RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 KLRK1P26718 216 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 ANKRD18AQ8IVF6 992 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 C19orf44Q9H6X5 657 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 VPS37CA5D8V6 355 aaPredicted RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 BEND3Q5T5X7 828 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 PYM1Q9BRP8 204 aaKnown RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 TOMM22Q9NS69 142 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 RHPN1Q8TCX5 695 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 SENP2Q9HC62 589 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 ADCY9O60503 1353 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 CYP2D7A0A087X1C5 515 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 CYP2E1P05181 493 aaPredicted RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 ZCRB1Q8TBF4 217 aaKnown RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 RUFY2Q8WXA3 655 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 MXD3Q9BW11 206 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 DNAJC5Q9H3Z4 198 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 TFCP2L1Q9NZI6 479 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 SLIT2O94813 1529 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 PIGBQ92521 554 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 ERCC3P19447 782 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 NEXNQ0ZGT2 675 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 ANKRD13DQ6ZTN6 518 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 KIAA1211Q6ZU35 1233 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 F8W031 263 aaPredicted RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 TATP17735 454 aaPredicted RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 RBM25P49756 843 aaKnown RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 CCDC173Q0VFZ6 552 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 UBE2Q2Q8WVN8 375 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 NMIQ13287 307 aaPredicted RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 RNF20Q5VTR2 975 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 SLC52A2Q9HAB3 445 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 ATP2B1P20020 1258 aa3.96□□□□□ -1.77
CHD9-213ENST00000564845 IQCEQ6IPM2 695 aa3.96□□□□□ -1.77
CHD9-213ENST00000564845 NDC80O14777 642 aa3.96□□□□□ -1.77
CHD9-213ENST00000564845 ST18O60284 1047 aa3.96□□□□□ -1.77
CHD9-213ENST00000564845 TRAK2O60296 914 aa3.96□□□□□ -1.77
CHD9-213ENST00000564845 ANKRD44Q8N8A2 993 aa3.96□□□□□ -1.77
CHD9-213ENST00000564845 COL4A1P02462 1669 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 JAK2O60674 1132 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 IFIT2P09913 472 aaKnown RBP3.96□□□□□ -1.78
CHD9-213ENST00000564845 TMX1Q9H3N1 280 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 DCTPP1Q9H773 170 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 CNPY2Q9Y2B0 182 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 IL16Q14005 1332 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 SYCE3A1L190 88 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 DHX16O60231 1041 aaKnown RBP3.96□□□□□ -1.78
CHD9-213ENST00000564845 ATP6V1AP38606 617 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 HOMEZQ8IX15 550 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 EEF2KMTQ96G04 330 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 GREM2Q9H772 168 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 KDM3BQ7LBC6 1761 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 FIBPO43427 364 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 NF2P35240 595 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 JAKMIP1Q96N16 626 aaKnown RBP3.96□□□□□ -1.78
CHD9-213ENST00000564845 FSD1Q9BTV5 496 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 ABCF2Q9UG63 623 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 DDX49Q9Y6V7 483 aaKnown RBP3.96□□□□□ -1.78
CHD9-213ENST00000564845 NPHP4O75161 1426 aaPredicted RBP3.96□□□□□ -1.78
CHD9-213ENST00000564845 APPP05067 770 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 KIF20AO95235 890 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 WASHC4Q2M389 1173 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 PLEKHO1Q53GL0 409 aaPredicted RBP3.96□□□□□ -1.78
CHD9-213ENST00000564845 AIFM3Q96NN9 605 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 USP26Q9BXU7 913 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 BRMS1Q9HCU9 246 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 PRDM1O75626 825 aa3.96□□□□□ -1.78
CHD9-213ENST00000564845 DDX58O95786 925 aaKnown RBP3.96□□□□□ -1.78
CHD9-213ENST00000564845 IDH1O75874 414 aaKnown RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 AK2P54819 239 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 CPVLQ9H3G5 476 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 HAUS2Q9NVX0 235 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 POLR3DP05423 398 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 CLEC17AQ6ZS10 378 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 SPC24Q8NBT2 197 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 TMX3Q96JJ7 454 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 SHANK3Q9BYB0 1731 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 GTF2F1P35269 517 aaKnown RBP eCLIP3.95□□□□□ -1.78
CHD9-213ENST00000564845 ZNHIT6Q9NWK9 470 aaKnown RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 KIF4AO95239 1232 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 TAL1P17542 331 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 TAF7LQ5H9L4 462 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 AKAP4Q5JQC9 854 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 NGLY1Q96IV0 654 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 RRAGDQ9NQL2 400 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 FZD1Q9UP38 647 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 UBAP1LF5GYI3 381 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 PRKAB2O43741 272 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 CHMLP26374 656 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 SH3BGRP55822 239 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 HDAC1Q13547 482 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 SDR42E1Q8WUS8 393 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 MAP7D2Q96T17 732 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 TMOD3Q9NYL9 352 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 GORABQ5T7V8 394 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 CKAP2LQ8IYA6 745 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 COL15A1P39059 1388 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 GRM8O00222 908 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 DBNLQ9UJU6 430 aaKnown RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 PNMA2Q9UL42 364 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms