RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 DNAAF4Q8WXU2 420 aa25.41■■□□□ 1.66
CLN6-206ENST00000565471 DPF2Q92785 391 aa25.41■■□□□ 1.66
CLN6-206ENST00000565471 ZC3H12CQ9C0D7 883 aaKnown RBP25.41■■□□□ 1.66
CLN6-206ENST00000565471 SPINK5Q9NQ38 1064 aaPredicted RBP25.41■■□□□ 1.66
CLN6-206ENST00000565471 ANKIB1Q9P2G1 1089 aa25.41■■□□□ 1.66
CLN6-206ENST00000565471 GGA1Q9UJY5 639 aa25.41■■□□□ 1.66
CLN6-206ENST00000565471 UFL1O94874 794 aa25.4■■□□□ 1.66
CLN6-206ENST00000565471 GCKRQ14397 625 aa25.4■■□□□ 1.66
CLN6-206ENST00000565471 PGAP2Q9UHJ9 254 aa25.4■■□□□ 1.66
CLN6-206ENST00000565471 XDHP47989 1333 aa25.39■■□□□ 1.66
CLN6-206ENST00000565471 RASSF10A6NK89 507 aa25.39■■□□□ 1.66
CLN6-206ENST00000565471 PSMD14O00487 310 aa25.39■■□□□ 1.66
CLN6-206ENST00000565471 UBE3BQ7Z3V4 1068 aa25.39■■□□□ 1.66
CLN6-206ENST00000565471 LINS1Q8NG48 757 aa25.39■■□□□ 1.66
CLN6-206ENST00000565471 ZC3H15Q8WU90 426 aaKnown RBP25.39■■□□□ 1.66
CLN6-206ENST00000565471 PLA2G12BQ9BX93 195 aa25.39■■□□□ 1.66
CLN6-206ENST00000565471 CNOT7Q9UIV1 285 aaKnown RBP25.39■■□□□ 1.66
CLN6-206ENST00000565471 H7C1D1 291 aa25.38■■□□□ 1.65
CLN6-206ENST00000565471 RPS12P25398 132 aaKnown RBP25.38■■□□□ 1.65
CLN6-206ENST00000565471 DOK7Q18PE1 504 aa25.38■■□□□ 1.65
CLN6-206ENST00000565471 GPR101Q96P66 508 aaPredicted RBP25.38■■□□□ 1.65
CLN6-206ENST00000565471 GREM2Q9H772 168 aa25.38■■□□□ 1.65
CLN6-206ENST00000565471 TRPM7Q96QT4 1865 aa25.37■■□□□ 1.65
CLN6-206ENST00000565471 MICALL2Q8IY33 904 aa25.37■■□□□ 1.65
CLN6-206ENST00000565471 ZBTB12Q9Y330 459 aaPredicted RBP25.37■■□□□ 1.65
CLN6-206ENST00000565471 ATP2B4P23634 1241 aa25.36■■□□□ 1.65
CLN6-206ENST00000565471 VEGFBP49765 207 aa25.36■■□□□ 1.65
CLN6-206ENST00000565471 HIRAP54198 1017 aaPredicted RBP25.36■■□□□ 1.65
CLN6-206ENST00000565471 CASP7P55210 303 aa25.36■■□□□ 1.65
CLN6-206ENST00000565471 BSDC1Q9NW68 430 aaPredicted RBP25.36■■□□□ 1.65
CLN6-206ENST00000565471 DEFB115Q30KQ5 88 aa25.35■■□□□ 1.65
CLN6-206ENST00000565471 TRPM4Q8TD43 1214 aa25.35■■□□□ 1.65
CLN6-206ENST00000565471 ZNF521Q96K83 1311 aa25.35■■□□□ 1.65
CLN6-206ENST00000565471 SCN9AQ15858 1988 aa25.35■■□□□ 1.65
CLN6-206ENST00000565471 SHTN1A0MZ66 631 aa25.34■■□□□ 1.65
CLN6-206ENST00000565471 TRAF5O00463 557 aa25.34■■□□□ 1.65
CLN6-206ENST00000565471 FMR1Q06787 632 aaKnown RBP eCLIP25.34■■□□□ 1.65
CLN6-206ENST00000565471 KCNQ5Q9NR82 932 aa25.34■■□□□ 1.65
CLN6-206ENST00000565471 ABT1Q9ULW3 272 aaKnown RBP25.34■■□□□ 1.65
CLN6-206ENST00000565471 G3V3G9 751 aa25.33■■□□□ 1.65
CLN6-206ENST00000565471 ZNF609O15014 1411 aa25.33■■□□□ 1.65
CLN6-206ENST00000565471 DCAF8Q5TAQ9 597 aa25.33■■□□□ 1.65
CLN6-206ENST00000565471 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
CLN6-206ENST00000565471 SPEF2Q9C093 1822 aa25.33■■□□□ 1.64
CLN6-206ENST00000565471 VIL1P09327 827 aaKnown RBP25.32■■□□□ 1.64
CLN6-206ENST00000565471 COL13A1Q5TAT6 717 aaPredicted RBP25.32■■□□□ 1.64
CLN6-206ENST00000565471 CST9Q5W186 159 aa25.32■■□□□ 1.64
CLN6-206ENST00000565471 PSME4Q14997 1843 aa25.31■■□□□ 1.64
CLN6-206ENST00000565471 CSF1RP07333 972 aa25.31■■□□□ 1.64
CLN6-206ENST00000565471 CDC37L1Q7L3B6 337 aa25.31■■□□□ 1.64
CLN6-206ENST00000565471 GLIS2Q9BZE0 524 aaPredicted RBP25.31■■□□□ 1.64
CLN6-206ENST00000565471 MED23Q9ULK4 1368 aa25.31■■□□□ 1.64
CLN6-206ENST00000565471 PCNTO95613 3336 aa25.3■■□□□ 1.64
CLN6-206ENST00000565471 IGHMBP2P38935 993 aaKnown RBP25.3■■□□□ 1.64
CLN6-206ENST00000565471 BEND3Q5T5X7 828 aa25.3■■□□□ 1.64
CLN6-206ENST00000565471 SAMD7Q7Z3H4 446 aa25.3■■□□□ 1.64
CLN6-206ENST00000565471 F6X3S4 739 aa25.29■■□□□ 1.64
CLN6-206ENST00000565471 ITGA6P23229 1130 aa25.29■■□□□ 1.64
CLN6-206ENST00000565471 FAM161AQ3B820 660 aa25.29■■□□□ 1.64
CLN6-206ENST00000565471 PODNQ7Z5L7 613 aa25.29■■□□□ 1.64
CLN6-206ENST00000565471 TLL2Q9Y6L7 1015 aa25.29■■□□□ 1.64
CLN6-206ENST00000565471 WDR33Q9C0J8 1336 aaKnown RBP25.29■■□□□ 1.64
CLN6-206ENST00000565471 CCT4P50991 539 aaKnown RBP25.28■■□□□ 1.64
CLN6-206ENST00000565471 AGBL3Q8NEM8 1001 aa25.28■■□□□ 1.64
CLN6-206ENST00000565471 CELF2O95319 508 aaKnown RBP25.27■■□□□ 1.64
CLN6-206ENST00000565471 TBC1D10BQ4KMP7 808 aaPredicted RBP25.27■■□□□ 1.64
CLN6-206ENST00000565471 THSD7BQ9C0I4 1608 aa25.26■■□□□ 1.63
CLN6-206ENST00000565471 EGFRP00533 1210 aa25.26■■□□□ 1.63
CLN6-206ENST00000565471 ECE1P42892 770 aa25.26■■□□□ 1.63
CLN6-206ENST00000565471 RSBN1LQ6PCB5 846 aaPredicted RBP25.26■■□□□ 1.63
CLN6-206ENST00000565471 MPHOSPH8Q99549 860 aa25.26■■□□□ 1.63
CLN6-206ENST00000565471 LEMD3Q9Y2U8 911 aa25.26■■□□□ 1.63
CLN6-206ENST00000565471 KIF4BQ2VIQ3 1234 aa25.25■■□□□ 1.63
CLN6-206ENST00000565471 ANKRD2Q9GZV1 360 aa25.25■■□□□ 1.63
CLN6-206ENST00000565471 WBP1LQ9NX94 342 aa25.25■■□□□ 1.63
CLN6-206ENST00000565471 ANKRD18BA2A2Z9 1011 aa25.24■■□□□ 1.63
CLN6-206ENST00000565471 USP17L3A6NCW0 530 aa25.24■■□□□ 1.63
CLN6-206ENST00000565471 USP17L4A6NCW7 530 aa25.24■■□□□ 1.63
CLN6-206ENST00000565471 WTIPA6NIX2 430 aaPredicted RBP25.24■■□□□ 1.63
CLN6-206ENST00000565471 FOXN1O15353 648 aa25.24■■□□□ 1.63
CLN6-206ENST00000565471 ZNF280AP59817 542 aaPredicted RBP25.24■■□□□ 1.63
CLN6-206ENST00000565471 USP17L1Q7RTZ2 530 aa25.24■■□□□ 1.63
CLN6-206ENST00000565471 AIDAQ96BJ3 306 aa25.24■■□□□ 1.63
CLN6-206ENST00000565471 CAPNS2Q96L46 248 aa25.24■■□□□ 1.63
CLN6-206ENST00000565471 ALDH1L1O75891 902 aa25.23■■□□□ 1.63
CLN6-206ENST00000565471 FOXO4P98177 505 aa25.23■■□□□ 1.63
CLN6-206ENST00000565471 RBM26Q5T8P6 1007 aaKnown RBP25.23■■□□□ 1.63
CLN6-206ENST00000565471 SAPCD2Q86UD0 394 aa25.23■■□□□ 1.63
CLN6-206ENST00000565471 USP48Q86UV5 1035 aa25.23■■□□□ 1.63
CLN6-206ENST00000565471 HHIPL1Q96JK4 782 aa25.23■■□□□ 1.63
CLN6-206ENST00000565471 GMLQ99445 158 aa25.23■■□□□ 1.63
CLN6-206ENST00000565471 GRM8O00222 908 aa25.22■■□□□ 1.63
CLN6-206ENST00000565471 MAP2K1Q02750 393 aaPredicted RBP25.22■■□□□ 1.63
CLN6-206ENST00000565471 PAXIP1Q6ZW49 1069 aaPredicted RBP25.22■■□□□ 1.63
CLN6-206ENST00000565471 DCPSQ96C86 337 aaKnown RBP25.22■■□□□ 1.63
CLN6-206ENST00000565471 COA1Q9GZY4 146 aa25.22■■□□□ 1.63
CLN6-206ENST00000565471 ZNF804BA4D1E1 1349 aa25.21■■□□□ 1.63
CLN6-206ENST00000565471 E9PSI1 815 aa25.21■■□□□ 1.63
CLN6-206ENST00000565471 IFIT5Q13325 482 aaKnown RBP25.21■■□□□ 1.63
CLN6-206ENST00000565471 KRT26Q7Z3Y9 468 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms