RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 DPP8Q6V1X1 898 aaPredicted RBP18.48■□□□□ 0.55
KLHDC4-223ENST00000568499 ARHGAP27Q6ZUM4 889 aa18.48■□□□□ 0.55
KLHDC4-223ENST00000568499 SUPT20HQ8NEM7 779 aa18.48■□□□□ 0.55
KLHDC4-223ENST00000568499 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
KLHDC4-223ENST00000568499 SURF6O75683 361 aaKnown RBP18.47■□□□□ 0.55
KLHDC4-223ENST00000568499 IL15P40933 162 aaPredicted RBP18.47■□□□□ 0.55
KLHDC4-223ENST00000568499 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
KLHDC4-223ENST00000568499 SIL1Q9H173 461 aa18.47■□□□□ 0.55
KLHDC4-223ENST00000568499 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
KLHDC4-223ENST00000568499 XDHP47989 1333 aa18.47■□□□□ 0.55
KLHDC4-223ENST00000568499 KCNJ4P48050 445 aa18.46■□□□□ 0.55
KLHDC4-223ENST00000568499 METTL24Q5JXM2 366 aa18.46■□□□□ 0.55
KLHDC4-223ENST00000568499 PA2G4Q9UQ80 394 aaKnown RBP18.46■□□□□ 0.55
KLHDC4-223ENST00000568499 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.54
KLHDC4-223ENST00000568499 ATP2B4P23634 1241 aa18.45■□□□□ 0.54
KLHDC4-223ENST00000568499 CHRNDQ07001 517 aa18.45■□□□□ 0.54
KLHDC4-223ENST00000568499 RWDD1Q9H446 243 aaPredicted RBP18.45■□□□□ 0.54
KLHDC4-223ENST00000568499 CEP126Q9P2H0 1117 aa18.45■□□□□ 0.54
KLHDC4-223ENST00000568499 GGA1Q9UJY5 639 aa18.45■□□□□ 0.54
KLHDC4-223ENST00000568499 RIPOR2Q9Y4F9 1068 aa18.45■□□□□ 0.54
KLHDC4-223ENST00000568499 C6orf229H3BNL8 230 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 GPSM2P81274 684 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 LRRC24Q50LG9 513 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 ERC1Q8IUD2 1116 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 PSMD1Q99460 953 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 EYA3Q99504 573 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 TAOK3Q9H2K8 898 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 PODXL2Q9NZ53 605 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 LEMD3Q9Y2U8 911 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 NOP58Q9Y2X3 529 aaKnown RBP18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 PCDHB15Q9Y5E8 787 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
KLHDC4-223ENST00000568499 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
KLHDC4-223ENST00000568499 FKBP4Q02790 459 aaKnown RBP eCLIP18.43■□□□□ 0.545e-6■■■□□ 17
KLHDC4-223ENST00000568499 SIRT2Q8IXJ6 389 aa18.43■□□□□ 0.54
KLHDC4-223ENST00000568499 RAB11FIP3O75154 756 aa18.42■□□□□ 0.54
KLHDC4-223ENST00000568499 UFL1O94874 794 aa18.42■□□□□ 0.54
KLHDC4-223ENST00000568499 OLFM4Q6UX06 510 aa18.42■□□□□ 0.54
KLHDC4-223ENST00000568499 VPS33BQ9H267 617 aa18.42■□□□□ 0.54
KLHDC4-223ENST00000568499 AKAP2Q9Y2D5 859 aa18.42■□□□□ 0.54
KLHDC4-223ENST00000568499 PDE8BO95263 885 aa18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 HDAC1Q13547 482 aaPredicted RBP18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 HELBQ8NG08 1087 aaPredicted RBP18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 RTFDC1Q9BY42 306 aaPredicted RBP18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 ZBTB47Q9UFB7 747 aaPredicted RBP18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
KLHDC4-223ENST00000568499 CACNA1SQ13698 1873 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 G3V3G9 751 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 TAF5LO75529 589 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 PUM3Q15397 648 aaKnown RBP18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 WASHC4Q2M389 1173 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 DCAF8Q5TAQ9 597 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 TBC1D16Q8TBP0 767 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 ZC3H12CQ9C0D7 883 aaKnown RBP18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 EXOC6BQ9Y2D4 811 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 ZNF804BA4D1E1 1349 aa18.4■□□□□ 0.54
KLHDC4-223ENST00000568499 ARFGEF1Q9Y6D6 1849 aa18.39■□□□□ 0.54
KLHDC4-223ENST00000568499 TAF1P21675 1872 aa18.39■□□□□ 0.54
KLHDC4-223ENST00000568499 NFKBIEO00221 500 aa18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 IFIT1P09914 478 aaKnown RBP18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 LMNB1P20700 586 aa18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 LPIN2Q92539 896 aa18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 KIF1BPQ96EK5 621 aa18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
KLHDC4-223ENST00000568499 PPIP5K2O43314 1243 aa18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 SLC5A1P13866 664 aa18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 IARSP41252 1262 aaKnown RBP18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 TFCP2Q12800 502 aa18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 ZNF277Q9NRM2 450 aaPredicted RBP18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 COL4A1P02462 1669 aa18.37■□□□□ 0.53
KLHDC4-223ENST00000568499 LRRC37AA6NMS7 1700 aa18.36■□□□□ 0.53
KLHDC4-223ENST00000568499 RASSF7Q02833 373 aa18.36■□□□□ 0.53
KLHDC4-223ENST00000568499 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
KLHDC4-223ENST00000568499 CAVIN4Q5BKX8 364 aa18.36■□□□□ 0.53
KLHDC4-223ENST00000568499 VGLL2Q8N8G2 317 aa18.36■□□□□ 0.53
KLHDC4-223ENST00000568499 GPR108Q9NPR9 543 aa18.36■□□□□ 0.53
KLHDC4-223ENST00000568499 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 APBB1O00213 710 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 RIMBP2O15034 1052 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 SASH1O94885 1247 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 KIAA2012Q0VF49 1180 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 SLC51AQ86UW1 340 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 VPS37DQ86XT2 251 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 CLASRPQ8N2M8 674 aaKnown RBP18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
KLHDC4-223ENST00000568499 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
KLHDC4-223ENST00000568499 MED23Q9ULK4 1368 aa18.34■□□□□ 0.53
KLHDC4-223ENST00000568499 AOC3Q16853 763 aa18.34■□□□□ 0.53
KLHDC4-223ENST00000568499 GORABQ5T7V8 394 aa18.34■□□□□ 0.53
KLHDC4-223ENST00000568499 C15orf52Q6ZUT6 534 aaKnown RBP18.34■□□□□ 0.53
KLHDC4-223ENST00000568499 ZNF804AQ7Z570 1209 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms