RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 SMARCE1Q969G3 411 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC47Q96A33 483 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 GJA3Q9Y6H8 435 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 KIF1AQ12756 1690 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 SMC2O95347 1197 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 IGHMBP2P38935 993 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 PIBF1Q8WXW3 757 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 SPATS2LQ9NUQ6 558 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 KIF3CO14782 793 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 XRCC6P12956 609 aaKnown RBP eCLIP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 GIGYF2Q6Y7W6 1299 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 GJD4Q96KN9 370 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 MKRN1Q9UHC7 482 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 A0A087WZG4 1122 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 EZH2Q15910 746 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 SYNE3Q6ZMZ3 975 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 ILDR1Q86SU0 546 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 GPR101Q96P66 508 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 SRGAP3O43295 1099 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 ERLIN2O94905 339 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 RPAINQ86UA6 219 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC102AQ96A19 550 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 UTP14AQ9BVJ6 771 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 CWC25Q9NXE8 425 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 RGPD5Q99666 1765 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 RARSP54136 660 aaKnown RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 EXOC6BQ9Y2D4 811 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 STRCP1A6NGW2 1772 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 KLHL40Q2TBA0 621 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 NBPF14Q5TI25 921 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 DNAJC10Q8IXB1 793 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 CHD2O14647 1828 aaKnown RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 NRXN1Q9ULB1 1477 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 ARHGEF25Q86VW2 580 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 DCAF5Q96JK2 942 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 PLEKHF1Q96S99 279 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 ZBTB7AO95365 584 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 GNAI3P08754 354 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 BICC1Q9H694 974 aaKnown RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 HYPKQ9NX55 129 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 TRIM29Q14134 588 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 SH2D4BQ5SQS7 431 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 PDZRN3Q9UPQ7 1066 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 HSPA4P34932 840 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 CRKLP46109 303 aaKnown RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 FLIIQ13045 1269 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 ANKRD1Q15327 319 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 ZNF790Q6PG37 636 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 C16orf71Q8IYS4 520 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 ADGRB1O14514 1584 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 BLMP54132 1417 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 USP19O94966 1318 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 C6orf229H3BNL8 230 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 PROSER3Q2NL68 480 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 ODF2Q5BJF6 829 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 SMARCC1Q92922 1105 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 ZFP91Q96JP5 570 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 CRACR2AQ9BSW2 395 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 TMEM132AQ24JP5 1023 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 KLHDC4Q8TBB5 520 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 NUP133Q8WUM0 1156 aa6.92□□□□□ -1.3
CNOT1-211ENST00000567188 NOL7Q9UMY1 257 aaKnown RBP6.92□□□□□ -1.3
CNOT1-211ENST00000567188 GSDMDP57764 484 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 RAI14Q9P0K7 980 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 POLD1P28340 1107 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 CCT4P50991 539 aaKnown RBP6.91□□□□□ -1.3
CNOT1-211ENST00000567188 MVPQ14764 893 aaKnown RBP6.91□□□□□ -1.3
CNOT1-211ENST00000567188 CEP112Q8N8E3 955 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 IL17REQ8NFR9 667 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 FSD1Q9BTV5 496 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 SMTNL1A8MU46 457 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 K7ELQ4 463 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-211ENST00000567188 TTLL7Q6ZT98 887 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 SPATS2Q86XZ4 545 aaKnown RBP6.91□□□□□ -1.3
CNOT1-211ENST00000567188 RNF214Q8ND24 703 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 MYRIPQ8NFW9 859 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 AKAP12Q02952 1782 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 CNPY4Q8N129 248 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 USPL1Q5W0Q7 1092 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 UBE3BQ7Z3V4 1068 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 NBPF11Q86T75 865 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 RSPH14Q9UHP6 348 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 WDR33Q9C0J8 1336 aaKnown RBP6.91□□□□□ -1.3
CNOT1-211ENST00000567188 JCADQ9P266 1359 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 TTLL12Q14166 644 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC158Q5M9N0 1113 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 ATF7IPQ6VMQ6 1270 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC87Q9NVE4 849 aa6.91□□□□□ -1.3
CNOT1-211ENST00000567188 DHX16O60231 1041 aaKnown RBP6.9□□□□□ -1.3
CNOT1-211ENST00000567188 LMAN1P49257 510 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 PIGBQ92521 554 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 NUCKS1Q9H1E3 243 aaKnown RBP6.9□□□□□ -1.3
CNOT1-211ENST00000567188 CENPHQ9H3R5 247 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 TAF5LO75529 589 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 KIF5BP33176 963 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 R3HDM1Q15032 1099 aaKnown RBP6.9□□□□□ -1.3
CNOT1-211ENST00000567188 DBN1Q16643 649 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.3
CNOT1-211ENST00000567188 CLEC11AQ9Y240 323 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 WDR17Q8IZU2 1322 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms