RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 NAPBQ9H115 298 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 CYLC1P35663 651 aaPredicted RBP5□□□□□ -1.61
LPCAT2-208ENST00000566915 PRPHP41219 470 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 CETN1Q12798 172 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 CAMK4Q16566 473 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 FERMT3Q86UX7 667 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 SLF2Q8IX21 1173 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 ARFGAP2Q8N6H7 521 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 MRPS27Q92552 414 aaKnown RBP5□□□□□ -1.61
LPCAT2-208ENST00000566915 C16orf45Q96MC5 204 aaPredicted RBP5□□□□□ -1.61
LPCAT2-208ENST00000566915 SIL1Q9H173 461 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 CNNM2Q9H8M5 875 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 IQGAP1P46940 1657 aa5□□□□□ -1.61
LPCAT2-208ENST00000566915 PLEKHG3A1L390 1219 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 UQCRFS1P1P0C7P4 283 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 SDSP20132 328 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 IARSP41252 1262 aaKnown RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 STXBP4Q6ZWJ1 553 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CACNA2D4Q7Z3S7 1137 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 BRAPQ7Z569 592 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 FAM177A1Q8N128 213 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 RHPN1Q8TCX5 695 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 ORAI2Q96SN7 254 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 PLVAPQ9BX97 442 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 TNS3Q68CZ2 1445 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 RAD21O60216 631 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 ZPR1O75312 459 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 GABPB1Q06547 395 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 TMC6Q7Z403 805 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 MRPL50Q8N5N7 158 aaKnown RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 ZCRB1Q8TBF4 217 aaKnown RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 STMN4Q9H169 189 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 MBIPQ9NS73 344 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 ZBTB40Q9NUA8 1239 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 PODXL2Q9NZ53 605 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 SEC63Q9UGP8 760 aaKnown RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 PCDHB15Q9Y5E8 787 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CEP152O94986 1710 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 ATP7BP35670 1465 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CTAGE15A4D2H0 777 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CCDC175P0C221 793 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 NBPF7P0C2Y1 421 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CTAGE8P0CG41 777 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 SKILP12757 684 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 KRT83P78385 493 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 MAP2K1Q02750 393 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 ENOX2Q16206 610 aaKnown RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CTAGE6Q86UF2 777 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CTAGE4Q8IX94 777 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 NUP88Q99567 741 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 TCP11L1Q9NUJ3 509 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 LRP2BPQ9P2M1 347 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 C3P01024 1663 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 BLMP54132 1417 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 SLC5A1P13866 664 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 HCLS1P14317 486 aaPredicted RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 TRIM21P19474 475 aaKnown RBP4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 TNIP1Q15025 636 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 CATIPQ7Z7H3 387 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 IFNL2Q8IZJ0 200 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 KRT23Q9C075 422 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 ARHGAP23Q9P227 1491 aa4.99□□□□□ -1.61
LPCAT2-208ENST00000566915 SPATA31A3Q5VYP0 1347 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 KDM2BQ8NHM5 1336 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 GOLGA8AA7E2F4 631 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 GOLGA8BA8MQT2 603 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 IKQ13123 557 aaPredicted RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 RRS1Q15050 365 aaKnown RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 CAVIN4Q5BKX8 364 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 METTL24Q5JXM2 366 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 ERO1AQ96HE7 468 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 PCDH11XQ9BZA7 1347 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 PCDH11YQ9BZA8 1340 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 FYB1O15117 783 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 KDM4AO75164 1064 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 MAP4K4O95819 1239 aaPredicted RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 GCP02774 474 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 SYKP43405 635 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 GNAQP50148 359 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 IFIT5Q13325 482 aaKnown RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 FAM98CQ17RN3 349 aaKnown RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 GOLGA1Q92805 767 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 CALML4Q96GE6 196 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 LLPHQ9BRT6 129 aaKnown RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 EHMT1Q9H9B1 1298 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 ORC3Q9UBD5 711 aaPredicted RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 LAMC1P11047 1609 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 CCDC194A0A1B0GVG4 234 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 ERICH4A6NGS2 130 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 HOXB7P09629 217 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 UBASH3AP57075 661 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 GNG11P61952 73 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 VPS72Q15906 364 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 USP48Q86UV5 1035 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 NSRP1Q9H0G5 558 aaKnown RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 BOLA2Q9H3K6 86 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 IMPACTQ9P2X3 320 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 SSH2Q76I76 1423 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 PIK3C2BO00750 1634 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms