RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
SPSB3-204ENST00000563741 SALL3Q9BXA9 1300 aa23.81■■□□□ 1.4
SPSB3-204ENST00000563741 TNRC6CQ9HCJ0 1690 aaKnown RBP23.81■■□□□ 1.4
SPSB3-204ENST00000563741 TAF7LQ5H9L4 462 aa23.81■■□□□ 1.4
SPSB3-204ENST00000563741 ARHGAP27Q6ZUM4 889 aa23.81■■□□□ 1.4
SPSB3-204ENST00000563741 LRRC24Q50LG9 513 aa23.8■■□□□ 1.4
SPSB3-204ENST00000563741 PUS3Q9BZE2 481 aaKnown RBP23.8■■□□□ 1.4
SPSB3-204ENST00000563741 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
SPSB3-204ENST00000563741 GOLGB1Q14789 3259 aaKnown RBP23.8■■□□□ 1.4
SPSB3-204ENST00000563741 SRGNP10124 158 aa23.79■■□□□ 1.4
SPSB3-204ENST00000563741 IL15P40933 162 aaPredicted RBP23.79■■□□□ 1.4
SPSB3-204ENST00000563741 STYK1Q6J9G0 422 aa23.79■■□□□ 1.4
SPSB3-204ENST00000563741 SEC31BQ9NQW1 1179 aa23.79■■□□□ 1.4
SPSB3-204ENST00000563741 KLRG2A4D1S0 409 aaPredicted RBP23.79■■□□□ 1.4
SPSB3-204ENST00000563741 CLASRPQ8N2M8 674 aaKnown RBP23.79■■□□□ 1.4
SPSB3-204ENST00000563741 MASTLQ96GX5 879 aa23.79■■□□□ 1.4
SPSB3-204ENST00000563741 NLRP3Q96P20 1036 aa23.79■■□□□ 1.4
SPSB3-204ENST00000563741 TFCP2Q12800 502 aa23.78■■□□□ 1.4
SPSB3-204ENST00000563741 CNKSR1Q969H4 720 aa23.78■■□□□ 1.4
SPSB3-204ENST00000563741 COL4A1P02462 1669 aa23.77■■□□□ 1.4
SPSB3-204ENST00000563741 MX1P20591 662 aa23.76■■□□□ 1.39
SPSB3-204ENST00000563741 NPR1P16066 1061 aa23.76■■□□□ 1.39
SPSB3-204ENST00000563741 LDHAL6AQ6ZMR3 332 aa23.76■■□□□ 1.39
SPSB3-204ENST00000563741 PDE1AP54750 535 aa23.75■■□□□ 1.39
SPSB3-204ENST00000563741 CACNA1SQ13698 1873 aa23.75■■□□□ 1.39
SPSB3-204ENST00000563741 AACSQ86V21 672 aa23.75■■□□□ 1.39
SPSB3-204ENST00000563741 EAF2Q96CJ1 260 aaPredicted RBP23.75■■□□□ 1.39
SPSB3-204ENST00000563741 OSBPL3Q9H4L5 887 aa23.75■■□□□ 1.39
SPSB3-204ENST00000563741 RIPOR2Q9Y4F9 1068 aa23.75■■□□□ 1.39
SPSB3-204ENST00000563741 UTRNP46939 3433 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 TNNI3KQ59H18 835 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 TSHZ3Q63HK5 1081 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 CDC5LQ99459 802 aaKnown RBP23.73■■□□□ 1.39
SPSB3-204ENST00000563741 STAP2Q9UGK3 403 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 FPGT-TNNI3KV9GXZ4 949 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 SLX4Q8IY92 1834 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 BMP2KLQ5H9B9 411 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 CNNM1Q9NRU3 951 aa23.73■■□□□ 1.39
SPSB3-204ENST00000563741 CRY2Q49AN0 593 aa23.72■■□□□ 1.39
SPSB3-204ENST00000563741 TLR7Q9NYK1 1049 aaKnown RBP23.72■■□□□ 1.39
SPSB3-204ENST00000563741 ZNF609O15014 1411 aa23.72■■□□□ 1.39
SPSB3-204ENST00000563741 IFIT2P09913 472 aaKnown RBP23.71■■□□□ 1.39
SPSB3-204ENST00000563741 GSPT1P15170 499 aaKnown RBP23.71■■□□□ 1.39
SPSB3-204ENST00000563741 IGHMBP2P38935 993 aaKnown RBP23.71■■□□□ 1.39
SPSB3-204ENST00000563741 TTC22Q5TAA0 569 aa23.71■■□□□ 1.39
SPSB3-204ENST00000563741 PRPF40BQ6NWY9 871 aaKnown RBP23.71■■□□□ 1.39
SPSB3-204ENST00000563741 ZNF784Q8NCA9 323 aaPredicted RBP23.71■■□□□ 1.39
SPSB3-204ENST00000563741 MPHOSPH8Q99549 860 aa23.71■■□□□ 1.39
SPSB3-204ENST00000563741 GPR108Q9NPR9 543 aa23.71■■□□□ 1.39
SPSB3-204ENST00000563741 CEP126Q9P2H0 1117 aa23.71■■□□□ 1.39
SPSB3-204ENST00000563741 AOX1Q06278 1338 aa23.71■■□□□ 1.39
SPSB3-204ENST00000563741 C21orf2O43822 256 aa23.7■■□□□ 1.38
SPSB3-204ENST00000563741 METTL24Q5JXM2 366 aa23.7■■□□□ 1.38
SPSB3-204ENST00000563741 ANKRD18AQ8IVF6 992 aa23.7■■□□□ 1.38
SPSB3-204ENST00000563741 VGLL2Q8N8G2 317 aa23.7■■□□□ 1.38
SPSB3-204ENST00000563741 CELF1Q92879 486 aaKnown RBP23.7■■□□□ 1.38
SPSB3-204ENST00000563741 CCDC8Q9H0W5 538 aaPredicted RBP23.7■■□□□ 1.38
SPSB3-204ENST00000563741 SBF1O95248 1867 aa23.69■■□□□ 1.38
SPSB3-204ENST00000563741 ALDH1B1P30837 517 aa23.69■■□□□ 1.38
SPSB3-204ENST00000563741 RPGRQ92834 1020 aaKnown RBP23.69■■□□□ 1.38
SPSB3-204ENST00000563741 DBNLQ9UJU6 430 aaKnown RBP23.69■■□□□ 1.38
SPSB3-204ENST00000563741 MROH5Q6ZUA9 1318 aa23.68■■□□□ 1.38
SPSB3-204ENST00000563741 DDX46Q7L014 1031 aaKnown RBP23.68■■□□□ 1.38
SPSB3-204ENST00000563741 ZNF219Q9P2Y4 722 aaPredicted RBP23.68■■□□□ 1.38
SPSB3-204ENST00000563741 TTC41PQ6P2S7 1318 aa23.68■■□□□ 1.38
SPSB3-204ENST00000563741 SPEF2Q9C093 1822 aa23.68■■□□□ 1.38
SPSB3-204ENST00000563741 HOXA10P31260 410 aaPredicted RBP23.67■■□□□ 1.38
SPSB3-204ENST00000563741 C8orf34Q49A92 452 aa23.67■■□□□ 1.38
SPSB3-204ENST00000563741 SOGA3Q5TF21 947 aa23.67■■□□□ 1.38
SPSB3-204ENST00000563741 PI4K2BQ8TCG2 481 aa23.67■■□□□ 1.38
SPSB3-204ENST00000563741 TAF1P21675 1872 aa23.67■■□□□ 1.38
SPSB3-204ENST00000563741 ECHDC1Q9NTX5 307 aa23.67■■□□□ 1.38
SPSB3-204ENST00000563741 BSDC1Q9NW68 430 aaPredicted RBP23.67■■□□□ 1.38
SPSB3-204ENST00000563741 A0A1B0GUL7 405 aa23.66■■□□□ 1.38
SPSB3-204ENST00000563741 RPS8P62241 208 aaKnown RBP23.66■■□□□ 1.38
SPSB3-204ENST00000563741 GPATCH3Q96I76 525 aa23.66■■□□□ 1.38
SPSB3-204ENST00000563741 DBNDD2Q9BQY9 259 aa23.66■■□□□ 1.38
SPSB3-204ENST00000563741 FER1L6Q2WGJ9 1857 aa23.66■■□□□ 1.38
SPSB3-204ENST00000563741 PDE8BO95263 885 aa23.65■■□□□ 1.38
SPSB3-204ENST00000563741 C9orf131Q5VYM1 1079 aa23.65■■□□□ 1.38
SPSB3-204ENST00000563741 RBM17Q96I25 401 aaKnown RBP23.65■■□□□ 1.38
SPSB3-204ENST00000563741 AKAP2Q9Y2D5 859 aa23.65■■□□□ 1.38
SPSB3-204ENST00000563741 TIMM10P62072 90 aa23.64■■□□□ 1.38
SPSB3-204ENST00000563741 RASSF7Q02833 373 aa23.64■■□□□ 1.38
SPSB3-204ENST00000563741 GRAPQ13588 217 aa23.64■■□□□ 1.38
SPSB3-204ENST00000563741 GRAPLQ8TC17 118 aaPredicted RBP23.64■■□□□ 1.38
SPSB3-204ENST00000563741 C7orf43Q8WVR3 580 aa23.64■■□□□ 1.38
SPSB3-204ENST00000563741 CRAMP1Q96RY5 1269 aa23.64■■□□□ 1.38
SPSB3-204ENST00000563741 CCDC88AQ3V6T2 1871 aa23.64■■□□□ 1.38
SPSB3-204ENST00000563741 HELBQ8NG08 1087 aaPredicted RBP23.64■■□□□ 1.37
SPSB3-204ENST00000563741 CHRNDQ07001 517 aa23.63■■□□□ 1.37
SPSB3-204ENST00000563741 ATP2B3Q16720 1220 aa23.63■■□□□ 1.37
SPSB3-204ENST00000563741 NEUROD6Q96NK8 337 aa23.63■■□□□ 1.37
SPSB3-204ENST00000563741 BACH2Q9BYV9 841 aa23.63■■□□□ 1.37
SPSB3-204ENST00000563741 RNF181Q9P0P0 153 aa23.63■■□□□ 1.37
SPSB3-204ENST00000563741 NFKBIEO00221 500 aa23.62■■□□□ 1.37
SPSB3-204ENST00000563741 GLRX3O76003 335 aaKnown RBP23.62■■□□□ 1.37
SPSB3-204ENST00000563741 LMNB1P20700 586 aa23.62■■□□□ 1.37
SPSB3-204ENST00000563741 ERC2O15083 957 aa23.62■■□□□ 1.37
SPSB3-204ENST00000563741 SDSP20132 328 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms