RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 VSIG8P0DPA2 414 aa11.13□□□□□ -0.63
SMG1-209ENST00000563836 SLC9A9Q8IVB4 645 aa11.13□□□□□ -0.63
SMG1-209ENST00000563836 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
SMG1-209ENST00000563836 LTKP29376 864 aa11.12□□□□□ -0.63
SMG1-209ENST00000563836 NANOS1Q8WY41 292 aaKnown RBP11.12□□□□□ -0.63
SMG1-209ENST00000563836 PRAM1Q96QH2 718 aa11.12□□□□□ -0.63
SMG1-209ENST00000563836 NOVA2Q9UNW9 492 aaKnown RBP11.12□□□□□ -0.63
SMG1-209ENST00000563836 DLC1Q96QB1 1528 aa11.12□□□□□ -0.63
SMG1-209ENST00000563836 KNDC1Q76NI1 1749 aa11.12□□□□□ -0.63
SMG1-209ENST00000563836 PLA2G4AP47712 749 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 LCE2CQ5TA81 110 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 FAM200AQ8TCP9 573 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
SMG1-209ENST00000563836 TESK2Q96S53 571 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 TSPAN10Q9H1Z9 355 aaPredicted RBP11.11□□□□□ -0.63
SMG1-209ENST00000563836 CABP1Q9NZU7 370 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 ZMIZ1Q9ULJ6 1067 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 ABCC11Q96J66 1382 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 PIK3R4Q99570 1358 aa11.11□□□□□ -0.63
SMG1-209ENST00000563836 F11P03951 625 aa11.1□□□□□ -0.63
SMG1-209ENST00000563836 SAFB2Q14151 953 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMG1-209ENST00000563836 TEAD4Q15561 434 aa11.1□□□□□ -0.63
SMG1-209ENST00000563836 TMC1Q8TDI8 760 aa11.1□□□□□ -0.63
SMG1-209ENST00000563836 IRF7Q92985 503 aa11.1□□□□□ -0.63
SMG1-209ENST00000563836 SLC26A8Q96RN1 970 aa11.1□□□□□ -0.63
SMG1-209ENST00000563836 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
SMG1-209ENST00000563836 CUEDC1Q9NWM3 386 aaPredicted RBP11.1□□□□□ -0.63
SMG1-209ENST00000563836 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
SMG1-209ENST00000563836 NRXN3Q9Y4C0 1643 aa11.09□□□□□ -0.63
SMG1-209ENST00000563836 SETD1AO15047 1707 aaKnown RBP11.09□□□□□ -0.63
SMG1-209ENST00000563836 DISP3Q9P2K9 1392 aa11.09□□□□□ -0.63
SMG1-209ENST00000563836 ZDHHC1Q8WTX9 485 aa11.09□□□□□ -0.63
SMG1-209ENST00000563836 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
SMG1-209ENST00000563836 KNSTRNQ9Y448 316 aa11.09□□□□□ -0.63
SMG1-209ENST00000563836 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
SMG1-209ENST00000563836 ATAD2Q6PL18 1390 aa11.08□□□□□ -0.64
SMG1-209ENST00000563836 NINLQ9Y2I6 1382 aa11.08□□□□□ -0.64
SMG1-209ENST00000563836 TBCELQ5QJ74 424 aa11.08□□□□□ -0.64
SMG1-209ENST00000563836 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
SMG1-209ENST00000563836 FAM135BQ49AJ0 1406 aa11.08□□□□□ -0.64
SMG1-209ENST00000563836 METP08581 1390 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
SMG1-209ENST00000563836 C21orf2O43822 256 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 MSX1P28360 303 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 NOS2P35228 1153 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 PSMA6P60900 246 aaKnown RBP11.07□□□□□ -0.64
SMG1-209ENST00000563836 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 C1orf216Q8TAB5 229 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 HINFPQ9BQA5 517 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 ASXL1Q8IXJ9 1541 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 ADAMTS13Q76LX8 1427 aa11.07□□□□□ -0.64
SMG1-209ENST00000563836 CPS1P31327 1500 aa11.06□□□□□ -0.64
SMG1-209ENST00000563836 H7C1W4 665 aa11.06□□□□□ -0.64
SMG1-209ENST00000563836 RIPOR1Q6ZS17 1223 aa11.06□□□□□ -0.64
SMG1-209ENST00000563836 STK32AQ8WU08 396 aa11.06□□□□□ -0.64
SMG1-209ENST00000563836 ZDHHC3Q9NYG2 299 aa11.06□□□□□ -0.64
SMG1-209ENST00000563836 TECPR2O15040 1411 aa11.06□□□□□ -0.64
SMG1-209ENST00000563836 CCER2I3L3R5 266 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 ATP4AP20648 1035 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 RALBP1Q15311 655 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 DBN1Q16643 649 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 SWI5Q1ZZU3 235 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 SV2AQ7L0J3 742 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 HDGFL2Q7Z4V5 671 aaPredicted RBP11.05□□□□□ -0.64
SMG1-209ENST00000563836 VWA5B2Q8N398 1253 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 ZNF837Q96EG3 531 aaPredicted RBP11.05□□□□□ -0.64
SMG1-209ENST00000563836 GPAMQ9HCL2 828 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 PARP3Q9Y6F1 533 aa11.05□□□□□ -0.64
SMG1-209ENST00000563836 SERTM1A2A2V5 107 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 CDC14CA4D256 554 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 EML1O00423 815 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
SMG1-209ENST00000563836 WAPLQ7Z5K2 1190 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 SCG3Q8WXD2 468 aaKnown RBP11.04□□□□□ -0.64
SMG1-209ENST00000563836 AIDAQ96BJ3 306 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 CDK19Q9BWU1 502 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 CRISPLD1Q9H336 500 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 PANK3Q9H999 370 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 MED14O60244 1454 aa11.04□□□□□ -0.64
SMG1-209ENST00000563836 PTCH1Q13635 1447 aa11.03□□□□□ -0.64
SMG1-209ENST00000563836 IGFBP4P22692 258 aa11.03□□□□□ -0.64
SMG1-209ENST00000563836 WEE1P30291 646 aa11.03□□□□□ -0.64
SMG1-209ENST00000563836 LBRQ14739 615 aaKnown RBP11.03□□□□□ -0.64
SMG1-209ENST00000563836 TMEM164Q5U3C3 297 aa11.03□□□□□ -0.64
SMG1-209ENST00000563836 GPR161Q8N6U8 529 aaKnown RBP11.03□□□□□ -0.64
SMG1-209ENST00000563836 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.64
SMG1-209ENST00000563836 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
SMG1-209ENST00000563836 LGR5O75473 907 aa11.02□□□□□ -0.65
SMG1-209ENST00000563836 THBS1P07996 1170 aa11.02□□□□□ -0.65
SMG1-209ENST00000563836 TXLNAP40222 546 aa11.02□□□□□ -0.65
SMG1-209ENST00000563836 CNGB1Q14028 1251 aaPredicted RBP11.02□□□□□ -0.65
SMG1-209ENST00000563836 SH3PXD2AQ5TCZ1 1133 aa11.02□□□□□ -0.65
SMG1-209ENST00000563836 ARID3AQ99856 593 aa11.02□□□□□ -0.65
SMG1-209ENST00000563836 C2orf49Q9BVC5 232 aaPredicted RBP11.02□□□□□ -0.65
SMG1-209ENST00000563836 NUCKS1Q9H1E3 243 aaKnown RBP11.02□□□□□ -0.65
SMG1-209ENST00000563836 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms