RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 KRT24Q2M2I5 525 aa11.97□□□□□ -0.49
CDH13-210ENST00000567445 PNMA8AQ86V59 439 aaPredicted RBP11.97□□□□□ -0.49
CDH13-210ENST00000567445 TMX4Q9H1E5 349 aaPredicted RBP11.97□□□□□ -0.49
CDH13-210ENST00000567445 ANKRD36CQ5JPF3 1778 aa11.97□□□□□ -0.49
CDH13-210ENST00000567445 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
CDH13-210ENST00000567445 HOXB7P09629 217 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 HOXB1P14653 301 aaPredicted RBP11.96□□□□□ -0.49
CDH13-210ENST00000567445 TCIRG1Q13488 830 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 LARGE2Q8N3Y3 721 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 ATP6V0A2Q9Y487 856 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 COL4A5P29400 1685 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 ABCC4O15439 1325 aa11.96□□□□□ -0.49
CDH13-210ENST00000567445 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
CDH13-210ENST00000567445 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
CDH13-210ENST00000567445 PRKRIP1Q9H875 184 aaPredicted RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 TRMT112Q9UI30 125 aaKnown RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 ADAMTSL1Q8N6G6 1762 aa11.95□□□□□ -0.5
CDH13-210ENST00000567445 BBOX1O75936 387 aa11.95□□□□□ -0.5
CDH13-210ENST00000567445 HSPA1AP0DMV8 641 aaKnown RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 HSPA1BP0DMV9 641 aaKnown RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 NIM1KQ8IY84 436 aa11.95□□□□□ -0.5
CDH13-210ENST00000567445 VPS33BQ9H267 617 aa11.95□□□□□ -0.5
CDH13-210ENST00000567445 DBF4Q9UBU7 674 aaPredicted RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
CDH13-210ENST00000567445 GJA3Q9Y6H8 435 aa11.95□□□□□ -0.5
CDH13-210ENST00000567445 SH3TC1Q8TE82 1336 aa11.94□□□□□ -0.5
CDH13-210ENST00000567445 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
CDH13-210ENST00000567445 TMEM88BA6NKF7 163 aa11.94□□□□□ -0.5
CDH13-210ENST00000567445 PPIP5K2O43314 1243 aa11.94□□□□□ -0.5
CDH13-210ENST00000567445 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
CDH13-210ENST00000567445 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
CDH13-210ENST00000567445 SUPT20HQ8NEM7 779 aa11.94□□□□□ -0.5
CDH13-210ENST00000567445 PLBD2Q8NHP8 589 aa11.94□□□□□ -0.5
CDH13-210ENST00000567445 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
CDH13-210ENST00000567445 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 LAMB2P55268 1798 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 SCNN1DP51172 638 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 AOC3Q16853 763 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 DUSP27Q5VZP5 1158 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 MAP1SQ66K74 1059 aaPredicted RBP11.93□□□□□ -0.5
CDH13-210ENST00000567445 DPP8Q6V1X1 898 aaPredicted RBP11.93□□□□□ -0.5
CDH13-210ENST00000567445 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
CDH13-210ENST00000567445 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 CNTROBQ8N137 903 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 HYPKQ9NX55 129 aa11.93□□□□□ -0.5
CDH13-210ENST00000567445 PPP1R37O75864 691 aa11.92□□□□□ -0.5
CDH13-210ENST00000567445 EPS15P42566 896 aa11.92□□□□□ -0.5
CDH13-210ENST00000567445 GRAPQ13588 217 aa11.92□□□□□ -0.5
CDH13-210ENST00000567445 MPNDQ8N594 471 aa11.92□□□□□ -0.5
CDH13-210ENST00000567445 GRAPLQ8TC17 118 aaPredicted RBP11.92□□□□□ -0.5
CDH13-210ENST00000567445 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
CDH13-210ENST00000567445 LTBP1Q14766 1721 aa11.92□□□□□ -0.5
CDH13-210ENST00000567445 ZNF853P0CG23 659 aa11.91□□□□□ -0.5
CDH13-210ENST00000567445 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
CDH13-210ENST00000567445 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
CDH13-210ENST00000567445 APAF1O14727 1248 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 GNAI1P63096 354 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 CALD1Q05682 793 aaKnown RBP11.9□□□□□ -0.5
CDH13-210ENST00000567445 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 USP50Q70EL3 339 aaPredicted RBP11.9□□□□□ -0.5
CDH13-210ENST00000567445 TMC4Q7Z404 712 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 TNS4Q8IZW8 715 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 ZNF428Q96B54 188 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 FAM89AQ96GI7 184 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 IFT57Q9NWB7 429 aa11.9□□□□□ -0.5
CDH13-210ENST00000567445 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
CDH13-210ENST00000567445 VEGFBP49765 207 aa11.89□□□□□ -0.51
CDH13-210ENST00000567445 CXCL9Q07325 125 aa11.89□□□□□ -0.51
CDH13-210ENST00000567445 SF3B3Q15393 1217 aaKnown RBP11.89□□□□□ -0.51
CDH13-210ENST00000567445 GPRC5DQ9NZD1 345 aa11.89□□□□□ -0.51
CDH13-210ENST00000567445 TAF1P21675 1872 aa11.89□□□□□ -0.51
CDH13-210ENST00000567445 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
CDH13-210ENST00000567445 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
CDH13-210ENST00000567445 TRIM28Q13263 835 aaKnown RBP11.89□□□□□ -0.51
CDH13-210ENST00000567445 ADARB2Q9NS39 739 aaKnown RBP11.89□□□□□ -0.51
CDH13-210ENST00000567445 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
CDH13-210ENST00000567445 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
CDH13-210ENST00000567445 TNIP1Q15025 636 aa11.88□□□□□ -0.51
CDH13-210ENST00000567445 DEFB115Q30KQ5 88 aa11.88□□□□□ -0.51
CDH13-210ENST00000567445 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
CDH13-210ENST00000567445 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
CDH13-210ENST00000567445 LRRC37AA6NMS7 1700 aa11.87□□□□□ -0.51
CDH13-210ENST00000567445 CDHR2Q9BYE9 1310 aa11.87□□□□□ -0.51
CDH13-210ENST00000567445 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
CDH13-210ENST00000567445 IRS4O14654 1257 aaPredicted RBP11.87□□□□□ -0.51
CDH13-210ENST00000567445 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
CDH13-210ENST00000567445 RTL5Q5HYW3 569 aaPredicted RBP11.87□□□□□ -0.51
CDH13-210ENST00000567445 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
CDH13-210ENST00000567445 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
CDH13-210ENST00000567445 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
CDH13-210ENST00000567445 DUOX1Q9NRD9 1551 aa11.87□□□□□ -0.51
CDH13-210ENST00000567445 FOXN1O15353 648 aa11.86□□□□□ -0.51
CDH13-210ENST00000567445 RAD17O75943 681 aa11.86□□□□□ -0.51
CDH13-210ENST00000567445 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms