RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 DGAT1O75907 488 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 SASH3O75995 380 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 TNP2Q05952 138 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 FIGNL1Q6PIW4 674 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 TCF12Q99081 682 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 LNPKQ9C0E8 428 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 GPAMQ9HCL2 828 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 LATS2Q9NRM7 1088 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 ZFATQ9P243 1243 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 PPM1HQ9ULR3 514 aa3.96□□□□□ -1.77
CHD9-209ENST00000564255 TMEM238LA0A1B0GVL6 79 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 XRCC5P13010 732 aaKnown RBP3.96□□□□□ -1.78
CHD9-209ENST00000564255 BMP1P13497 986 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 EDN3P14138 238 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 SV2BQ7L1I2 683 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 ZFP42Q96MM3 310 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 PPP4R2Q9NY27 417 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 PDZRN3Q9UPQ7 1066 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 PCDHGC4Q9Y5F7 938 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 SLC35F4A4IF30 521 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 MMP20O60882 483 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 MAP3K6O95382 1288 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 SOX18P35713 384 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 PAK2Q13177 524 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 EFHC2Q5JST6 749 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 NOP9Q86U38 636 aaKnown RBP3.96□□□□□ -1.78
CHD9-209ENST00000564255 CNTNAP3BQ96NU0 1288 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 CNTNAP3Q9BZ76 1288 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 LIN7BQ9HAP6 207 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 ABCB6Q9NP58 842 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 KCNQ5Q9NR82 932 aa3.96□□□□□ -1.78
CHD9-209ENST00000564255 FAM187AA6NFU0 413 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 ATF4P18848 351 aaPredicted RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 COL13A1Q5TAT6 717 aaPredicted RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 VPS37DQ86XT2 251 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 GPRASP2Q96D09 838 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 GAS2L1Q99501 681 aaPredicted RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 STRN4Q9NRL3 753 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 TLR7Q9NYK1 1049 aaKnown RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 KANSL3Q9P2N6 904 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 HCN2Q9UL51 889 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 DNAJA1P31689 397 aaKnown RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 SOGA3Q5TF21 947 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 OXCT2Q9BYC2 517 aaPredicted RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 KBTBD4Q9NVX7 518 aa3.95□□□□□ -1.78
CHD9-209ENST00000564255 TTF2Q9UNY4 1162 aaKnown RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.95□□□□□ -1.78
CHD9-209ENST00000564255 RARAP10276 462 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 GARTP22102 1010 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 TARSP26639 723 aaKnown RBP3.94□□□□□ -1.78
CHD9-209ENST00000564255 GTF2F1P35269 517 aaKnown RBP eCLIP3.94□□□□□ -1.78
CHD9-209ENST00000564255 FCGRTP55899 365 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 PWP1Q13610 501 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 RELL1Q8IUW5 271 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 CCNJLQ8IV13 435 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 DNAJC2Q99543 621 aaKnown RBP3.94□□□□□ -1.78
CHD9-209ENST00000564255 NUCKS1Q9H1E3 243 aaKnown RBP3.94□□□□□ -1.78
CHD9-209ENST00000564255 ZFYVE1Q9HBF4 777 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 ADAMTS1Q9UHI8 967 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 PHF20L1A8MW92 1017 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 MAPTP10636 758 aaKnown RBP3.94□□□□□ -1.78
CHD9-209ENST00000564255 HYAL2Q12891 473 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 KRT25Q7Z3Z0 450 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 GMCL1Q96IK5 515 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 SEC16BQ96JE7 1060 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 RHOVQ96L33 236 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 TMEM74Q96NL1 305 aa3.94□□□□□ -1.78
CHD9-209ENST00000564255 KHNYNO15037 678 aaKnown RBP3.93□□□□□ -1.78
CHD9-209ENST00000564255 SMARCA5O60264 1052 aaPredicted RBP3.93□□□□□ -1.78
CHD9-209ENST00000564255 RLBP1P12271 317 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 ITPKAP23677 461 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 DBN1Q16643 649 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 CCDC144BQ3MJ40 725 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 GIMAP6Q6P9H5 292 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 CEP120Q8N960 986 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 SLC30A3Q99726 388 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 ZKSCAN3Q9BRR0 538 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 TRIM56Q9BRZ2 755 aaKnown RBP3.93□□□□□ -1.78
CHD9-209ENST00000564255 HIRIP3Q9BW71 556 aaPredicted RBP3.93□□□□□ -1.78
CHD9-209ENST00000564255 BHLHE41Q9C0J9 482 aaPredicted RBP3.93□□□□□ -1.78
CHD9-209ENST00000564255 NFKBIEO00221 500 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 PLAURQ03405 335 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 GRIN2CQ14957 1233 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 KIAA0825Q8IV33 1275 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 TRIM22Q8IYM9 498 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 TMEM102Q8N9M5 508 aaPredicted RBP3.93□□□□□ -1.78
CHD9-209ENST00000564255 MARK1Q9P0L2 795 aa3.93□□□□□ -1.78
CHD9-209ENST00000564255 H7C1W4 665 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 BNIP3LO60238 219 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 PSAPP07602 524 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 ACPPP15309 386 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 RPS26P11Q5JNZ5 115 aaPredicted RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 FAM182BQ5T319 152 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 DTHD1Q6ZMT9 781 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 EAF1Q96JC9 268 aaPredicted RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 OSMRQ99650 979 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.92□□□□□ -1.783e-6■■■□□ 18.8
CHD9-209ENST00000564255 NT5C1AQ9BXI3 368 aa3.92□□□□□ -1.78
CHD9-209ENST00000564255 NRG2O14511 850 aaPredicted RBP3.92□□□□□ -1.78
CHD9-209ENST00000564255 AXIN1O15169 862 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms