RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 ADCY5O95622 1261 aa18.09■□□□□ 0.49
HERC2-207ENST00000564734 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
HERC2-207ENST00000564734 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
HERC2-207ENST00000564734 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
HERC2-207ENST00000564734 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
HERC2-207ENST00000564734 STK3Q13188 491 aa18.09■□□□□ 0.49
HERC2-207ENST00000564734 WDR17Q8IZU2 1322 aa18.09■□□□□ 0.49
HERC2-207ENST00000564734 Q6ZUG5 572 aa18.09■□□□□ 0.49
HERC2-207ENST00000564734 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
HERC2-207ENST00000564734 HSPA1LP34931 641 aa18.08■□□□□ 0.49
HERC2-207ENST00000564734 STOX1Q6ZVD7 989 aa18.08■□□□□ 0.49
HERC2-207ENST00000564734 HELLSQ9NRZ9 838 aa18.08■□□□□ 0.49
HERC2-207ENST00000564734 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
HERC2-207ENST00000564734 JAK2O60674 1132 aa18.07■□□□□ 0.48
HERC2-207ENST00000564734 LIG1P18858 919 aa18.07■□□□□ 0.48
HERC2-207ENST00000564734 A1BGP04217 495 aa18.07■□□□□ 0.48
HERC2-207ENST00000564734 PTMAP06454 111 aaKnown RBP18.07■□□□□ 0.48
HERC2-207ENST00000564734 IL15P40933 162 aaPredicted RBP18.07■□□□□ 0.48
HERC2-207ENST00000564734 SCAND2PQ9GZW5 306 aaPredicted RBP18.07■□□□□ 0.48
HERC2-207ENST00000564734 TNS2Q63HR2 1409 aa18.07■□□□□ 0.48
HERC2-207ENST00000564734 AP5Z1O43299 807 aa18.07■□□□□ 0.48
HERC2-207ENST00000564734 CCDC191Q8NCU4 936 aa18.07■□□□□ 0.48
HERC2-207ENST00000564734 PAG1Q9NWQ8 432 aa18.07■□□□□ 0.48
HERC2-207ENST00000564734 ZMYM1Q5SVZ6 1142 aa18.06■□□□□ 0.48
HERC2-207ENST00000564734 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
HERC2-207ENST00000564734 DSCC1Q9BVC3 393 aa18.06■□□□□ 0.48
HERC2-207ENST00000564734 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
HERC2-207ENST00000564734 TIMM10P62072 90 aa18.06■□□□□ 0.48
HERC2-207ENST00000564734 RESTQ13127 1097 aa18.06■□□□□ 0.48
HERC2-207ENST00000564734 LEO1Q8WVC0 666 aaPredicted RBP18.06■□□□□ 0.48
HERC2-207ENST00000564734 R3HCC1Q9Y3T6 440 aaKnown RBP18.06■□□□□ 0.48
HERC2-207ENST00000564734 EYA2O00167 538 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 CIAO1O76071 339 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 SLFNL1Q499Z3 407 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 LRRC24Q50LG9 513 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 CHMP3Q9Y3E7 222 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 GOLIM4O00461 696 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 AGXT2Q9BYV1 514 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 EXOSC10Q01780 885 aaKnown RBP18.05■□□□□ 0.48
HERC2-207ENST00000564734 SCRN1Q12765 414 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
HERC2-207ENST00000564734 TFIP11Q9UBB9 837 aaKnown RBP18.05■□□□□ 0.48
HERC2-207ENST00000564734 COL5A2P05997 1499 aaPredicted RBP18.04■□□□□ 0.48
HERC2-207ENST00000564734 RRP9O43818 475 aaKnown RBP18.04■□□□□ 0.48
HERC2-207ENST00000564734 PFKFB2O60825 505 aa18.04■□□□□ 0.48
HERC2-207ENST00000564734 HMGB1P09429 215 aaKnown RBP18.04■□□□□ 0.48
HERC2-207ENST00000564734 CCDC192P0DO97 292 aa18.04■□□□□ 0.48
HERC2-207ENST00000564734 RBM43Q6ZSC3 357 aaKnown RBP18.04■□□□□ 0.48
HERC2-207ENST00000564734 KIAA2012Q0VF49 1180 aa18.04■□□□□ 0.48
HERC2-207ENST00000564734 DHX32Q7L7V1 743 aaKnown RBP18.04■□□□□ 0.48
HERC2-207ENST00000564734 BRF1Q92994 677 aa18.04■□□□□ 0.48
HERC2-207ENST00000564734 SPATA32Q96LK8 384 aa18.04■□□□□ 0.48
HERC2-207ENST00000564734 LLPHQ9BRT6 129 aaKnown RBP18.04■□□□□ 0.48
HERC2-207ENST00000564734 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.03■□□□□ 0.48
HERC2-207ENST00000564734 ZNF594Q96JF6 807 aaPredicted RBP18.03■□□□□ 0.48
HERC2-207ENST00000564734 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 TOM1L2Q6ZVM7 507 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 PGBD1Q96JS3 809 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 CCDC9Q9Y3X0 531 aaKnown RBP18.03■□□□□ 0.48
HERC2-207ENST00000564734 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 LAMA4Q16363 1823 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 MAP3K11Q16584 847 aa18.03■□□□□ 0.48
HERC2-207ENST00000564734 SPEF2Q9C093 1822 aa18.02■□□□□ 0.48
HERC2-207ENST00000564734 CTDNEP1O95476 244 aa18.02■□□□□ 0.47
HERC2-207ENST00000564734 PIBF1Q8WXW3 757 aa18.02■□□□□ 0.47
HERC2-207ENST00000564734 ZNF830Q96NB3 372 aaPredicted RBP18.02■□□□□ 0.47
HERC2-207ENST00000564734 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.47
HERC2-207ENST00000564734 PUS3Q9BZE2 481 aaKnown RBP18.02■□□□□ 0.47
HERC2-207ENST00000564734 A0A1B0GUL7 405 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 HSPD1P10809 573 aaKnown RBP18.01■□□□□ 0.47
HERC2-207ENST00000564734 EVA1CP58658 441 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 DACT1Q9NYF0 836 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 A0A0G2JLW4 131 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 RNF113AO15541 343 aaKnown RBP18.01■□□□□ 0.47
HERC2-207ENST00000564734 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
HERC2-207ENST00000564734 MEX3CQ5U5Q3 659 aaKnown RBP18.01■□□□□ 0.47
HERC2-207ENST00000564734 NSUN7Q8NE18 718 aaKnown RBP18.01■□□□□ 0.47
HERC2-207ENST00000564734 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 ZSCAN16Q9H4T2 348 aaPredicted RBP18.01■□□□□ 0.47
HERC2-207ENST00000564734 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
HERC2-207ENST00000564734 MAST3O60307 1309 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 TYRO3Q06418 890 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 CLSTN2Q9H4D0 955 aa18.01■□□□□ 0.47
HERC2-207ENST00000564734 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
HERC2-207ENST00000564734 IL2RBP14784 551 aa18■□□□□ 0.47
HERC2-207ENST00000564734 ADD1P35611 737 aaKnown RBP18■□□□□ 0.47
HERC2-207ENST00000564734 CAMK4Q16566 473 aa18■□□□□ 0.47
HERC2-207ENST00000564734 MPNDQ8N594 471 aa18■□□□□ 0.47
HERC2-207ENST00000564734 FAM200AQ8TCP9 573 aa18■□□□□ 0.47
HERC2-207ENST00000564734 C8orf37Q96NL8 207 aa18■□□□□ 0.47
HERC2-207ENST00000564734 HSP90AA2PQ14568 343 aaPredicted RBP18■□□□□ 0.47
HERC2-207ENST00000564734 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
HERC2-207ENST00000564734 E7EWF7 191 aa17.99■□□□□ 0.47
HERC2-207ENST00000564734 DDX11Q96FC9 970 aa17.99■□□□□ 0.47
HERC2-207ENST00000564734 TCIRG1Q13488 830 aa17.99■□□□□ 0.47
HERC2-207ENST00000564734 NAA16Q6N069 864 aaPredicted RBP17.99■□□□□ 0.47
HERC2-207ENST00000564734 PHLPP1O60346 1717 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 837.8 ms