RNA–Protein interactions for RNA: ENST00000564257.1

NEIL1-203, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-203ENST00000564257 ZC3H12CQ9C0D7 883 aaKnown RBP27.58■■■□□ 2.01
NEIL1-203ENST00000564257 PODXL2Q9NZ53 605 aa27.58■■■□□ 2.01
NEIL1-203ENST00000564257 GGA1Q9UJY5 639 aa27.58■■■□□ 2.01
NEIL1-203ENST00000564257 TMEM88BA6NKF7 163 aa27.57■■■□□ 2
NEIL1-203ENST00000564257 G3V3G9 751 aa27.57■■■□□ 2
NEIL1-203ENST00000564257 DOK7Q18PE1 504 aa27.57■■■□□ 2
NEIL1-203ENST00000564257 DCAF8Q5TAQ9 597 aa27.57■■■□□ 2
NEIL1-203ENST00000564257 GREM2Q9H772 168 aa27.57■■■□□ 2
NEIL1-203ENST00000564257 MKRN1Q9UHC7 482 aaKnown RBP27.57■■■□□ 2
NEIL1-203ENST00000564257 ECE2O60344 883 aa27.56■■■□□ 2
NEIL1-203ENST00000564257 XDHP47989 1333 aa27.55■■■□□ 2
NEIL1-203ENST00000564257 F6X3S4 739 aa27.54■■■□□ 2
NEIL1-203ENST00000564257 RTL9Q8NET4 1388 aa27.54■■■□□ 2
NEIL1-203ENST00000564257 ZNF521Q96K83 1311 aa27.54■■■□□ 2
NEIL1-203ENST00000564257 PSMD14O00487 310 aa27.53■■■□□ 2
NEIL1-203ENST00000564257 ZBTB12Q9Y330 459 aaPredicted RBP27.53■■■□□ 2
NEIL1-203ENST00000564257 CNOT7Q9UIV1 285 aaKnown RBP27.52■■■□□ 2
NEIL1-203ENST00000564257 H7C1D1 291 aa27.51■■□□□ 1.99
NEIL1-203ENST00000564257 IGHMBP2P38935 993 aaKnown RBP27.51■■□□□ 1.99
NEIL1-203ENST00000564257 MICALL2Q8IY33 904 aa27.51■■□□□ 1.99
NEIL1-203ENST00000564257 PLA2G12BQ9BX93 195 aa27.51■■□□□ 1.99
NEIL1-203ENST00000564257 BSDC1Q9NW68 430 aaPredicted RBP27.51■■□□□ 1.99
NEIL1-203ENST00000564257 TRPM7Q96QT4 1865 aa27.51■■□□□ 1.99
NEIL1-203ENST00000564257 CNTNAP1P78357 1384 aa27.5■■□□□ 1.99
NEIL1-203ENST00000564257 SCN9AQ15858 1988 aa27.5■■□□□ 1.99
NEIL1-203ENST00000564257 ATP2B4P23634 1241 aa27.5■■□□□ 1.99
NEIL1-203ENST00000564257 PCNTO95613 3336 aa27.5■■□□□ 1.99
NEIL1-203ENST00000564257 ITGA6P23229 1130 aa27.49■■□□□ 1.99
NEIL1-203ENST00000564257 CASP7P55210 303 aa27.49■■□□□ 1.99
NEIL1-203ENST00000564257 FAM161AQ3B820 660 aa27.49■■□□□ 1.99
NEIL1-203ENST00000564257 DPF2Q92785 391 aa27.49■■□□□ 1.99
NEIL1-203ENST00000564257 KCNQ5Q9NR82 932 aa27.49■■□□□ 1.99
NEIL1-203ENST00000564257 SHTN1A0MZ66 631 aa27.48■■□□□ 1.99
NEIL1-203ENST00000564257 BEND3Q5T5X7 828 aa27.48■■□□□ 1.99
NEIL1-203ENST00000564257 ABT1Q9ULW3 272 aaKnown RBP27.48■■□□□ 1.99
NEIL1-203ENST00000564257 MINPP1Q9UNW1 487 aa27.48■■□□□ 1.99
NEIL1-203ENST00000564257 RPS12P25398 132 aaKnown RBP27.47■■□□□ 1.99
NEIL1-203ENST00000564257 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
NEIL1-203ENST00000564257 TRPM4Q8TD43 1214 aa27.47■■□□□ 1.99
NEIL1-203ENST00000564257 PSME4Q14997 1843 aa27.46■■□□□ 1.99
NEIL1-203ENST00000564257 E9PSI1 815 aa27.46■■□□□ 1.99
NEIL1-203ENST00000564257 TRAF5O00463 557 aa27.46■■□□□ 1.99
NEIL1-203ENST00000564257 FMR1Q06787 632 aaKnown RBP eCLIP27.46■■□□□ 1.99
NEIL1-203ENST00000564257 MPHOSPH8Q99549 860 aa27.46■■□□□ 1.99
NEIL1-203ENST00000564257 HSPA1AP0DMV8 641 aaKnown RBP27.45■■□□□ 1.98
NEIL1-203ENST00000564257 HSPA1BP0DMV9 641 aaKnown RBP27.45■■□□□ 1.98
NEIL1-203ENST00000564257 ZC3H15Q8WU90 426 aaKnown RBP27.45■■□□□ 1.98
NEIL1-203ENST00000564257 CHMP3Q9Y3E7 222 aa27.45■■□□□ 1.98
NEIL1-203ENST00000564257 CSF1RP07333 972 aa27.44■■□□□ 1.98
NEIL1-203ENST00000564257 HIRAP54198 1017 aaPredicted RBP27.44■■□□□ 1.98
NEIL1-203ENST00000564257 SAMD7Q7Z3H4 446 aa27.44■■□□□ 1.98
NEIL1-203ENST00000564257 ANKRD18BA2A2Z9 1011 aa27.43■■□□□ 1.98
NEIL1-203ENST00000564257 CCT4P50991 539 aaKnown RBP27.43■■□□□ 1.98
NEIL1-203ENST00000564257 TBC1D10BQ4KMP7 808 aaPredicted RBP27.43■■□□□ 1.98
NEIL1-203ENST00000564257 GLIS2Q9BZE0 524 aaPredicted RBP27.43■■□□□ 1.98
NEIL1-203ENST00000564257 MED23Q9ULK4 1368 aa27.43■■□□□ 1.98
NEIL1-203ENST00000564257 GRM8O00222 908 aa27.42■■□□□ 1.98
NEIL1-203ENST00000564257 VIL1P09327 827 aaKnown RBP27.42■■□□□ 1.98
NEIL1-203ENST00000564257 VEGFBP49765 207 aa27.42■■□□□ 1.98
NEIL1-203ENST00000564257 DEFB115Q30KQ5 88 aa27.42■■□□□ 1.98
NEIL1-203ENST00000564257 C9orf78Q9NZ63 289 aaPredicted RBP27.42■■□□□ 1.98
NEIL1-203ENST00000564257 PGAP2Q9UHJ9 254 aa27.42■■□□□ 1.98
NEIL1-203ENST00000564257 WTIPA6NIX2 430 aaPredicted RBP27.41■■□□□ 1.98
NEIL1-203ENST00000564257 RASSF10A6NK89 507 aa27.41■■□□□ 1.98
NEIL1-203ENST00000564257 RBM26Q5T8P6 1007 aaKnown RBP27.41■■□□□ 1.98
NEIL1-203ENST00000564257 SRCIN1Q9C0H9 1055 aa27.41■■□□□ 1.98
NEIL1-203ENST00000564257 ANKRD2Q9GZV1 360 aa27.41■■□□□ 1.98
NEIL1-203ENST00000564257 CCER2I3L3R5 266 aa27.4■■□□□ 1.98
NEIL1-203ENST00000564257 ALDH1L1O75891 902 aa27.4■■□□□ 1.98
NEIL1-203ENST00000564257 FOXO4P98177 505 aa27.4■■□□□ 1.98
NEIL1-203ENST00000564257 IFIT5Q13325 482 aaKnown RBP27.4■■□□□ 1.98
NEIL1-203ENST00000564257 PODNQ7Z5L7 613 aa27.4■■□□□ 1.98
NEIL1-203ENST00000564257 LEMD3Q9Y2U8 911 aa27.4■■□□□ 1.98
NEIL1-203ENST00000564257 SLFN5Q08AF3 891 aa27.39■■□□□ 1.98
NEIL1-203ENST00000564257 RSBN1LQ6PCB5 846 aaPredicted RBP27.39■■□□□ 1.98
NEIL1-203ENST00000564257 PAXIP1Q6ZW49 1069 aaPredicted RBP27.39■■□□□ 1.98
NEIL1-203ENST00000564257 CDC37L1Q7L3B6 337 aa27.39■■□□□ 1.98
NEIL1-203ENST00000564257 CELF2O95319 508 aaKnown RBP27.38■■□□□ 1.97
NEIL1-203ENST00000564257 EGFRP00533 1210 aa27.38■■□□□ 1.97
NEIL1-203ENST00000564257 KCNJ4P48050 445 aa27.38■■□□□ 1.97
NEIL1-203ENST00000564257 CST9Q5W186 159 aa27.38■■□□□ 1.97
NEIL1-203ENST00000564257 MRPL50Q8N5N7 158 aaKnown RBP27.38■■□□□ 1.97
NEIL1-203ENST00000564257 ZNF408Q9H9D4 720 aa27.38■■□□□ 1.97
NEIL1-203ENST00000564257 ZNF804BA4D1E1 1349 aa27.38■■□□□ 1.97
NEIL1-203ENST00000564257 USP17L3A6NCW0 530 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 USP17L4A6NCW7 530 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 CHRNDQ07001 517 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 KIF4BQ2VIQ3 1234 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 IFFO2Q5TF58 517 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 LMBR1LQ6UX01 489 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 USP17L1Q7RTZ2 530 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 AGBL3Q8NEM8 1001 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 A0A1B0GUL6 1792 aa27.37■■□□□ 1.97
NEIL1-203ENST00000564257 TAF7LQ5H9L4 462 aa27.36■■□□□ 1.97
NEIL1-203ENST00000564257 FBXW7Q969H0 707 aa27.36■■□□□ 1.97
NEIL1-203ENST00000564257 CDCA7LQ96GN5 454 aa27.36■■□□□ 1.97
NEIL1-203ENST00000564257 ZNF609O15014 1411 aa27.35■■□□□ 1.97
NEIL1-203ENST00000564257 CCDC57Q2TAC2 916 aa27.35■■□□□ 1.97
NEIL1-203ENST00000564257 EPHA10Q5JZY3 1008 aa27.35■■□□□ 1.97
NEIL1-203ENST00000564257 USP48Q86UV5 1035 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms