RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 IFIT1P09914 478 aaKnown RBP30.44■■■□□ 2.46
LINC01003-201ENST00000564834 TBC1D9BQ66K14 1250 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 SMIM5Q71RC9 77 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 KBTBD3Q8NAB2 608 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 IL27Q8NEV9 243 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 PAG1Q9NWQ8 432 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 NDUFB9Q9Y6M9 179 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 MROH5Q6ZUA9 1318 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 MED23Q9ULK4 1368 aa30.44■■■□□ 2.46
LINC01003-201ENST00000564834 NBR1Q14596 966 aa30.43■■■□□ 2.46
LINC01003-201ENST00000564834 GORABQ5T7V8 394 aa30.43■■■□□ 2.46
LINC01003-201ENST00000564834 ARAP2Q8WZ64 1704 aa30.43■■■□□ 2.46
LINC01003-201ENST00000564834 SRP68Q9UHB9 627 aaKnown RBP30.43■■■□□ 2.46
LINC01003-201ENST00000564834 CCDC171Q6TFL3 1326 aa30.43■■■□□ 2.46
LINC01003-201ENST00000564834 PDE8BO95263 885 aa30.42■■■□□ 2.46
LINC01003-201ENST00000564834 ADORA1P30542 326 aa30.42■■■□□ 2.46
LINC01003-201ENST00000564834 RBM6P78332 1123 aaKnown RBP30.42■■■□□ 2.46
LINC01003-201ENST00000564834 DDX46Q7L014 1031 aaKnown RBP30.42■■■□□ 2.46
LINC01003-201ENST00000564834 ARHGEF1Q92888 912 aaKnown RBP30.42■■■□□ 2.46
LINC01003-201ENST00000564834 UBR3Q6ZT12 1888 aa30.42■■■□□ 2.46
LINC01003-201ENST00000564834 TTC39AQ5SRH9 613 aa30.41■■■□□ 2.46
LINC01003-201ENST00000564834 LRRC4BQ9NT99 713 aa30.41■■■□□ 2.46
LINC01003-201ENST00000564834 PTH1RQ03431 593 aa30.41■■■□□ 2.46
LINC01003-201ENST00000564834 ERFEQ4G0M1 354 aa30.41■■■□□ 2.46
LINC01003-201ENST00000564834 AMIGO3Q86WK7 504 aa30.41■■■□□ 2.46
LINC01003-201ENST00000564834 NYXQ9GZU5 481 aa30.41■■■□□ 2.46
LINC01003-201ENST00000564834 GOLIM4O00461 696 aa30.4■■■□□ 2.46
LINC01003-201ENST00000564834 SLC27A3Q5K4L6 730 aa30.4■■■□□ 2.46
LINC01003-201ENST00000564834 BICDL1Q6ZP65 573 aa30.4■■■□□ 2.46
LINC01003-201ENST00000564834 SETDB2Q96T68 719 aa30.4■■■□□ 2.46
LINC01003-201ENST00000564834 MPHOSPH8Q99549 860 aa30.4■■■□□ 2.46
LINC01003-201ENST00000564834 SEC31BQ9NQW1 1179 aa30.4■■■□□ 2.46
LINC01003-201ENST00000564834 NEK4P51957 841 aa30.39■■■□□ 2.46
LINC01003-201ENST00000564834 AKAP11Q9UKA4 1901 aa30.39■■■□□ 2.46
LINC01003-201ENST00000564834 TRAPPC3LQ5T215 181 aa30.38■■■□□ 2.45
LINC01003-201ENST00000564834 HSP90AA1P07900 732 aaKnown RBP30.38■■■□□ 2.45
LINC01003-201ENST00000564834 ADRA2BP18089 450 aa30.38■■■□□ 2.45
LINC01003-201ENST00000564834 IGHMBP2P38935 993 aaKnown RBP30.38■■■□□ 2.45
LINC01003-201ENST00000564834 SF3B3Q15393 1217 aaKnown RBP30.38■■■□□ 2.45
LINC01003-201ENST00000564834 SLC10A5Q5PT55 438 aa30.38■■■□□ 2.45
LINC01003-201ENST00000564834 CHMP5Q9NZZ3 219 aa30.38■■■□□ 2.45
LINC01003-201ENST00000564834 SNX14Q9Y5W7 946 aa30.38■■■□□ 2.45
LINC01003-201ENST00000564834 DDIT3P35638 169 aa30.37■■■□□ 2.45
LINC01003-201ENST00000564834 MCM2P49736 904 aa30.37■■■□□ 2.45
LINC01003-201ENST00000564834 PUM3Q15397 648 aaKnown RBP30.37■■■□□ 2.45
LINC01003-201ENST00000564834 MAP4K1Q92918 833 aa30.37■■■□□ 2.45
LINC01003-201ENST00000564834 TRIM37O94972 964 aa30.36■■■□□ 2.45
LINC01003-201ENST00000564834 RFC4P35249 363 aa30.36■■■□□ 2.45
LINC01003-201ENST00000564834 ZNF512BQ96KM6 892 aaPredicted RBP30.36■■■□□ 2.45
LINC01003-201ENST00000564834 MYH7P12883 1935 aa30.36■■■□□ 2.45
LINC01003-201ENST00000564834 GTF2E1P29083 439 aaPredicted RBP30.36■■■□□ 2.45
LINC01003-201ENST00000564834 KCNB2Q92953 911 aa30.36■■■□□ 2.45
LINC01003-201ENST00000564834 CDC5LQ99459 802 aaKnown RBP30.36■■■□□ 2.45
LINC01003-201ENST00000564834 FGFR2P21802 821 aa30.35■■■□□ 2.45
LINC01003-201ENST00000564834 ZNF589Q86UQ0 364 aaPredicted RBP30.35■■■□□ 2.45
LINC01003-201ENST00000564834 LPIN2Q92539 896 aa30.35■■■□□ 2.45
LINC01003-201ENST00000564834 NECTIN1Q15223 517 aa30.34■■■□□ 2.45
LINC01003-201ENST00000564834 NFKBIBQ15653 356 aa30.34■■■□□ 2.45
LINC01003-201ENST00000564834 PHF14O94880 888 aa30.33■■■□□ 2.45
LINC01003-201ENST00000564834 NBPF5PQ86XG9 351 aaPredicted RBP30.33■■■□□ 2.45
LINC01003-201ENST00000564834 RASEFQ8IZ41 740 aa30.33■■■□□ 2.45
LINC01003-201ENST00000564834 RBM8AQ9Y5S9 174 aaKnown RBP30.33■■■□□ 2.45
LINC01003-201ENST00000564834 MCMDC2Q4G0Z9 681 aa30.33■■■□□ 2.45
LINC01003-201ENST00000564834 CIZ1Q9ULV3 898 aaPredicted RBP30.33■■■□□ 2.45
LINC01003-201ENST00000564834 A0A1B0GUL6 1792 aa30.32■■■□□ 2.44
LINC01003-201ENST00000564834 FKBP4Q02790 459 aaKnown RBP eCLIP30.32■■■□□ 2.44
LINC01003-201ENST00000564834 LRRFIP1Q32MZ4 808 aaKnown RBP30.32■■■□□ 2.44
LINC01003-201ENST00000564834 PRPF40BQ6NWY9 871 aaKnown RBP30.32■■■□□ 2.44
LINC01003-201ENST00000564834 TPTE2Q6XPS3 522 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 ILDR1Q86SU0 546 aaPredicted RBP30.31■■■□□ 2.44
LINC01003-201ENST00000564834 HELLSQ9NRZ9 838 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 TAF1P21675 1872 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 TAF5LO75529 589 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 SLC5A1P13866 664 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 HMGB2P26583 209 aaKnown RBP30.31■■■□□ 2.44
LINC01003-201ENST00000564834 KCNJ4P48050 445 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 SCARF1Q14162 830 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 C3orf67Q6ZVT6 689 aa30.31■■■□□ 2.44
LINC01003-201ENST00000564834 UPF3BQ9BZI7 483 aaKnown RBP30.31■■■□□ 2.44
LINC01003-201ENST00000564834 COL4A1P02462 1669 aa30.3■■■□□ 2.44
LINC01003-201ENST00000564834 HELBQ8NG08 1087 aaPredicted RBP30.3■■■□□ 2.44
LINC01003-201ENST00000564834 ZKSCAN1P17029 563 aaPredicted RBP30.29■■■□□ 2.44
LINC01003-201ENST00000564834 ZMYM1Q5SVZ6 1142 aa30.29■■■□□ 2.44
LINC01003-201ENST00000564834 CARMIL3Q8ND23 1372 aa30.29■■■□□ 2.44
LINC01003-201ENST00000564834 CHGBP05060 677 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 SSFA2P28290 1259 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 ARID4AP29374 1257 aaPredicted RBP30.28■■■□□ 2.44
LINC01003-201ENST00000564834 MCAMP43121 646 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 ZAP70P43403 619 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 CREB3L3Q68CJ9 461 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 ANKRD18AQ8IVF6 992 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.28■■■□□ 2.44
LINC01003-201ENST00000564834 RNF113AO15541 343 aaKnown RBP30.28■■■□□ 2.44
LINC01003-201ENST00000564834 UQCRFS1P1P0C7P4 283 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 RNF20Q5VTR2 975 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 CCDC102BQ68D86 513 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 NLRP3Q96P20 1036 aa30.28■■■□□ 2.44
LINC01003-201ENST00000564834 SEC62Q99442 399 aaKnown RBP30.27■■■□□ 2.44
LINC01003-201ENST00000564834 TM6SF1Q9BZW5 370 aa30.27■■■□□ 2.44
LINC01003-201ENST00000564834 ZFYP08048 801 aaPredicted RBP30.26■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms