RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 POLD1P28340 1107 aa22.59■■□□□ 1.21
EDC3-208ENST00000565602 RBM25P49756 843 aaKnown RBP22.59■■□□□ 1.21
EDC3-208ENST00000565602 OS9Q13438 667 aaPredicted RBP22.58■■□□□ 1.21
EDC3-208ENST00000565602 BECN1Q14457 450 aa22.58■■□□□ 1.21
EDC3-208ENST00000565602 CASC1Q6TDU7 716 aa22.58■■□□□ 1.21
EDC3-208ENST00000565602 SIL1Q9H173 461 aa22.58■■□□□ 1.21
EDC3-208ENST00000565602 ERC1Q8IUD2 1116 aa22.58■■□□□ 1.2
EDC3-208ENST00000565602 PUS3Q9BZE2 481 aaKnown RBP22.58■■□□□ 1.2
EDC3-208ENST00000565602 SRGNP10124 158 aa22.57■■□□□ 1.2
EDC3-208ENST00000565602 HOXA10P31260 410 aaPredicted RBP22.57■■□□□ 1.2
EDC3-208ENST00000565602 PDE6BP35913 854 aa22.57■■□□□ 1.2
EDC3-208ENST00000565602 SLC4A3P48751 1232 aa22.57■■□□□ 1.2
EDC3-208ENST00000565602 LRRC24Q50LG9 513 aa22.57■■□□□ 1.2
EDC3-208ENST00000565602 ATG9AQ7Z3C6 839 aa22.57■■□□□ 1.2
EDC3-208ENST00000565602 CELF1Q92879 486 aaKnown RBP22.57■■□□□ 1.2
EDC3-208ENST00000565602 TSHZ3Q63HK5 1081 aa22.56■■□□□ 1.2
EDC3-208ENST00000565602 EYA2O00167 538 aa22.56■■□□□ 1.2
EDC3-208ENST00000565602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.56■■□□□ 1.2
EDC3-208ENST00000565602 LRRC37AA6NMS7 1700 aa22.55■■□□□ 1.2
EDC3-208ENST00000565602 BRCA1P38398 1863 aaKnown RBP22.55■■□□□ 1.2
EDC3-208ENST00000565602 SASH1O94885 1247 aa22.55■■□□□ 1.2
EDC3-208ENST00000565602 DDX46Q7L014 1031 aaKnown RBP22.55■■□□□ 1.2
EDC3-208ENST00000565602 RPGRQ92834 1020 aaKnown RBP22.55■■□□□ 1.2
EDC3-208ENST00000565602 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
EDC3-208ENST00000565602 CIAO1O76071 339 aa22.54■■□□□ 1.2
EDC3-208ENST00000565602 TAF7LQ5H9L4 462 aa22.54■■□□□ 1.2
EDC3-208ENST00000565602 FBXO3Q9UK99 471 aa22.54■■□□□ 1.2
EDC3-208ENST00000565602 RIPOR2Q9Y4F9 1068 aa22.54■■□□□ 1.2
EDC3-208ENST00000565602 SPON1Q9HCB6 807 aa22.54■■□□□ 1.2
EDC3-208ENST00000565602 G3BP1Q13283 466 aaKnown RBP eCLIP22.53■■□□□ 1.2
EDC3-208ENST00000565602 GRAPQ13588 217 aa22.53■■□□□ 1.2
EDC3-208ENST00000565602 LDHAL6AQ6ZMR3 332 aa22.53■■□□□ 1.2
EDC3-208ENST00000565602 C2CD5Q86YS7 1000 aa22.53■■□□□ 1.2
EDC3-208ENST00000565602 GRAPLQ8TC17 118 aaPredicted RBP22.53■■□□□ 1.2
EDC3-208ENST00000565602 CRAMP1Q96RY5 1269 aa22.53■■□□□ 1.2
EDC3-208ENST00000565602 SLX4Q8IY92 1834 aa22.52■■□□□ 1.2
EDC3-208ENST00000565602 NPR1P16066 1061 aa22.52■■□□□ 1.2
EDC3-208ENST00000565602 CHRNA5P30532 468 aa22.52■■□□□ 1.2
EDC3-208ENST00000565602 ANKRD18AQ8IVF6 992 aa22.52■■□□□ 1.2
EDC3-208ENST00000565602 RBM17Q96I25 401 aaKnown RBP22.52■■□□□ 1.2
EDC3-208ENST00000565602 IGHMBP2P38935 993 aaKnown RBP22.51■■□□□ 1.19
EDC3-208ENST00000565602 IL15P40933 162 aaPredicted RBP22.51■■□□□ 1.19
EDC3-208ENST00000565602 RPS8P62241 208 aaKnown RBP22.51■■□□□ 1.19
EDC3-208ENST00000565602 CLASRPQ8N2M8 674 aaKnown RBP22.51■■□□□ 1.19
EDC3-208ENST00000565602 SLC51AQ86UW1 340 aa22.51■■□□□ 1.19
EDC3-208ENST00000565602 MASTLQ96GX5 879 aa22.51■■□□□ 1.19
EDC3-208ENST00000565602 H0YIN7 160 aa22.5■■□□□ 1.19
EDC3-208ENST00000565602 MPHOSPH8Q99549 860 aa22.5■■□□□ 1.19
EDC3-208ENST00000565602 CNNM1Q9NRU3 951 aa22.5■■□□□ 1.19
EDC3-208ENST00000565602 BSDC1Q9NW68 430 aaPredicted RBP22.5■■□□□ 1.19
EDC3-208ENST00000565602 LTBP1Q14766 1721 aa22.5■■□□□ 1.19
EDC3-208ENST00000565602 TTC41PQ6P2S7 1318 aa22.5■■□□□ 1.19
EDC3-208ENST00000565602 VGLL2Q8N8G2 317 aa22.49■■□□□ 1.19
EDC3-208ENST00000565602 PI4K2BQ8TCG2 481 aa22.49■■□□□ 1.19
EDC3-208ENST00000565602 TFCP2Q12800 502 aa22.49■■□□□ 1.19
EDC3-208ENST00000565602 STYK1Q6J9G0 422 aa22.49■■□□□ 1.19
EDC3-208ENST00000565602 ARAP2Q8WZ64 1704 aa22.48■■□□□ 1.19
EDC3-208ENST00000565602 TRIM6-TRIM34B2RNG4 842 aa22.48■■□□□ 1.19
EDC3-208ENST00000565602 KCNA3P22001 575 aa22.48■■□□□ 1.19
EDC3-208ENST00000565602 TBC1D2Q9BYX2 928 aa22.48■■□□□ 1.19
EDC3-208ENST00000565602 RILPL2Q969X0 211 aa22.47■■□□□ 1.19
EDC3-208ENST00000565602 GOLGB1Q14789 3259 aaKnown RBP22.47■■□□□ 1.19
EDC3-208ENST00000565602 DPEP1P16444 411 aa22.47■■□□□ 1.19
EDC3-208ENST00000565602 GPATCH3Q96I76 525 aa22.47■■□□□ 1.19
EDC3-208ENST00000565602 MINPP1Q9UNW1 487 aa22.47■■□□□ 1.19
EDC3-208ENST00000565602 CD2APQ9Y5K6 639 aa22.47■■□□□ 1.19
EDC3-208ENST00000565602 MROH5Q6ZUA9 1318 aa22.46■■□□□ 1.19
EDC3-208ENST00000565602 ERC2O15083 957 aa22.46■■□□□ 1.19
EDC3-208ENST00000565602 REC8O95072 547 aa22.46■■□□□ 1.19
EDC3-208ENST00000565602 ZNF622Q969S3 477 aaKnown RBP eCLIP22.46■■□□□ 1.19
EDC3-208ENST00000565602 ZNF609O15014 1411 aa22.46■■□□□ 1.19
EDC3-208ENST00000565602 A0A0G2JLW4 131 aa22.45■■□□□ 1.19
EDC3-208ENST00000565602 BBOX1O75936 387 aa22.45■■□□□ 1.19
EDC3-208ENST00000565602 IFIT2P09913 472 aaKnown RBP22.45■■□□□ 1.19
EDC3-208ENST00000565602 ALDH1B1P30837 517 aa22.45■■□□□ 1.19
EDC3-208ENST00000565602 TGFB2P61812 414 aa22.45■■□□□ 1.19
EDC3-208ENST00000565602 CHRNDQ07001 517 aa22.45■■□□□ 1.19
EDC3-208ENST00000565602 METTL24Q5JXM2 366 aa22.45■■□□□ 1.19
EDC3-208ENST00000565602 SRCAPQ6ZRS2 3230 aa22.45■■□□□ 1.18
EDC3-208ENST00000565602 AACSQ86V21 672 aa22.45■■□□□ 1.18
EDC3-208ENST00000565602 GLRX3O76003 335 aaKnown RBP22.44■■□□□ 1.18
EDC3-208ENST00000565602 HELBQ8NG08 1087 aaPredicted RBP22.44■■□□□ 1.18
EDC3-208ENST00000565602 EAF2Q96CJ1 260 aaPredicted RBP22.44■■□□□ 1.18
EDC3-208ENST00000565602 KIF2CQ99661 725 aa22.44■■□□□ 1.18
EDC3-208ENST00000565602 USP26Q9BXU7 913 aa22.44■■□□□ 1.18
EDC3-208ENST00000565602 CEP126Q9P2H0 1117 aa22.44■■□□□ 1.18
EDC3-208ENST00000565602 PPEF1O14829 653 aaPredicted RBP22.43■■□□□ 1.18
EDC3-208ENST00000565602 PDE8BO95263 885 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 TNNI3KQ59H18 835 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 ECHDC1Q9NTX5 307 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 FPGT-TNNI3KV9GXZ4 949 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 TAF5LO75529 589 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 CHMLP26374 656 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 PRPF40BQ6NWY9 871 aaKnown RBP22.43■■□□□ 1.18
EDC3-208ENST00000565602 ESYT1Q9BSJ8 1104 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 GPR108Q9NPR9 543 aa22.43■■□□□ 1.18
EDC3-208ENST00000565602 PPP1R1BQ9UD71 204 aaPredicted RBP22.43■■□□□ 1.18
EDC3-208ENST00000565602 HSCBQ8IWL3 235 aa22.42■■□□□ 1.18
EDC3-208ENST00000565602 CNTROBQ8N137 903 aa22.42■■□□□ 1.18
EDC3-208ENST00000565602 CNKSR1Q969H4 720 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms