RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 KSR2Q6VAB6 950 aa28.69■■■□□ 2.18
GGA2-206ENST00000566547 EYA3Q99504 573 aa28.69■■■□□ 2.18
GGA2-206ENST00000566547 RTL9Q8NET4 1388 aa28.69■■■□□ 2.18
GGA2-206ENST00000566547 H7C1D1 291 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 UFL1O94874 794 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 CELF2O95319 508 aaKnown RBP28.68■■■□□ 2.18
GGA2-206ENST00000566547 TWISTNBQ3B726 338 aaPredicted RBP28.68■■■□□ 2.18
GGA2-206ENST00000566547 DLK2Q6UY11 383 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 SAMD7Q7Z3H4 446 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 CAPNS2Q96L46 248 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 MRS2Q9HD23 443 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 ANKIB1Q9P2G1 1089 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 PGAP2Q9UHJ9 254 aa28.68■■■□□ 2.18
GGA2-206ENST00000566547 SALL2Q9Y467 1007 aaPredicted RBP28.68■■■□□ 2.18
GGA2-206ENST00000566547 EGFRP00533 1210 aa28.67■■■□□ 2.18
GGA2-206ENST00000566547 HSP90B1P14625 803 aaKnown RBP28.67■■■□□ 2.18
GGA2-206ENST00000566547 STK31Q9BXU1 1019 aa28.67■■■□□ 2.18
GGA2-206ENST00000566547 ZNF408Q9H9D4 720 aa28.67■■■□□ 2.18
GGA2-206ENST00000566547 TLL2Q9Y6L7 1015 aa28.67■■■□□ 2.18
GGA2-206ENST00000566547 SPEF2Q9C093 1822 aa28.66■■■□□ 2.18
GGA2-206ENST00000566547 CTCFP49711 727 aaPredicted RBP28.66■■■□□ 2.18
GGA2-206ENST00000566547 CWF19L2Q2TBE0 894 aaKnown RBP28.66■■■□□ 2.18
GGA2-206ENST00000566547 TBC1D10BQ4KMP7 808 aaPredicted RBP28.66■■■□□ 2.18
GGA2-206ENST00000566547 CHMP4AQ9BY43 222 aa28.66■■■□□ 2.18
GGA2-206ENST00000566547 ZC3H12CQ9C0D7 883 aaKnown RBP28.66■■■□□ 2.18
GGA2-206ENST00000566547 PODXL2Q9NZ53 605 aa28.66■■■□□ 2.18
GGA2-206ENST00000566547 LBX1P52954 281 aa28.65■■■□□ 2.18
GGA2-206ENST00000566547 SLC4A2P04920 1241 aa28.64■■■□□ 2.18
GGA2-206ENST00000566547 RBM26Q5T8P6 1007 aaKnown RBP28.64■■■□□ 2.18
GGA2-206ENST00000566547 ZC3H15Q8WU90 426 aaKnown RBP28.64■■■□□ 2.18
GGA2-206ENST00000566547 DPF2Q92785 391 aa28.64■■■□□ 2.18
GGA2-206ENST00000566547 GGA1Q9UJY5 639 aa28.64■■■□□ 2.18
GGA2-206ENST00000566547 MYH3P11055 1940 aa28.64■■■□□ 2.18
GGA2-206ENST00000566547 POLR2AP24928 1970 aaKnown RBP28.64■■■□□ 2.17
GGA2-206ENST00000566547 THSD7BQ9C0I4 1608 aa28.63■■■□□ 2.17
GGA2-206ENST00000566547 USP48Q86UV5 1035 aa28.63■■■□□ 2.17
GGA2-206ENST00000566547 ANKRD18AQ8IVF6 992 aa28.63■■■□□ 2.17
GGA2-206ENST00000566547 WTIPA6NIX2 430 aaPredicted RBP28.62■■■□□ 2.17
GGA2-206ENST00000566547 AOC2O75106 756 aa28.62■■■□□ 2.17
GGA2-206ENST00000566547 CTSWP56202 376 aa28.62■■■□□ 2.17
GGA2-206ENST00000566547 PRDM10Q9NQV6 1147 aa28.62■■■□□ 2.17
GGA2-206ENST00000566547 NEURL1BA8MQ27 555 aa28.61■■■□□ 2.17
GGA2-206ENST00000566547 G3V3G9 751 aa28.61■■■□□ 2.17
GGA2-206ENST00000566547 MAP2K1Q02750 393 aaPredicted RBP28.61■■■□□ 2.17
GGA2-206ENST00000566547 NEXNQ0ZGT2 675 aa28.61■■■□□ 2.17
GGA2-206ENST00000566547 DCAF8Q5TAQ9 597 aa28.61■■■□□ 2.17
GGA2-206ENST00000566547 CDC37L1Q7L3B6 337 aa28.61■■■□□ 2.17
GGA2-206ENST00000566547 SAPCD2Q86UD0 394 aa28.61■■■□□ 2.17
GGA2-206ENST00000566547 IL16Q14005 1332 aa28.61■■■□□ 2.17
GGA2-206ENST00000566547 HSPA8P11142 646 aaKnown RBP28.6■■■□□ 2.17
GGA2-206ENST00000566547 ECE1P42892 770 aa28.6■■■□□ 2.17
GGA2-206ENST00000566547 TTLL11Q8NHH1 800 aa28.6■■■□□ 2.17
GGA2-206ENST00000566547 GREM2Q9H772 168 aa28.6■■■□□ 2.17
GGA2-206ENST00000566547 FANCIQ9NVI1 1328 aa28.6■■■□□ 2.17
GGA2-206ENST00000566547 RPS12P25398 132 aaKnown RBP28.59■■■□□ 2.17
GGA2-206ENST00000566547 VIL1P09327 827 aaKnown RBP28.58■■■□□ 2.17
GGA2-206ENST00000566547 UBE3BQ7Z3V4 1068 aa28.58■■■□□ 2.17
GGA2-206ENST00000566547 XDHP47989 1333 aa28.58■■■□□ 2.17
GGA2-206ENST00000566547 FLIIQ13045 1269 aa28.57■■■□□ 2.16
GGA2-206ENST00000566547 NCBP3Q53F19 620 aaKnown RBP28.57■■■□□ 2.16
GGA2-206ENST00000566547 ADM5C9JUS6 153 aa28.56■■■□□ 2.16
GGA2-206ENST00000566547 ASTN2O75129 1339 aaPredicted RBP28.56■■■□□ 2.16
GGA2-206ENST00000566547 CDC5LQ99459 802 aaKnown RBP28.56■■■□□ 2.16
GGA2-206ENST00000566547 PSME4Q14997 1843 aa28.55■■■□□ 2.16
GGA2-206ENST00000566547 H7C1W4 665 aa28.55■■■□□ 2.16
GGA2-206ENST00000566547 KRT26Q7Z3Y9 468 aa28.55■■■□□ 2.16
GGA2-206ENST00000566547 ATP2B4P23634 1241 aa28.54■■■□□ 2.16
GGA2-206ENST00000566547 FKBP5Q13451 457 aaPredicted RBP28.54■■■□□ 2.16
GGA2-206ENST00000566547 KIF4BQ2VIQ3 1234 aa28.54■■■□□ 2.16
GGA2-206ENST00000566547 TSKSQ9UJT2 592 aa28.54■■■□□ 2.16
GGA2-206ENST00000566547 MINPP1Q9UNW1 487 aa28.54■■■□□ 2.16
GGA2-206ENST00000566547 EXOSC9Q06265 439 aaKnown RBP28.53■■■□□ 2.16
GGA2-206ENST00000566547 GCKRQ14397 625 aa28.53■■■□□ 2.16
GGA2-206ENST00000566547 SPINK5Q9NQ38 1064 aaPredicted RBP28.53■■■□□ 2.16
GGA2-206ENST00000566547 VAMP4O75379 141 aa28.52■■■□□ 2.16
GGA2-206ENST00000566547 RSBN1LQ6PCB5 846 aaPredicted RBP28.52■■■□□ 2.16
GGA2-206ENST00000566547 DCPSQ96C86 337 aaKnown RBP28.52■■■□□ 2.16
GGA2-206ENST00000566547 BSDC1Q9NW68 430 aaPredicted RBP28.52■■■□□ 2.16
GGA2-206ENST00000566547 DNAAF4Q8WXU2 420 aa28.51■■■□□ 2.15
GGA2-206ENST00000566547 BEGAINQ9BUH8 593 aa28.51■■■□□ 2.15
GGA2-206ENST00000566547 GGA3Q9NZ52 723 aa28.51■■■□□ 2.15
GGA2-206ENST00000566547 CACNA1FO60840 1977 aa28.51■■■□□ 2.15
GGA2-206ENST00000566547 CASP7P55210 303 aa28.5■■■□□ 2.15
GGA2-206ENST00000566547 HUNKP57058 714 aa28.5■■■□□ 2.15
GGA2-206ENST00000566547 WDR63Q8IWG1 891 aa28.5■■■□□ 2.15
GGA2-206ENST00000566547 MAP2K2P36507 400 aa28.49■■■□□ 2.15
GGA2-206ENST00000566547 FAM161AQ3B820 660 aa28.49■■■□□ 2.15
GGA2-206ENST00000566547 HHIPL1Q96JK4 782 aa28.49■■■□□ 2.15
GGA2-206ENST00000566547 ZIC5Q96T25 663 aa28.49■■■□□ 2.15
GGA2-206ENST00000566547 CCT4P50991 539 aaKnown RBP28.48■■■□□ 2.15
GGA2-206ENST00000566547 FAM9BQ8IZU0 186 aa28.48■■■□□ 2.15
GGA2-206ENST00000566547 AGBL3Q8NEM8 1001 aa28.48■■■□□ 2.15
GGA2-206ENST00000566547 GMLQ99445 158 aa28.48■■■□□ 2.15
GGA2-206ENST00000566547 MXD3Q9BW11 206 aa28.48■■■□□ 2.15
GGA2-206ENST00000566547 USP17L3A6NCW0 530 aa28.47■■■□□ 2.15
GGA2-206ENST00000566547 USP17L4A6NCW7 530 aa28.47■■■□□ 2.15
GGA2-206ENST00000566547 ITGA6P23229 1130 aa28.47■■■□□ 2.15
GGA2-206ENST00000566547 ZNF280AP59817 542 aaPredicted RBP28.47■■■□□ 2.15
GGA2-206ENST00000566547 USP17L1Q7RTZ2 530 aa28.47■■■□□ 2.15
GGA2-206ENST00000566547 TXNRD3Q86VQ6 643 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 336.5 ms