RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 PODXL2Q9NZ53 605 aa30.52■■■□□ 2.48
RAB40C-209ENST00000565511 CNOT7Q9UIV1 285 aaKnown RBP30.52■■■□□ 2.48
RAB40C-209ENST00000565511 THSD7BQ9C0I4 1608 aa30.51■■■□□ 2.48
RAB40C-209ENST00000565511 NEURL1BA8MQ27 555 aa30.51■■■□□ 2.47
RAB40C-209ENST00000565511 CTSWP56202 376 aa30.51■■■□□ 2.47
RAB40C-209ENST00000565511 MICALL2Q8IY33 904 aa30.51■■■□□ 2.47
RAB40C-209ENST00000565511 GLIS2Q9BZE0 524 aaPredicted RBP30.51■■■□□ 2.47
RAB40C-209ENST00000565511 ABT1Q9ULW3 272 aaKnown RBP30.51■■■□□ 2.47
RAB40C-209ENST00000565511 CACNA1FO60840 1977 aa30.51■■■□□ 2.47
RAB40C-209ENST00000565511 PSME4Q14997 1843 aa30.5■■■□□ 2.47
RAB40C-209ENST00000565511 FOXN1O15353 648 aa30.5■■■□□ 2.47
RAB40C-209ENST00000565511 UFL1O94874 794 aa30.5■■■□□ 2.47
RAB40C-209ENST00000565511 CHMP4AQ9BY43 222 aa30.5■■■□□ 2.47
RAB40C-209ENST00000565511 WTIPA6NIX2 430 aaPredicted RBP30.49■■■□□ 2.47
RAB40C-209ENST00000565511 EGFRP00533 1210 aa30.49■■■□□ 2.47
RAB40C-209ENST00000565511 DEFB115Q30KQ5 88 aa30.49■■■□□ 2.47
RAB40C-209ENST00000565511 PGAP2Q9UHJ9 254 aa30.49■■■□□ 2.47
RAB40C-209ENST00000565511 HSP90B1P14625 803 aaKnown RBP30.48■■■□□ 2.47
RAB40C-209ENST00000565511 FLIIQ13045 1269 aa30.48■■■□□ 2.47
RAB40C-209ENST00000565511 EYA3Q99504 573 aa30.48■■■□□ 2.47
RAB40C-209ENST00000565511 POLR2AP24928 1970 aaKnown RBP30.47■■■□□ 2.47
RAB40C-209ENST00000565511 EXOSC9Q06265 439 aaKnown RBP30.47■■■□□ 2.47
RAB40C-209ENST00000565511 SAMD7Q7Z3H4 446 aa30.47■■■□□ 2.47
RAB40C-209ENST00000565511 TTLL11Q8NHH1 800 aa30.47■■■□□ 2.47
RAB40C-209ENST00000565511 GREM2Q9H772 168 aa30.47■■■□□ 2.47
RAB40C-209ENST00000565511 ZNF646O15015 1829 aaPredicted RBP30.46■■■□□ 2.47
RAB40C-209ENST00000565511 VAMP4O75379 141 aa30.46■■■□□ 2.47
RAB40C-209ENST00000565511 DLK2Q6UY11 383 aa30.46■■■□□ 2.47
RAB40C-209ENST00000565511 WDR63Q8IWG1 891 aa30.46■■■□□ 2.47
RAB40C-209ENST00000565511 ANKIB1Q9P2G1 1089 aa30.46■■■□□ 2.47
RAB40C-209ENST00000565511 GGA1Q9UJY5 639 aa30.46■■■□□ 2.47
RAB40C-209ENST00000565511 NEXNQ0ZGT2 675 aa30.45■■■□□ 2.47
RAB40C-209ENST00000565511 UBE3BQ7Z3V4 1068 aa30.45■■■□□ 2.47
RAB40C-209ENST00000565511 ANKRD18AQ8IVF6 992 aa30.45■■■□□ 2.47
RAB40C-209ENST00000565511 TNS4Q8IZW8 715 aa30.45■■■□□ 2.47
RAB40C-209ENST00000565511 WDR33Q9C0J8 1336 aaKnown RBP30.45■■■□□ 2.46
RAB40C-209ENST00000565511 H7C1W4 665 aa30.44■■■□□ 2.46
RAB40C-209ENST00000565511 DPF2Q92785 391 aa30.44■■■□□ 2.46
RAB40C-209ENST00000565511 CASP7P55210 303 aa30.43■■■□□ 2.46
RAB40C-209ENST00000565511 TBC1D10BQ4KMP7 808 aaPredicted RBP30.43■■■□□ 2.46
RAB40C-209ENST00000565511 WBP1LQ9NX94 342 aa30.43■■■□□ 2.46
RAB40C-209ENST00000565511 H7C1D1 291 aa30.42■■■□□ 2.46
RAB40C-209ENST00000565511 GCKRQ14397 625 aa30.42■■■□□ 2.46
RAB40C-209ENST00000565511 CYP4F22Q6NT55 531 aa30.42■■■□□ 2.46
RAB40C-209ENST00000565511 FAM9BQ8IZU0 186 aa30.42■■■□□ 2.46
RAB40C-209ENST00000565511 ZC3H12CQ9C0D7 883 aaKnown RBP30.42■■■□□ 2.46
RAB40C-209ENST00000565511 TLL2Q9Y6L7 1015 aa30.42■■■□□ 2.46
RAB40C-209ENST00000565511 XDHP47989 1333 aa30.42■■■□□ 2.46
RAB40C-209ENST00000565511 CELF2O95319 508 aaKnown RBP30.41■■■□□ 2.46
RAB40C-209ENST00000565511 FKBP5Q13451 457 aaPredicted RBP30.41■■■□□ 2.46
RAB40C-209ENST00000565511 ZC3H15Q8WU90 426 aaKnown RBP30.41■■■□□ 2.46
RAB40C-209ENST00000565511 DNAAF4Q8WXU2 420 aa30.41■■■□□ 2.46
RAB40C-209ENST00000565511 VIL1P09327 827 aaKnown RBP30.4■■■□□ 2.46
RAB40C-209ENST00000565511 CAPNS2Q96L46 248 aa30.4■■■□□ 2.46
RAB40C-209ENST00000565511 CDC5LQ99459 802 aaKnown RBP30.39■■■□□ 2.46
RAB40C-209ENST00000565511 RPS12P25398 132 aaKnown RBP30.38■■■□□ 2.45
RAB40C-209ENST00000565511 USP48Q86UV5 1035 aa30.38■■■□□ 2.45
RAB40C-209ENST00000565511 MINPP1Q9UNW1 487 aa30.38■■■□□ 2.45
RAB40C-209ENST00000565511 ASTN2O75129 1339 aaPredicted RBP30.38■■■□□ 2.45
RAB40C-209ENST00000565511 A0A1B0GUL6 1792 aa30.37■■■□□ 2.45
RAB40C-209ENST00000565511 F6X3S4 739 aa30.37■■■□□ 2.45
RAB40C-209ENST00000565511 GRM1Q13255 1194 aa30.37■■■□□ 2.45
RAB40C-209ENST00000565511 FAM161AQ3B820 660 aa30.37■■■□□ 2.45
RAB40C-209ENST00000565511 RBM26Q5T8P6 1007 aaKnown RBP30.37■■■□□ 2.45
RAB40C-209ENST00000565511 PAXIP1Q6ZW49 1069 aaPredicted RBP30.37■■■□□ 2.45
RAB40C-209ENST00000565511 PLA2G12BQ9BX93 195 aa30.37■■■□□ 2.45
RAB40C-209ENST00000565511 ZNF408Q9H9D4 720 aa30.37■■■□□ 2.45
RAB40C-209ENST00000565511 BSDC1Q9NW68 430 aaPredicted RBP30.37■■■□□ 2.45
RAB40C-209ENST00000565511 CAPN15O75808 1086 aa30.36■■■□□ 2.45
RAB40C-209ENST00000565511 SAPCD2Q86UD0 394 aa30.36■■■□□ 2.45
RAB40C-209ENST00000565511 ZNF609O15014 1411 aa30.36■■■□□ 2.45
RAB40C-209ENST00000565511 ATP2B4P23634 1241 aa30.35■■■□□ 2.45
RAB40C-209ENST00000565511 CDC37L1Q7L3B6 337 aa30.35■■■□□ 2.45
RAB40C-209ENST00000565511 LINS1Q8NG48 757 aa30.35■■■□□ 2.45
RAB40C-209ENST00000565511 ADM5C9JUS6 153 aa30.34■■■□□ 2.45
RAB40C-209ENST00000565511 AOC2O75106 756 aa30.34■■■□□ 2.45
RAB40C-209ENST00000565511 AIDAQ96BJ3 306 aa30.34■■■□□ 2.45
RAB40C-209ENST00000565511 MED23Q9ULK4 1368 aa30.33■■■□□ 2.45
RAB40C-209ENST00000565511 HSPA8P11142 646 aaKnown RBP30.33■■■□□ 2.45
RAB40C-209ENST00000565511 CTCFP49711 727 aaPredicted RBP30.33■■■□□ 2.45
RAB40C-209ENST00000565511 KIF4BQ2VIQ3 1234 aa30.33■■■□□ 2.45
RAB40C-209ENST00000565511 RSBN1LQ6PCB5 846 aaPredicted RBP30.33■■■□□ 2.45
RAB40C-209ENST00000565511 G3V3G9 751 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 CSF1RP07333 972 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 ITGA6P23229 1130 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 KLRK1P26718 216 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 LBX1P52954 281 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 DCAF8Q5TAQ9 597 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 TXNRD3Q86VQ6 643 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 GMLQ99445 158 aa30.32■■■□□ 2.44
RAB40C-209ENST00000565511 ZNF521Q96K83 1311 aa30.31■■■□□ 2.44
RAB40C-209ENST00000565511 CCT4P50991 539 aaKnown RBP30.31■■■□□ 2.44
RAB40C-209ENST00000565511 BEND3Q5T5X7 828 aa30.31■■■□□ 2.44
RAB40C-209ENST00000565511 MYH16Q9H6N6 1097 aa30.31■■■□□ 2.44
RAB40C-209ENST00000565511 ZNF280AP59817 542 aaPredicted RBP30.3■■■□□ 2.44
RAB40C-209ENST00000565511 KRT26Q7Z3Y9 468 aa30.3■■■□□ 2.44
RAB40C-209ENST00000565511 MXD3Q9BW11 206 aa30.3■■■□□ 2.44
RAB40C-209ENST00000565511 PRDM10Q9NQV6 1147 aa30.3■■■□□ 2.44
RAB40C-209ENST00000565511 ECE1P42892 770 aa30.29■■■□□ 2.44
RAB40C-209ENST00000565511 GGA3Q9NZ52 723 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms