3LQ9H4A5 285 aa21.61■■□□□ 1.05
PKD1-235ENST00000568591 GOLIM4O00461 696 aa21.6■■□□□ 1.05
PKD1-235ENST00000568591 TIMM10P62072 90 aa21.6■■□□□ 1.05
PKD1-235ENST00000568591 ATP2B3Q16720 1220 aa21.6■■□□□ 1.05
PKD1-235ENST00000568591 RABL6Q3YEC7 729 aaPredicted RBP21.6■■□□□ 1.05
PKD1-235ENST00000568591 ZSCAN25Q6NSZ9 544 aa21.6■■□□□ 1.05
PKD1-235ENST00000568591 NSUN7Q8NE18 718 aaKnown RBP21.6■■□□□ 1.05
PKD1-235ENST00000568591 TDRD7Q8NHU6 1098 aaKnown RBP21.6■■□□□ 1.05
PKD1-235ENST00000568591 NEUROD6Q96NK8 337 aa21.6■■□□□ 1.05
PKD1-235ENST00000568591 NAP1L2Q9ULW6 460 aaPredicted RBP21.6■■□□□ 1.05
PKD1-235ENST00000568591 U3KPZ7 1027 aaPredicted RBP21.6■■□□□ 1.05
PKD1-235ENST00000568591 MEGF6O75095 1541 aa21.59■■□□□ 1.05
PKD1-235ENST00000568591 CACTINQ8WUQ7 758 aaKnown RBP21.59■■□□□ 1.05
PKD1-235ENST00000568591 TPM3P06753 285 aa21.59■■□□□ 1.05
PKD1-235ENST00000568591 CABLES1Q8TDN4 633 aa21.59■■□□□ 1.05
PKD1-235ENST00000568591 CBX1P83916 185 aa21.58■■□□□ 1.05
PKD1-235ENST00000568591 PPP4R3BQ5MIZ7 849 aa21.58■■□□□ 1.05
PKD1-235ENST00000568591 KLHL34Q8N239 644 aa21.58■■□□□ 1.05
PKD1-235ENST00000568591 FBXW7Q969H0 707 aa21.58■■□□□ 1.05
PKD1-235ENST00000568591 PTPDC1A2A3K4 754 aa21.58■■□□□ 1.04
PKD1-235ENST00000568591 CYP27B1O15528 508 aa21.58■■□□□ 1.04
PKD1-235ENST00000568591 PDIA4P13667 645 aaKnown RBP21.58■■□□□ 1.04
PKD1-235ENST00000568591 CASP7P55210 303 aa21.58■■□□□ 1.04
PKD1-235ENST00000568591 SMARCC2Q8TAQ2 1214 aa21.58■■□□□ 1.04
PKD1-235ENST00000568591 USP28Q96RU2 1077 aa21.58■■□□□ 1.04
PKD1-235ENST00000568591 CLIP2Q9UDT6 1046 aa21.58■■□□□ 1.04
PKD1-235ENST00000568591 ADAMTS7Q9UKP4 1686 aa21.57■■□□□ 1.04
PKD1-235ENST00000568591 SNRPA1P09661 255 aaKnown RBP21.57■■□□□ 1.04
PKD1-235ENST00000568591 KBTBD3Q8NAB2 608 aa21.57■■□□□ 1.04
PKD1-235ENST00000568591 CHRNA2Q15822 529 aa21.57■■□□□ 1.04
PKD1-235ENST00000568591 TTC5Q8N0Z6 440 aa21.57■■□□□ 1.04
PKD1-235ENST00000568591 GPHNQ9NQX3 736 aaPredicted RBP21.57■■□□□ 1.04
PKD1-235ENST00000568591 PRDM4Q9UKN5 801 aa21.57■■□□□ 1.04
PKD1-235ENST00000568591 CAMTA1Q9Y6Y1 1673 aa21.56■■□□□ 1.04
PKD1-235ENST00000568591 CCAR1Q8IX12 1150 aaKnown RBP21.56■■□□□ 1.04
PKD1-235ENST00000568591 ZNF594Q96JF6 807 aaPredicted RBP21.56■■□□□ 1.04
PKD1-235ENST00000568591 PFKFB2O60825 505 aa21.56■■□□□ 1.04
PKD1-235ENST00000568591 NAA30Q147X3 362 aaPredicted RBP21.56■■□□□ 1.04
PKD1-235ENST00000568591 IQCB1Q15051 598 aa21.56■■□□□ 1.04
PKD1-235ENST00000568591 TTLL5Q6EMB2 1281 aa21.56■■□□□ 1.04
PKD1-235ENST00000568591 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
PKD1-235ENST00000568591 CHAF1AQ13111 956 aaPredicted RBP21.55■■□□□ 1.04
PKD1-235ENST00000568591 ATG9AQ7Z3C6 839 aa21.55■■□□□ 1.04
PKD1-235ENST00000568591 SPDYE4A6NLX3 237 aa21.55■■□□□ 1.04
PKD1-235ENST00000568591 SNW1Q13573 536 aaKnown RBP21.55■■□□□ 1.04
PKD1-235ENST00000568591 DHX32Q7L7V1 743 aaKnown RBP21.55■■□□□ 1.04
PKD1-235ENST00000568591 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
PKD1-235ENST00000568591 CSB-PGBD3P0DP91 1061 aa21.54■■□□□ 1.04
PKD1-235ENST00000568591 FOXO4P98177 505 aa21.54■■□□□ 1.04
PKD1-235ENST00000568591 LRRC24Q50LG9 513 aa21.54■■□□□ 1.04
PKD1-235ENST00000568591 PAG1Q9NWQ8 432 aa21.54■■□□□ 1.04
PKD1-235ENST00000568591 OTUD7BQ6GQQ9 843 aa21.54■■□□□ 1.04
PKD1-235ENST00000568591 ZSCAN16Q9H4T2 348 aaPredicted RBP21.54■■□□□ 1.04
PKD1-235ENST00000568591 CFAP45Q9UL16 551 aa21.54■■□□□ 1.04
PKD1-235ENST00000568591 USP27XA6NNY8 438 aa21.53■■□□□ 1.04
PKD1-235ENST00000568591 TTLL7Q6ZT98 887 aa21.53■■□□□ 1.04
PKD1-235ENST00000568591 IFNL2Q8IZJ0 200 aa21.53■■□□□ 1.04
PKD1-235ENST00000568591 NBPF26B4DH59 902 aa21.53■■□□□ 1.04
PKD1-235ENST00000568591 NBPF14Q5TI25 921 aa21.53■■□□□ 1.04
PKD1-235ENST00000568591 NBPF10Q6P3W6 841 aaKnown RBP21.53■■□□□ 1.04
PKD1-235ENST00000568591 NBPF15Q8N660 670 aa21.53■■□□□ 1.04
PKD1-235ENST00000568591 E7EWF7 191 aa21.52■■□□□ 1.04
PKD1-235ENST00000568591 HSPD1P10809 573 aaKnown RBP21.52■■□□□ 1.04
PKD1-235ENST00000568591 EXOSC10Q01780 885 aaKnown RBP21.52■■□□□ 1.04
PKD1-235ENST00000568591 SH3TC1Q8TE82 1336 aa21.52■■□□□ 1.04
PKD1-235ENST00000568591 SCN11AQ9UI33 1791 aa21.52■■□□□ 1.04
PKD1-235ENST00000568591 U2AF2P26368 475 aaKnown RBP eCLIP21.52■■□□□ 1.03
PKD1-235ENST00000568591 RAB11FIP4Q86YS3 637 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms