RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 ITGA6P23229 1130 aa18.79■□□□□ 0.6
RPUSD1-204ENST00000563560 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
RPUSD1-204ENST00000563560 TMX4Q9H1E5 349 aaPredicted RBP18.79■□□□□ 0.6
RPUSD1-204ENST00000563560 IRS2Q9Y4H2 1338 aa18.78■□□□□ 0.6
RPUSD1-204ENST00000563560 ZNF609O15014 1411 aa18.78■□□□□ 0.6
RPUSD1-204ENST00000563560 EIF6P56537 245 aaKnown RBP18.78■□□□□ 0.6
RPUSD1-204ENST00000563560 SMC1BQ8NDV3 1235 aa18.78■□□□□ 0.6
RPUSD1-204ENST00000563560 XDHP47989 1333 aa18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 IQCA1LA6NCM1 817 aa18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 WASHC4Q2M389 1173 aa18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 SLC4A10Q6U841 1118 aa18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 SUCLG2Q96I99 432 aa18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 SMC4Q9NTJ3 1288 aa18.77■□□□□ 0.6
RPUSD1-204ENST00000563560 C16orf71Q8IYS4 520 aaPredicted RBP18.76■□□□□ 0.59
RPUSD1-204ENST00000563560 KCNQ5Q9NR82 932 aa18.76■□□□□ 0.59
RPUSD1-204ENST00000563560 HACL1Q9UJ83 578 aa18.76■□□□□ 0.59
RPUSD1-204ENST00000563560 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 EPHX2P34913 555 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 EPS15P42566 896 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 HNRNPUQ00839 825 aaKnown RBP eCLIP18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 LMBR1LQ6UX01 489 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 DNAJC5GQ8N7S2 189 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 DBNDD1Q9H9R9 158 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 GGA1Q9UJY5 639 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 MED23Q9ULK4 1368 aa18.75■□□□□ 0.59
RPUSD1-204ENST00000563560 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 C6orf229H3BNL8 230 aa18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 RIMBP2O15034 1052 aa18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 UFL1O94874 794 aa18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 LDHDQ86WU2 507 aa18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 GPRC5DQ9NZD1 345 aa18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 NOB1Q9ULX3 412 aaKnown RBP18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 GJA3Q9Y6H8 435 aa18.74■□□□□ 0.59
RPUSD1-204ENST00000563560 ECE2O60344 883 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 RAD17O75943 681 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 ITGBL1O95965 494 aaPredicted RBP18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 ATP2B4P23634 1241 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 CCT4P50991 539 aaKnown RBP18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 CIAPIN1Q6FI81 312 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 CHADLQ6NUI6 762 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 TXNRD3Q86VQ6 643 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 EYA3Q99504 573 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 ANKIB1Q9P2G1 1089 aa18.73■□□□□ 0.59
RPUSD1-204ENST00000563560 TRPM7Q96QT4 1865 aa18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 ANKRD18BA2A2Z9 1011 aa18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 PSMD14O00487 310 aa18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 GMPSP49915 693 aaPredicted RBP18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 APLP1P51693 650 aa18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 DOK7Q18PE1 504 aa18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 ARHGAP45Q92619 1136 aa18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 POLR2AP24928 1970 aaKnown RBP18.72■□□□□ 0.59
RPUSD1-204ENST00000563560 SHTN1A0MZ66 631 aa18.71■□□□□ 0.59
RPUSD1-204ENST00000563560 KLRK1P26718 216 aa18.71■□□□□ 0.59
RPUSD1-204ENST00000563560 IGHMBP2P38935 993 aaKnown RBP18.71■□□□□ 0.59
RPUSD1-204ENST00000563560 CHRNDQ07001 517 aa18.71■□□□□ 0.59
RPUSD1-204ENST00000563560 ZNF594Q96JF6 807 aaPredicted RBP18.71■□□□□ 0.59
RPUSD1-204ENST00000563560 BICC1Q9H694 974 aaKnown RBP18.71■□□□□ 0.59
RPUSD1-204ENST00000563560 BCAR3O75815 825 aa18.7■□□□□ 0.58
RPUSD1-204ENST00000563560 IFIT5Q13325 482 aaKnown RBP18.7■□□□□ 0.58
RPUSD1-204ENST00000563560 DPF2Q92785 391 aa18.7■□□□□ 0.58
RPUSD1-204ENST00000563560 ZC3H12CQ9C0D7 883 aaKnown RBP18.7■□□□□ 0.58
RPUSD1-204ENST00000563560 SNAP23O00161 211 aa18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 VIL1P09327 827 aaKnown RBP18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 HIRAP54198 1017 aaPredicted RBP18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 HTRA3P83110 453 aa18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 TNIP1Q15025 636 aa18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 GMLQ99445 158 aa18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 PGAP2Q9UHJ9 254 aa18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 TNNQ9UQP3 1299 aa18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 LEMD3Q9Y2U8 911 aa18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
RPUSD1-204ENST00000563560 RFX5P48382 616 aaPredicted RBP18.68■□□□□ 0.58
RPUSD1-204ENST00000563560 INTS3Q68E01 1043 aaKnown RBP18.68■□□□□ 0.58
RPUSD1-204ENST00000563560 USP50Q70EL3 339 aaPredicted RBP18.68■□□□□ 0.58
RPUSD1-204ENST00000563560 ZNF804BA4D1E1 1349 aa18.68■□□□□ 0.58
RPUSD1-204ENST00000563560 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
RPUSD1-204ENST00000563560 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
RPUSD1-204ENST00000563560 API5Q9BZZ5 524 aaKnown RBP18.67■□□□□ 0.58
RPUSD1-204ENST00000563560 ANKRD2Q9GZV1 360 aa18.67■□□□□ 0.58
RPUSD1-204ENST00000563560 ADARB2Q9NS39 739 aaKnown RBP18.67■□□□□ 0.58
RPUSD1-204ENST00000563560 RIPOR2Q9Y4F9 1068 aa18.67■□□□□ 0.58
RPUSD1-204ENST00000563560 ARAP2Q8WZ64 1704 aa18.66■□□□□ 0.58
RPUSD1-204ENST00000563560 EGFRP00533 1210 aa18.66■□□□□ 0.58
RPUSD1-204ENST00000563560 TRIM27P14373 513 aa18.66■□□□□ 0.58
RPUSD1-204ENST00000563560 EAPPQ56P03 285 aaPredicted RBP18.66■□□□□ 0.58
RPUSD1-204ENST00000563560 PODNQ7Z5L7 613 aa18.66■□□□□ 0.58
RPUSD1-204ENST00000563560 TRPM4Q8TD43 1214 aa18.66■□□□□ 0.58
RPUSD1-204ENST00000563560 PUS3Q9BZE2 481 aaKnown RBP18.66■□□□□ 0.58
RPUSD1-204ENST00000563560 TAF5LO75529 589 aa18.65■□□□□ 0.58
RPUSD1-204ENST00000563560 RPS12P25398 132 aaKnown RBP18.65■□□□□ 0.58
RPUSD1-204ENST00000563560 LMOD1P29536 600 aaPredicted RBP18.65■□□□□ 0.58
RPUSD1-204ENST00000563560 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
RPUSD1-204ENST00000563560 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
RPUSD1-204ENST00000563560 HELBQ8NG08 1087 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms