RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 LARP1BQ659C4 914 aaKnown RBP22.28■■□□□ 1.16
MSLN-207ENST00000566549 FERMT3Q86UX7 667 aa22.28■■□□□ 1.16
MSLN-207ENST00000566549 ZBTB38Q8NAP3 1195 aaPredicted RBP22.28■■□□□ 1.16
MSLN-207ENST00000566549 EXOC5O00471 708 aa22.28■■□□□ 1.16
MSLN-207ENST00000566549 KRT32Q14532 448 aa22.28■■□□□ 1.16
MSLN-207ENST00000566549 SH3TC1Q8TE82 1336 aa22.28■■□□□ 1.16
MSLN-207ENST00000566549 A0A0G2JLW4 131 aa22.27■■□□□ 1.16
MSLN-207ENST00000566549 CCDC173Q0VFZ6 552 aa22.27■■□□□ 1.16
MSLN-207ENST00000566549 IFIT5Q13325 482 aaKnown RBP22.27■■□□□ 1.16
MSLN-207ENST00000566549 GIGYF2Q6Y7W6 1299 aaKnown RBP22.27■■□□□ 1.16
MSLN-207ENST00000566549 ATP6V1DQ9Y5K8 247 aa22.27■■□□□ 1.16
MSLN-207ENST00000566549 PALLDQ8WX93 1383 aa22.27■■□□□ 1.16
MSLN-207ENST00000566549 TRIM28Q13263 835 aaKnown RBP22.27■■□□□ 1.16
MSLN-207ENST00000566549 CYP19A1P11511 503 aaPredicted RBP22.26■■□□□ 1.15
MSLN-207ENST00000566549 HSP90B1P14625 803 aaKnown RBP22.26■■□□□ 1.15
MSLN-207ENST00000566549 TTC39AQ5SRH9 613 aa22.26■■□□□ 1.15
MSLN-207ENST00000566549 Q6ZUG5 572 aa22.26■■□□□ 1.15
MSLN-207ENST00000566549 STOX1Q6ZVD7 989 aa22.26■■□□□ 1.15
MSLN-207ENST00000566549 CDC37L1Q7L3B6 337 aa22.26■■□□□ 1.15
MSLN-207ENST00000566549 XAGE2Q96GT9 111 aa22.26■■□□□ 1.15
MSLN-207ENST00000566549 KAT6BQ8WYB5 2073 aa22.26■■□□□ 1.15
MSLN-207ENST00000566549 SYAP1Q96A49 352 aaPredicted RBP22.26■■□□□ 1.15
MSLN-207ENST00000566549 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
MSLN-207ENST00000566549 BCL9O00512 1426 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 NLRP10Q86W26 655 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 TMEM87AQ8NBN3 555 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 DISP2A7MBM2 1401 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 MAST3O60307 1309 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 ADAMTS2O95450 1211 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 FGD1P98174 961 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 ZMYM1Q5SVZ6 1142 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 FAM173BQ6P4H8 233 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 GREM2Q9H772 168 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 HELLSQ9NRZ9 838 aa22.25■■□□□ 1.15
MSLN-207ENST00000566549 SCARF1Q14162 830 aa22.24■■□□□ 1.15
MSLN-207ENST00000566549 HSP90AB3PQ58FF7 597 aa22.24■■□□□ 1.15
MSLN-207ENST00000566549 CCDC158Q5M9N0 1113 aa22.24■■□□□ 1.15
MSLN-207ENST00000566549 PI16Q6UXB8 463 aa22.24■■□□□ 1.15
MSLN-207ENST00000566549 RNF113AO15541 343 aaKnown RBP22.23■■□□□ 1.15
MSLN-207ENST00000566549 BRF1Q92994 677 aa22.23■■□□□ 1.15
MSLN-207ENST00000566549 ESPNB1AK53 854 aa22.23■■□□□ 1.15
MSLN-207ENST00000566549 M0R2C6 588 aa22.23■■□□□ 1.15
MSLN-207ENST00000566549 JAK2O60674 1132 aa22.23■■□□□ 1.15
MSLN-207ENST00000566549 HSPD1P10809 573 aaKnown RBP22.23■■□□□ 1.15
MSLN-207ENST00000566549 ITGA6P23229 1130 aa22.23■■□□□ 1.15
MSLN-207ENST00000566549 CSF1RP07333 972 aa22.22■■□□□ 1.15
MSLN-207ENST00000566549 PPP1R9BQ96SB3 815 aa22.22■■□□□ 1.15
MSLN-207ENST00000566549 ALDH8A1Q9H2A2 487 aaPredicted RBP22.22■■□□□ 1.15
MSLN-207ENST00000566549 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
MSLN-207ENST00000566549 UBE2HP62256 183 aa22.22■■□□□ 1.15
MSLN-207ENST00000566549 METTL24Q5JXM2 366 aa22.22■■□□□ 1.15
MSLN-207ENST00000566549 AKAP2Q9Y2D5 859 aa22.22■■□□□ 1.15
MSLN-207ENST00000566549 LDHAL6AQ6ZMR3 332 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 OSBP2Q969R2 916 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 PLA2G12BQ9BX93 195 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 TCHHQ07283 1943 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 WASHC4Q2M389 1173 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 TTLL5Q6EMB2 1281 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 TTLL11Q8NHH1 800 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 ACSBG1Q96GR2 724 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 TSPY26PQ9H489 355 aa22.21■■□□□ 1.15
MSLN-207ENST00000566549 IRS4O14654 1257 aaPredicted RBP22.2■■□□□ 1.14
MSLN-207ENST00000566549 ZAP70P43403 619 aa22.2■■□□□ 1.14
MSLN-207ENST00000566549 DZIP3Q86Y13 1208 aaKnown RBP22.2■■□□□ 1.14
MSLN-207ENST00000566549 FAM177BA6PVY3 158 aa22.2■■□□□ 1.14
MSLN-207ENST00000566549 CHST3Q7LGC8 479 aa22.2■■□□□ 1.14
MSLN-207ENST00000566549 GTF3C6Q969F1 213 aa22.2■■□□□ 1.14
MSLN-207ENST00000566549 DDX11Q96FC9 970 aa22.2■■□□□ 1.14
MSLN-207ENST00000566549 DSCC1Q9BVC3 393 aa22.2■■□□□ 1.14
MSLN-207ENST00000566549 CNNM1Q9NRU3 951 aa22.2■■□□□ 1.14
MSLN-207ENST00000566549 CTSWP56202 376 aa22.19■■□□□ 1.14
MSLN-207ENST00000566549 PDCP20941 246 aa22.19■■□□□ 1.14
MSLN-207ENST00000566549 ATP2B3Q16720 1220 aa22.19■■□□□ 1.14
MSLN-207ENST00000566549 NAP1L2Q9ULW6 460 aaPredicted RBP22.19■■□□□ 1.14
MSLN-207ENST00000566549 ITGB4P16144 1822 aa22.18■■□□□ 1.14
MSLN-207ENST00000566549 PPFIA3O75145 1194 aa22.18■■□□□ 1.14
MSLN-207ENST00000566549 PHF14O94880 888 aa22.18■■□□□ 1.14
MSLN-207ENST00000566549 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.18■■□□□ 1.14
MSLN-207ENST00000566549 CCDC183Q5T5S1 534 aa22.18■■□□□ 1.14
MSLN-207ENST00000566549 RIC1Q4ADV7 1423 aa22.18■■□□□ 1.14
MSLN-207ENST00000566549 ANKRD18BA2A2Z9 1011 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 E7EWF7 191 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 APOBRQ0VD83 1088 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 SCRN1Q12765 414 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 FBXO3Q9UK99 471 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 RIPOR2Q9Y4F9 1068 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 CDHR2Q9BYE9 1310 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 COL14A1Q05707 1796 aaKnown RBP22.17■■□□□ 1.14
MSLN-207ENST00000566549 ROBO1Q9Y6N7 1651 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 FOSBP53539 338 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 HAND2P61296 217 aa22.17■■□□□ 1.14
MSLN-207ENST00000566549 DHX32Q7L7V1 743 aaKnown RBP22.17■■□□□ 1.14
MSLN-207ENST00000566549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.17■■□□□ 1.14
MSLN-207ENST00000566549 CLCN1P35523 988 aa22.16■■□□□ 1.14
MSLN-207ENST00000566549 CCT2P78371 535 aaKnown RBP22.15■■□□□ 1.14
MSLN-207ENST00000566549 KRT85P78386 507 aa22.15■■□□□ 1.14
MSLN-207ENST00000566549 CSPP1Q1MSJ5 1256 aa22.15■■□□□ 1.14
MSLN-207ENST00000566549 TTC6Q86TZ1 520 aa22.15■■□□□ 1.14
MSLN-207ENST00000566549 TFIP11Q9UBB9 837 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms