RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SCRN1Q12765 414 aa18.28■□□□□ 0.52
GTF3C1-205ENST00000564747 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
GTF3C1-205ENST00000564747 STOX1Q6ZVD7 989 aa18.28■□□□□ 0.52
GTF3C1-205ENST00000564747 CSB-PGBD3P0DP91 1061 aa18.28■□□□□ 0.52
GTF3C1-205ENST00000564747 CASP7P55210 303 aa18.28■□□□□ 0.52
GTF3C1-205ENST00000564747 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
GTF3C1-205ENST00000564747 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
GTF3C1-205ENST00000564747 GOLGA6L6A8MZA4 724 aa18.27■□□□□ 0.52
GTF3C1-205ENST00000564747 PTGS1P23219 599 aa18.27■□□□□ 0.52
GTF3C1-205ENST00000564747 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.52
GTF3C1-205ENST00000564747 DNAJC5Q9H3Z4 198 aa18.27■□□□□ 0.52
GTF3C1-205ENST00000564747 FAM177BA6PVY3 158 aa18.27■□□□□ 0.51
GTF3C1-205ENST00000564747 TPM3P06753 285 aa18.27■□□□□ 0.51
GTF3C1-205ENST00000564747 FGD1P98174 961 aa18.27■□□□□ 0.51
GTF3C1-205ENST00000564747 CEBPZQ03701 1054 aaKnown RBP18.27■□□□□ 0.51
GTF3C1-205ENST00000564747 NEUROD6Q96NK8 337 aa18.27■□□□□ 0.51
GTF3C1-205ENST00000564747 KBTBD3Q8NAB2 608 aa18.26■□□□□ 0.51
GTF3C1-205ENST00000564747 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
GTF3C1-205ENST00000564747 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
GTF3C1-205ENST00000564747 FOSBP53539 338 aa18.26■□□□□ 0.51
GTF3C1-205ENST00000564747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.26■□□□□ 0.51
GTF3C1-205ENST00000564747 GOLIM4O00461 696 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 TIMM10P62072 90 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 CHRNA2Q15822 529 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 C1orf167Q5SNV9 1468 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 DNAJC25Q9H1X3 360 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 A0A0G2JLW4 131 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 GTF2F1P35269 517 aaKnown RBP eCLIP18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
GTF3C1-205ENST00000564747 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 PPFIA3O75145 1194 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 CABP4P57796 275 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 FOXO4P98177 505 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 ATG9AQ7Z3C6 839 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 CCDC186Q7Z3E2 898 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 ZNF710Q8N1W2 664 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 SMARCC2Q8TAQ2 1214 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 ZSCAN16Q9H4T2 348 aaPredicted RBP18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 RFX7Q2KHR2 1363 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 ZNF165P49910 485 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 APOBRQ0VD83 1088 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 DHX32Q7L7V1 743 aaKnown RBP18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 TRIM5Q9C035 493 aa18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 FTOQ9C0B1 505 aaKnown RBP eCLIP18.24■□□□□ 0.51
GTF3C1-205ENST00000564747 PFKFB2O60825 505 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 ADD1P35611 737 aaKnown RBP18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 DRC7Q8IY82 874 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 NSUN7Q8NE18 718 aaKnown RBP18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 CFAP45Q9UL16 551 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 CCT2P78371 535 aaKnown RBP18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 LRMPQ12912 555 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 SMAP1Q8IYB5 467 aaPredicted RBP18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
GTF3C1-205ENST00000564747 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 TDRD7Q8NHU6 1098 aaKnown RBP18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 PRDM4Q9UKN5 801 aa18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 KIF3AQ9Y496 699 aa18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 ZNF75DP51815 510 aa18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 PLA2G4DQ86XP0 818 aa18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 CCDC94Q9BW85 323 aaPredicted RBP18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 NCOA5Q9HCD5 579 aaKnown RBP18.22■□□□□ 0.51
GTF3C1-205ENST00000564747 H7C1W4 665 aa18.21■□□□□ 0.51
GTF3C1-205ENST00000564747 TTLL7Q6ZT98 887 aa18.21■□□□□ 0.51
GTF3C1-205ENST00000564747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.21■□□□□ 0.51
GTF3C1-205ENST00000564747 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
GTF3C1-205ENST00000564747 CHST3Q7LGC8 479 aa18.21■□□□□ 0.51
GTF3C1-205ENST00000564747 LLPHQ9BRT6 129 aaKnown RBP18.21■□□□□ 0.51
GTF3C1-205ENST00000564747 ARFGEF2Q9Y6D5 1785 aa18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 PTPDC1A2A3K4 754 aa18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 ZNF594Q96JF6 807 aaPredicted RBP18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 HELLSQ9NRZ9 838 aa18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 NAP1L2Q9ULW6 460 aaPredicted RBP18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 HSPD1P10809 573 aaKnown RBP18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 LRRC24Q50LG9 513 aa18.2■□□□□ 0.5
GTF3C1-205ENST00000564747 E7EWF7 191 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 RIOK3O14730 519 aaKnown RBP18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 ZMYM1Q5SVZ6 1142 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 CCAR1Q8IX12 1150 aaKnown RBP18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 RCOR1Q9UKL0 485 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 MST1RQ04912 1400 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 ALS2Q96Q42 1657 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 NAA16Q6N069 864 aaPredicted RBP18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 USP28Q96RU2 1077 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 GOLPH3LQ9H4A5 285 aa18.19■□□□□ 0.5
GTF3C1-205ENST00000564747 AGXT2Q9BYV1 514 aa18.18■□□□□ 0.5
GTF3C1-205ENST00000564747 BCL2L12Q9HB09 334 aa18.18■□□□□ 0.5
GTF3C1-205ENST00000564747 CWC25Q9NXE8 425 aaPredicted RBP18.18■□□□□ 0.5
GTF3C1-205ENST00000564747 LAMA4Q16363 1823 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms