RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 CCDC85AQ96PX6 553 aaPredicted RBP12.24□□□□□ -0.45
CLN6-203ENST00000563917 WBP1LQ9NX94 342 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 POLLQ9UGP5 575 aa12.24□□□□□ -0.45
CLN6-203ENST00000563917 TAF1P21675 1872 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 IL16Q14005 1332 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
CLN6-203ENST00000563917 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
CLN6-203ENST00000563917 GPR101Q96P66 508 aaPredicted RBP12.23□□□□□ -0.45
CLN6-203ENST00000563917 SEC31BQ9NQW1 1179 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 PODXL2Q9NZ53 605 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
CLN6-203ENST00000563917 TLL2Q9Y6L7 1015 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
CLN6-203ENST00000563917 XDHP47989 1333 aa12.22□□□□□ -0.45
CLN6-203ENST00000563917 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
CLN6-203ENST00000563917 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
CLN6-203ENST00000563917 CYP4F22Q6NT55 531 aa12.22□□□□□ -0.45
CLN6-203ENST00000563917 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
CLN6-203ENST00000563917 JARID2Q92833 1246 aaPredicted RBP12.22□□□□□ -0.45
CLN6-203ENST00000563917 GLIS2Q9BZE0 524 aaPredicted RBP12.22□□□□□ -0.45
CLN6-203ENST00000563917 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
CLN6-203ENST00000563917 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
CLN6-203ENST00000563917 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.45
CLN6-203ENST00000563917 ATP2B4P23634 1241 aa12.21□□□□□ -0.45
CLN6-203ENST00000563917 MAP2K2P36507 400 aa12.21□□□□□ -0.45
CLN6-203ENST00000563917 LBX1P52954 281 aa12.21□□□□□ -0.45
CLN6-203ENST00000563917 CTSWP56202 376 aa12.21□□□□□ -0.45
CLN6-203ENST00000563917 FMR1Q06787 632 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLN6-203ENST00000563917 TBC1D10BQ4KMP7 808 aaPredicted RBP12.21□□□□□ -0.45
CLN6-203ENST00000563917 CST9Q5W186 159 aa12.21□□□□□ -0.45
CLN6-203ENST00000563917 TRPM4Q8TD43 1214 aa12.21□□□□□ -0.45
CLN6-203ENST00000563917 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
CLN6-203ENST00000563917 IGHMBP2P38935 993 aaKnown RBP12.2□□□□□ -0.46
CLN6-203ENST00000563917 HIRAP54198 1017 aaPredicted RBP12.2□□□□□ -0.46
CLN6-203ENST00000563917 FKBP5Q13451 457 aaPredicted RBP12.2□□□□□ -0.46
CLN6-203ENST00000563917 SAMD7Q7Z3H4 446 aa12.2□□□□□ -0.46
CLN6-203ENST00000563917 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
CLN6-203ENST00000563917 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
CLN6-203ENST00000563917 USP48Q86UV5 1035 aa12.2□□□□□ -0.46
CLN6-203ENST00000563917 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
CLN6-203ENST00000563917 HHIPL1Q96JK4 782 aa12.2□□□□□ -0.46
CLN6-203ENST00000563917 SALL2Q9Y467 1007 aaPredicted RBP12.2□□□□□ -0.46
CLN6-203ENST00000563917 DUOX1Q9NRD9 1551 aa12.2□□□□□ -0.46
CLN6-203ENST00000563917 VIL1P09327 827 aaKnown RBP12.19□□□□□ -0.46
CLN6-203ENST00000563917 FLIIQ13045 1269 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 CWF19L2Q2TBE0 894 aaKnown RBP12.19□□□□□ -0.46
CLN6-203ENST00000563917 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 CCDC184Q52MB2 194 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 UBE3BQ7Z3V4 1068 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 PODNQ7Z5L7 613 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 C2orf69Q8N8R5 385 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
CLN6-203ENST00000563917 NEURL1BA8MQ27 555 aa12.18□□□□□ -0.46
CLN6-203ENST00000563917 CA12O43570 354 aa12.18□□□□□ -0.46
CLN6-203ENST00000563917 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
CLN6-203ENST00000563917 HUNKP57058 714 aa12.18□□□□□ -0.46
CLN6-203ENST00000563917 TTLL11Q8NHH1 800 aa12.18□□□□□ -0.46
CLN6-203ENST00000563917 BSDC1Q9NW68 430 aaPredicted RBP12.18□□□□□ -0.46
CLN6-203ENST00000563917 FANCIQ9NVI1 1328 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 SHTN1A0MZ66 631 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 USP17L3A6NCW0 530 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 USP17L4A6NCW7 530 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 HSPA8P11142 646 aaKnown RBP12.17□□□□□ -0.46
CLN6-203ENST00000563917 KCNJ4P48050 445 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 NOGQ13253 232 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 RSBN1LQ6PCB5 846 aaPredicted RBP12.17□□□□□ -0.46
CLN6-203ENST00000563917 USP17L1Q7RTZ2 530 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 LINS1Q8NG48 757 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 DNAAF4Q8WXU2 420 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 GREM2Q9H772 168 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 KCNQ5Q9NR82 932 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 RTL9Q8NET4 1388 aa12.17□□□□□ -0.46
CLN6-203ENST00000563917 H7C1W4 665 aa12.16□□□□□ -0.46
CLN6-203ENST00000563917 AOC2O75106 756 aa12.16□□□□□ -0.46
CLN6-203ENST00000563917 CCT4P50991 539 aaKnown RBP12.16□□□□□ -0.46
CLN6-203ENST00000563917 GCKRQ14397 625 aa12.16□□□□□ -0.46
CLN6-203ENST00000563917 G2E3Q7L622 706 aa12.16□□□□□ -0.46
CLN6-203ENST00000563917 GBA2Q9HCG7 927 aaPredicted RBP12.16□□□□□ -0.46
CLN6-203ENST00000563917 GGA3Q9NZ52 723 aa12.16□□□□□ -0.46
CLN6-203ENST00000563917 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
CLN6-203ENST00000563917 LEMD3Q9Y2U8 911 aa12.16□□□□□ -0.46
CLN6-203ENST00000563917 PCNTO95613 3336 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 ITGA6P23229 1130 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
CLN6-203ENST00000563917 EXOSC9Q06265 439 aaKnown RBP12.15□□□□□ -0.46
CLN6-203ENST00000563917 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 COA1Q9GZY4 146 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 CHMP3Q9Y3E7 222 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 MYH3P11055 1940 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 MED23Q9ULK4 1368 aa12.15□□□□□ -0.46
CLN6-203ENST00000563917 MYO3BQ8WXR4 1341 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms