RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 MAP1SQ66K74 1059 aaPredicted RBP25.4■■□□□ 1.66
TRADD-204ENST00000566104 TTLL11Q8NHH1 800 aa25.4■■□□□ 1.66
TRADD-204ENST00000566104 ZC3H12CQ9C0D7 883 aaKnown RBP25.4■■□□□ 1.66
TRADD-204ENST00000566104 XDHP47989 1333 aa25.39■■□□□ 1.66
TRADD-204ENST00000566104 YDJCA8MPS7 323 aa25.39■■□□□ 1.66
TRADD-204ENST00000566104 RIMBP2O15034 1052 aa25.39■■□□□ 1.66
TRADD-204ENST00000566104 PLA2G12BQ9BX93 195 aa25.39■■□□□ 1.66
TRADD-204ENST00000566104 DBNDD1Q9H9R9 158 aa25.39■■□□□ 1.66
TRADD-204ENST00000566104 TMEM88BA6NKF7 163 aa25.38■■□□□ 1.65
TRADD-204ENST00000566104 SCN9AQ15858 1988 aa25.37■■□□□ 1.65
TRADD-204ENST00000566104 G3V3G9 751 aa25.37■■□□□ 1.65
TRADD-204ENST00000566104 ECE2O60344 883 aa25.37■■□□□ 1.65
TRADD-204ENST00000566104 DCAF8Q5TAQ9 597 aa25.37■■□□□ 1.65
TRADD-204ENST00000566104 GREM2Q9H772 168 aa25.37■■□□□ 1.65
TRADD-204ENST00000566104 BSDC1Q9NW68 430 aaPredicted RBP25.36■■□□□ 1.65
TRADD-204ENST00000566104 CNTNAP1P78357 1384 aa25.34■■□□□ 1.65
TRADD-204ENST00000566104 E9PSI1 815 aa25.34■■□□□ 1.65
TRADD-204ENST00000566104 PSMD14O00487 310 aa25.34■■□□□ 1.65
TRADD-204ENST00000566104 ATP2B4P23634 1241 aa25.34■■□□□ 1.65
TRADD-204ENST00000566104 RPS12P25398 132 aaKnown RBP25.34■■□□□ 1.65
TRADD-204ENST00000566104 IGHMBP2P38935 993 aaKnown RBP25.34■■□□□ 1.65
TRADD-204ENST00000566104 DPF2Q92785 391 aa25.34■■□□□ 1.65
TRADD-204ENST00000566104 F6X3S4 739 aa25.33■■□□□ 1.65
TRADD-204ENST00000566104 H7C1D1 291 aa25.33■■□□□ 1.65
TRADD-204ENST00000566104 CASP7P55210 303 aa25.33■■□□□ 1.65
TRADD-204ENST00000566104 DOK7Q18PE1 504 aa25.33■■□□□ 1.65
TRADD-204ENST00000566104 GPR101Q96P66 508 aaPredicted RBP25.33■■□□□ 1.65
TRADD-204ENST00000566104 MKRN1Q9UHC7 482 aaKnown RBP25.33■■□□□ 1.65
TRADD-204ENST00000566104 CNOT7Q9UIV1 285 aaKnown RBP25.33■■□□□ 1.65
TRADD-204ENST00000566104 BEND3Q5T5X7 828 aa25.32■■□□□ 1.64
TRADD-204ENST00000566104 ZC3H15Q8WU90 426 aaKnown RBP25.32■■□□□ 1.64
TRADD-204ENST00000566104 CCER2I3L3R5 266 aa25.31■■□□□ 1.64
TRADD-204ENST00000566104 ITGA6P23229 1130 aa25.31■■□□□ 1.64
TRADD-204ENST00000566104 MICALL2Q8IY33 904 aa25.31■■□□□ 1.64
TRADD-204ENST00000566104 MED23Q9ULK4 1368 aa25.31■■□□□ 1.64
TRADD-204ENST00000566104 CSF1RP07333 972 aa25.3■■□□□ 1.64
TRADD-204ENST00000566104 FAM161AQ3B820 660 aa25.3■■□□□ 1.64
TRADD-204ENST00000566104 MINPP1Q9UNW1 487 aa25.3■■□□□ 1.64
TRADD-204ENST00000566104 ZBTB12Q9Y330 459 aaPredicted RBP25.3■■□□□ 1.64
TRADD-204ENST00000566104 ZNF609O15014 1411 aa25.29■■□□□ 1.64
TRADD-204ENST00000566104 A0A1B0GUL6 1792 aa25.29■■□□□ 1.64
TRADD-204ENST00000566104 MPHOSPH8Q99549 860 aa25.29■■□□□ 1.64
TRADD-204ENST00000566104 ALDH1L1O75891 902 aa25.28■■□□□ 1.64
TRADD-204ENST00000566104 PCNTO95613 3336 aa25.27■■□□□ 1.64
TRADD-204ENST00000566104 ANKRD18BA2A2Z9 1011 aa25.27■■□□□ 1.64
TRADD-204ENST00000566104 GRM8O00222 908 aa25.27■■□□□ 1.64
TRADD-204ENST00000566104 VIL1P09327 827 aaKnown RBP25.27■■□□□ 1.64
TRADD-204ENST00000566104 CCT4P50991 539 aaKnown RBP25.27■■□□□ 1.64
TRADD-204ENST00000566104 TRPM4Q8TD43 1214 aa25.27■■□□□ 1.64
TRADD-204ENST00000566104 SRCIN1Q9C0H9 1055 aa25.27■■□□□ 1.64
TRADD-204ENST00000566104 ANKRD2Q9GZV1 360 aa25.27■■□□□ 1.64
TRADD-204ENST00000566104 PGAP2Q9UHJ9 254 aa25.27■■□□□ 1.64
TRADD-204ENST00000566104 ABT1Q9ULW3 272 aaKnown RBP25.27■■□□□ 1.64
TRADD-204ENST00000566104 SLC4A10Q6U841 1118 aa25.26■■□□□ 1.63
TRADD-204ENST00000566104 PODNQ7Z5L7 613 aa25.26■■□□□ 1.63
TRADD-204ENST00000566104 C9orf78Q9NZ63 289 aaPredicted RBP25.26■■□□□ 1.63
TRADD-204ENST00000566104 LEMD3Q9Y2U8 911 aa25.26■■□□□ 1.63
TRADD-204ENST00000566104 RASSF10A6NK89 507 aa25.25■■□□□ 1.63
TRADD-204ENST00000566104 SLFN5Q08AF3 891 aa25.25■■□□□ 1.63
TRADD-204ENST00000566104 IFIT5Q13325 482 aaKnown RBP25.25■■□□□ 1.63
TRADD-204ENST00000566104 KCNQ5Q9NR82 932 aa25.25■■□□□ 1.63
TRADD-204ENST00000566104 POLR2AP24928 1970 aaKnown RBP25.24■■□□□ 1.63
TRADD-204ENST00000566104 PTPRCP08575 1304 aa25.24■■□□□ 1.63
TRADD-204ENST00000566104 HSPA1AP0DMV8 641 aaKnown RBP25.24■■□□□ 1.63
TRADD-204ENST00000566104 HSPA1BP0DMV9 641 aaKnown RBP25.24■■□□□ 1.63
TRADD-204ENST00000566104 HIRAP54198 1017 aaPredicted RBP25.24■■□□□ 1.63
TRADD-204ENST00000566104 DEFB115Q30KQ5 88 aa25.24■■□□□ 1.63
TRADD-204ENST00000566104 CHMP3Q9Y3E7 222 aa25.24■■□□□ 1.63
TRADD-204ENST00000566104 ZNF646O15015 1829 aaPredicted RBP25.23■■□□□ 1.63
TRADD-204ENST00000566104 SHTN1A0MZ66 631 aa25.23■■□□□ 1.63
TRADD-204ENST00000566104 TRAF5O00463 557 aa25.23■■□□□ 1.63
TRADD-204ENST00000566104 FOXO4P98177 505 aa25.23■■□□□ 1.63
TRADD-204ENST00000566104 CDC37L1Q7L3B6 337 aa25.23■■□□□ 1.63
TRADD-204ENST00000566104 AGBL3Q8NEM8 1001 aa25.23■■□□□ 1.63
TRADD-204ENST00000566104 RSBN1LQ6PCB5 846 aaPredicted RBP25.22■■□□□ 1.63
TRADD-204ENST00000566104 SAMD7Q7Z3H4 446 aa25.22■■□□□ 1.63
TRADD-204ENST00000566104 ZNF804BA4D1E1 1349 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 USP17L3A6NCW0 530 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 USP17L4A6NCW7 530 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 KCNJ4P48050 445 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 VEGFBP49765 207 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 KIF4BQ2VIQ3 1234 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 TBC1D10BQ4KMP7 808 aaPredicted RBP25.21■■□□□ 1.63
TRADD-204ENST00000566104 USP17L1Q7RTZ2 530 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 MRPL50Q8N5N7 158 aaKnown RBP25.21■■□□□ 1.63
TRADD-204ENST00000566104 GLIS2Q9BZE0 524 aaPredicted RBP25.21■■□□□ 1.63
TRADD-204ENST00000566104 COA1Q9GZY4 146 aa25.21■■□□□ 1.63
TRADD-204ENST00000566104 THSD7BQ9C0I4 1608 aa25.2■■□□□ 1.62
TRADD-204ENST00000566104 CHRNDQ07001 517 aa25.2■■□□□ 1.62
TRADD-204ENST00000566104 CCDC57Q2TAC2 916 aa25.2■■□□□ 1.62
TRADD-204ENST00000566104 LMBR1LQ6UX01 489 aa25.2■■□□□ 1.62
TRADD-204ENST00000566104 FMR1Q06787 632 aaKnown RBP eCLIP25.19■■□□□ 1.62
TRADD-204ENST00000566104 TAF7LQ5H9L4 462 aa25.19■■□□□ 1.62
TRADD-204ENST00000566104 MYO3BQ8WXR4 1341 aa25.18■■□□□ 1.62
TRADD-204ENST00000566104 CELF2O95319 508 aaKnown RBP25.18■■□□□ 1.62
TRADD-204ENST00000566104 ALDH1L2Q3SY69 923 aa25.18■■□□□ 1.62
TRADD-204ENST00000566104 CST9Q5W186 159 aa25.18■■□□□ 1.62
TRADD-204ENST00000566104 SSH1Q8WYL5 1049 aa25.18■■□□□ 1.62
TRADD-204ENST00000566104 DCPSQ96C86 337 aaKnown RBP25.18■■□□□ 1.62
TRADD-204ENST00000566104 TLL2Q9Y6L7 1015 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms