RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 KRT24Q2M2I5 525 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 ANKRD13DQ6ZTN6 518 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 PLBD2Q8NHP8 589 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 FAM89AQ96GI7 184 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 CFAP44Q96MT7 982 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 MRS2Q9HD23 443 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
PTPN9-205ENST00000568108 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 PSMD14O00487 310 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 HNRNPUQ00839 825 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPN9-205ENST00000568108 DGKZQ13574 1117 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 SF3B3Q15393 1217 aaKnown RBP8.24□□□□□ -1.09
PTPN9-205ENST00000568108 DOK7Q18PE1 504 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 TBC1D10BQ4KMP7 808 aaPredicted RBP8.24□□□□□ -1.09
PTPN9-205ENST00000568108 RBM26Q5T8P6 1007 aaKnown RBP8.24□□□□□ -1.09
PTPN9-205ENST00000568108 DLK2Q6UY11 383 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 KRT26Q7Z3Y9 468 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 CELF1Q92879 486 aaKnown RBP8.24□□□□□ -1.09
PTPN9-205ENST00000568108 ZIC5Q96T25 663 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 ISCA1Q9BUE6 129 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 MCOLN1Q9GZU1 580 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 KCNQ5Q9NR82 932 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 POLLQ9UGP5 575 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 THSD7BQ9C0I4 1608 aa8.24□□□□□ -1.09
PTPN9-205ENST00000568108 CASP8AP2Q9UKL3 1982 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 RPS12P25398 132 aaKnown RBP8.23□□□□□ -1.09
PTPN9-205ENST00000568108 RPS8P62241 208 aaKnown RBP8.23□□□□□ -1.09
PTPN9-205ENST00000568108 GPSM2P81274 684 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 RALBP1Q15311 655 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
PTPN9-205ENST00000568108 HDGFL1Q5TGJ6 251 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 RGMBQ6NW40 437 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 CCDC146Q8IYE0 955 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 C2orf69Q8N8R5 385 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 DCPSQ96C86 337 aaKnown RBP8.23□□□□□ -1.09
PTPN9-205ENST00000568108 EYA3Q99504 573 aa8.23□□□□□ -1.09
PTPN9-205ENST00000568108 DBF4Q9UBU7 674 aaPredicted RBP8.23□□□□□ -1.09
PTPN9-205ENST00000568108 SUPT16HQ9Y5B9 1047 aaKnown RBP8.23□□□□□ -1.09
PTPN9-205ENST00000568108 TAF1P21675 1872 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 FAM155AB1AL88 458 aaPredicted RBP8.22□□□□□ -1.09
PTPN9-205ENST00000568108 ADM5C9JUS6 153 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 G3V3G9 751 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 IRS4O14654 1257 aaPredicted RBP8.22□□□□□ -1.09
PTPN9-205ENST00000568108 ECE2O60344 883 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 SLC34A2O95436 690 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 EGFRP00533 1210 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 ZNF157P51786 506 aaPredicted RBP8.22□□□□□ -1.09
PTPN9-205ENST00000568108 KIF23Q02241 960 aaPredicted RBP8.22□□□□□ -1.09
PTPN9-205ENST00000568108 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
PTPN9-205ENST00000568108 DCAF8Q5TAQ9 597 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 TBC1D16Q8TBP0 767 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 CCDC102AQ96A19 550 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 ZC3H12CQ9C0D7 883 aaKnown RBP8.22□□□□□ -1.09
PTPN9-205ENST00000568108 GBA2Q9HCG7 927 aaPredicted RBP8.22□□□□□ -1.09
PTPN9-205ENST00000568108 HYPKQ9NX55 129 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 TRIM35Q9UPQ4 493 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 ANKRD36CQ5JPF3 1778 aa8.22□□□□□ -1.09
PTPN9-205ENST00000568108 LAMB2P55268 1798 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 VIL1P09327 827 aaKnown RBP8.21□□□□□ -1.1
PTPN9-205ENST00000568108 HOXB7P09629 217 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 DUSP27Q5VZP5 1158 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 RIC3Q7Z5B4 369 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 SULF1Q8IWU6 871 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 RUNDC1Q96C34 613 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 ZBTB47Q9UFB7 747 aaPredicted RBP8.21□□□□□ -1.1
PTPN9-205ENST00000568108 DUOX1Q9NRD9 1551 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 RTL9Q8NET4 1388 aa8.21□□□□□ -1.1
PTPN9-205ENST00000568108 TRPA1O75762 1119 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 HSP90B1P14625 803 aaKnown RBP8.2□□□□□ -1.1
PTPN9-205ENST00000568108 WDR43Q15061 677 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPN9-205ENST00000568108 KIF4BQ2VIQ3 1234 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 ZBTB38Q8NAP3 1195 aaPredicted RBP8.2□□□□□ -1.1
PTPN9-205ENST00000568108 SEC31BQ9NQW1 1179 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 RNF186Q9NXI6 227 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 PODXL2Q9NZ53 605 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 ANKIB1Q9P2G1 1089 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 TAOK2Q9UL54 1235 aa8.2□□□□□ -1.1
PTPN9-205ENST00000568108 POLR2AP24928 1970 aaKnown RBP8.2□□□□□ -1.1
PTPN9-205ENST00000568108 MYBBP1AQ9BQG0 1328 aaKnown RBP8.2□□□□□ -1.1
PTPN9-205ENST00000568108 UFL1O94874 794 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 SCARF1Q14162 830 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 ERICH6BQ5W0A0 696 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 CDCA5Q96FF9 252 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 CSRNP1Q96S65 589 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 PHAXQ9H814 394 aaKnown RBP8.19□□□□□ -1.1
PTPN9-205ENST00000568108 SAGE1Q9NXZ1 904 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 GGA3Q9NZ52 723 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 ADAMTS8Q9UP79 889 aa8.19□□□□□ -1.1
PTPN9-205ENST00000568108 ASTN2O75129 1339 aaPredicted RBP8.19□□□□□ -1.1
PTPN9-205ENST00000568108 ELL2O00472 640 aaPredicted RBP8.18□□□□□ -1.1
PTPN9-205ENST00000568108 SLC10A3P09131 477 aa8.18□□□□□ -1.1
PTPN9-205ENST00000568108 ZNF280AP59817 542 aaPredicted RBP8.18□□□□□ -1.1
PTPN9-205ENST00000568108 CCDC152Q4G0S7 254 aa8.18□□□□□ -1.1
PTPN9-205ENST00000568108 ANGEL2Q5VTE6 544 aaKnown RBP8.18□□□□□ -1.1
PTPN9-205ENST00000568108 RSBN1LQ6PCB5 846 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms