RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN3-216ENST00000567071 PRO3102Q9H379 93 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-216ENST00000567071 ASTN2O75129 1339 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-216ENST00000567071 SOX1O00570 391 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-216ENST00000567071 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-216ENST00000567071 SP3Q02447 781 aa13.02□□□□□ -0.33
CAPN3-216ENST00000567071 TMC4Q7Z404 712 aa13.02□□□□□ -0.33
CAPN3-216ENST00000567071 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
CAPN3-216ENST00000567071 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
CAPN3-216ENST00000567071 MYCP01106 439 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-216ENST00000567071 SPRYD7Q5W111 196 aa13.01□□□□□ -0.33
CAPN3-216ENST00000567071 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
CAPN3-216ENST00000567071 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
CAPN3-216ENST00000567071 NECTIN2Q92692 538 aa13.01□□□□□ -0.33
CAPN3-216ENST00000567071 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
CAPN3-216ENST00000567071 LAMA3Q16787 3333 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 MAP3K15Q6ZN16 1313 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 NBPF26B4DH59 902 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 G3V3G9 751 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 ECE2O60344 883 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 SUSD4Q5VX71 490 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 NBPF10Q6P3W6 841 aaKnown RBP13□□□□□ -0.33
CAPN3-216ENST00000567071 EYA3Q99504 573 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
CAPN3-216ENST00000567071 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
CAPN3-216ENST00000567071 KCNQ3O43525 872 aa12.99□□□□□ -0.33
CAPN3-216ENST00000567071 NTSR2O95665 410 aa12.99□□□□□ -0.33
CAPN3-216ENST00000567071 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
CAPN3-216ENST00000567071 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
CAPN3-216ENST00000567071 PTCH2Q9Y6C5 1203 aa12.99□□□□□ -0.33
CAPN3-216ENST00000567071 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
CAPN3-216ENST00000567071 WTIPA6NIX2 430 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-216ENST00000567071 C6orf229H3BNL8 230 aa12.98□□□□□ -0.33
CAPN3-216ENST00000567071 VIL1P09327 827 aaKnown RBP12.98□□□□□ -0.33
CAPN3-216ENST00000567071 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
CAPN3-216ENST00000567071 GRAPQ13588 217 aa12.98□□□□□ -0.33
CAPN3-216ENST00000567071 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
CAPN3-216ENST00000567071 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
CAPN3-216ENST00000567071 GRAPLQ8TC17 118 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-216ENST00000567071 ZBTB7BO15156 539 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-216ENST00000567071 ZBTB48P10074 688 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-216ENST00000567071 COL9A1P20849 921 aa12.97□□□□□ -0.33
CAPN3-216ENST00000567071 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-216ENST00000567071 CRHR2Q13324 411 aa12.97□□□□□ -0.33
CAPN3-216ENST00000567071 AGBL3Q8NEM8 1001 aa12.97□□□□□ -0.33
CAPN3-216ENST00000567071 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
CAPN3-216ENST00000567071 RTL9Q8NET4 1388 aa12.96□□□□□ -0.33
CAPN3-216ENST00000567071 TAF1P21675 1872 aa12.96□□□□□ -0.33
CAPN3-216ENST00000567071 DUOX1Q9NRD9 1551 aa12.96□□□□□ -0.33
CAPN3-216ENST00000567071 PRKG1Q13976 671 aa12.96□□□□□ -0.33
CAPN3-216ENST00000567071 DOK7Q18PE1 504 aa12.96□□□□□ -0.33
CAPN3-216ENST00000567071 PRAMEF18Q5VWM3 479 aa12.96□□□□□ -0.33
CAPN3-216ENST00000567071 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
CAPN3-216ENST00000567071 MYOZ2Q9NPC6 264 aa12.96□□□□□ -0.33
CAPN3-216ENST00000567071 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.33
CAPN3-216ENST00000567071 ANKRD36CQ5JPF3 1778 aa12.96□□□□□ -0.34
CAPN3-216ENST00000567071 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
CAPN3-216ENST00000567071 IGF2BP3O00425 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
CAPN3-216ENST00000567071 SLC10A5Q5PT55 438 aa12.95□□□□□ -0.34
CAPN3-216ENST00000567071 Q7L0L9 218 aa12.95□□□□□ -0.34
CAPN3-216ENST00000567071 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
CAPN3-216ENST00000567071 KCNQ5Q9NR82 932 aa12.95□□□□□ -0.34
CAPN3-216ENST00000567071 MTMR10Q9NXD2 777 aa12.95□□□□□ -0.34
CAPN3-216ENST00000567071 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-216ENST00000567071 TTC28Q96AY4 2481 aa12.95□□□□□ -0.34
CAPN3-216ENST00000567071 LRRC37AA6NMS7 1700 aa12.94□□□□□ -0.34
CAPN3-216ENST00000567071 EVI5O60447 810 aa12.94□□□□□ -0.34
CAPN3-216ENST00000567071 USP17L8P0C7I0 530 aa12.94□□□□□ -0.34
CAPN3-216ENST00000567071 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-216ENST00000567071 ZNF34Q8IZ26 560 aa12.94□□□□□ -0.34
CAPN3-216ENST00000567071 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
CAPN3-216ENST00000567071 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
CAPN3-216ENST00000567071 ANGEL1Q9UNK9 670 aaKnown RBP12.94□□□□□ -0.34
CAPN3-216ENST00000567071 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
CAPN3-216ENST00000567071 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
CAPN3-216ENST00000567071 LAMB2P55268 1798 aa12.94□□□□□ -0.34
CAPN3-216ENST00000567071 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
CAPN3-216ENST00000567071 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
CAPN3-216ENST00000567071 KIF22Q14807 665 aa12.93□□□□□ -0.34
CAPN3-216ENST00000567071 LDLRAD1Q5T700 205 aa12.93□□□□□ -0.34
CAPN3-216ENST00000567071 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
CAPN3-216ENST00000567071 ZNF646O15015 1829 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-216ENST00000567071 VCANP13611 3396 aa12.92□□□□□ -0.34
CAPN3-216ENST00000567071 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-216ENST00000567071 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
CAPN3-216ENST00000567071 TTLL7Q6ZT98 887 aa12.92□□□□□ -0.34
CAPN3-216ENST00000567071 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
CAPN3-216ENST00000567071 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
CAPN3-216ENST00000567071 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
CAPN3-216ENST00000567071 SCN9AQ15858 1988 aa12.92□□□□□ -0.34
CAPN3-216ENST00000567071 LAMB1P07942 1786 aa12.92□□□□□ -0.34
CAPN3-216ENST00000567071 PLA2G5P39877 138 aa12.91□□□□□ -0.34
CAPN3-216ENST00000567071 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
CAPN3-216ENST00000567071 SHISA4Q96DD7 197 aa12.91□□□□□ -0.34
CAPN3-216ENST00000567071 WNK4Q96J92 1243 aa12.91□□□□□ -0.34
CAPN3-216ENST00000567071 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-216ENST00000567071 PRMT2P55345 433 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms