RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 XDHP47989 1333 aa23.56■■□□□ 1.36
CDH11-206ENST00000562998 IPO8O15397 1037 aaKnown RBP23.55■■□□□ 1.36
CDH11-206ENST00000562998 IGHMBP2P38935 993 aaKnown RBP23.55■■□□□ 1.36
CDH11-206ENST00000562998 IFIT5Q13325 482 aaKnown RBP23.55■■□□□ 1.36
CDH11-206ENST00000562998 WASHC4Q2M389 1173 aa23.55■■□□□ 1.36
CDH11-206ENST00000562998 ATF7IPQ6VMQ6 1270 aa23.55■■□□□ 1.36
CDH11-206ENST00000562998 GPC2Q8N158 579 aa23.55■■□□□ 1.36
CDH11-206ENST00000562998 BICC1Q9H694 974 aaKnown RBP23.55■■□□□ 1.36
CDH11-206ENST00000562998 ZNRF3Q9ULT6 936 aa23.55■■□□□ 1.36
CDH11-206ENST00000562998 TOMM70O94826 608 aa23.54■■□□□ 1.36
CDH11-206ENST00000562998 ANKIB1Q9P2G1 1089 aa23.54■■□□□ 1.36
CDH11-206ENST00000562998 GGA1Q9UJY5 639 aa23.54■■□□□ 1.36
CDH11-206ENST00000562998 TNNQ9UQP3 1299 aa23.54■■□□□ 1.36
CDH11-206ENST00000562998 SCN4AP35499 1836 aa23.54■■□□□ 1.36
CDH11-206ENST00000562998 C6orf229H3BNL8 230 aa23.53■■□□□ 1.36
CDH11-206ENST00000562998 EYA3Q99504 573 aa23.53■■□□□ 1.36
CDH11-206ENST00000562998 WTIPA6NIX2 430 aaPredicted RBP23.52■■□□□ 1.36
CDH11-206ENST00000562998 YDJCA8MPS7 323 aa23.52■■□□□ 1.36
CDH11-206ENST00000562998 UFL1O94874 794 aa23.52■■□□□ 1.36
CDH11-206ENST00000562998 ATP2B4P23634 1241 aa23.52■■□□□ 1.36
CDH11-206ENST00000562998 EIF6P56537 245 aaKnown RBP23.52■■□□□ 1.36
CDH11-206ENST00000562998 CXCL9Q07325 125 aa23.52■■□□□ 1.36
CDH11-206ENST00000562998 GPR101Q96P66 508 aaPredicted RBP23.52■■□□□ 1.36
CDH11-206ENST00000562998 A0A1B0GUL6 1792 aa23.52■■□□□ 1.36
CDH11-206ENST00000562998 CCDC57Q2TAC2 916 aa23.51■■□□□ 1.35
CDH11-206ENST00000562998 FRAT1Q92837 279 aaPredicted RBP23.51■■□□□ 1.35
CDH11-206ENST00000562998 MPHOSPH8Q99549 860 aa23.51■■□□□ 1.35
CDH11-206ENST00000562998 ZKSCAN2Q63HK3 967 aa23.5■■□□□ 1.35
CDH11-206ENST00000562998 RBM46Q8TBY0 533 aaKnown RBP23.5■■□□□ 1.35
CDH11-206ENST00000562998 CHMP3Q9Y3E7 222 aa23.5■■□□□ 1.35
CDH11-206ENST00000562998 CHRNDQ07001 517 aa23.49■■□□□ 1.35
CDH11-206ENST00000562998 ZNF594Q96JF6 807 aaPredicted RBP23.49■■□□□ 1.35
CDH11-206ENST00000562998 ZC3H12CQ9C0D7 883 aaKnown RBP23.49■■□□□ 1.35
CDH11-206ENST00000562998 ANKRD2Q9GZV1 360 aa23.49■■□□□ 1.35
CDH11-206ENST00000562998 LEMD3Q9Y2U8 911 aa23.49■■□□□ 1.35
CDH11-206ENST00000562998 IQCA1LA6NCM1 817 aa23.48■■□□□ 1.35
CDH11-206ENST00000562998 RIMBP2O15034 1052 aa23.48■■□□□ 1.35
CDH11-206ENST00000562998 MEIS3Q99687 375 aa23.48■■□□□ 1.35
CDH11-206ENST00000562998 MED23Q9ULK4 1368 aa23.48■■□□□ 1.35
CDH11-206ENST00000562998 SCN9AQ15858 1988 aa23.47■■□□□ 1.35
CDH11-206ENST00000562998 UBTFL1P0CB47 393 aaPredicted RBP23.47■■□□□ 1.35
CDH11-206ENST00000562998 SCNN1DP51172 638 aa23.47■■□□□ 1.35
CDH11-206ENST00000562998 TAF1DQ9H5J8 278 aaPredicted RBP23.47■■□□□ 1.35
CDH11-206ENST00000562998 DBNDD1Q9H9R9 158 aa23.47■■□□□ 1.35
CDH11-206ENST00000562998 IRS2Q9Y4H2 1338 aa23.47■■□□□ 1.35
CDH11-206ENST00000562998 CIAPIN1Q6FI81 312 aa23.46■■□□□ 1.35
CDH11-206ENST00000562998 LDHAL6AQ6ZMR3 332 aa23.46■■□□□ 1.35
CDH11-206ENST00000562998 GJA3Q9Y6H8 435 aa23.46■■□□□ 1.35
CDH11-206ENST00000562998 ADAMTSL1Q8N6G6 1762 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 ZNF804BA4D1E1 1349 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 ECE2O60344 883 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 RAD17O75943 681 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 RFX5P48382 616 aaPredicted RBP23.45■■□□□ 1.34
CDH11-206ENST00000562998 DOK7Q18PE1 504 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 C16orf71Q8IYS4 520 aaPredicted RBP23.45■■□□□ 1.34
CDH11-206ENST00000562998 CLUAP1Q96AJ1 413 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 HACL1Q9UJ83 578 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 RIPOR2Q9Y4F9 1068 aa23.45■■□□□ 1.34
CDH11-206ENST00000562998 TNIP1Q15025 636 aa23.44■■□□□ 1.34
CDH11-206ENST00000562998 C15orf52Q6ZUT6 534 aaKnown RBP23.44■■□□□ 1.34
CDH11-206ENST00000562998 TXNRD3Q86VQ6 643 aa23.44■■□□□ 1.34
CDH11-206ENST00000562998 TMEM57Q8N5G2 664 aa23.44■■□□□ 1.34
CDH11-206ENST00000562998 PUS3Q9BZE2 481 aaKnown RBP23.44■■□□□ 1.34
CDH11-206ENST00000562998 KCNQ5Q9NR82 932 aa23.44■■□□□ 1.34
CDH11-206ENST00000562998 PSME4Q14997 1843 aa23.44■■□□□ 1.34
CDH11-206ENST00000562998 FSTL1Q12841 308 aa23.43■■□□□ 1.34
CDH11-206ENST00000562998 TAF7LQ5H9L4 462 aa23.43■■□□□ 1.34
CDH11-206ENST00000562998 HDAC5Q9UQL6 1122 aa23.43■■□□□ 1.34
CDH11-206ENST00000562998 LRRFIP2Q9Y608 721 aaKnown RBP23.43■■□□□ 1.34
CDH11-206ENST00000562998 SNAP23O00161 211 aa23.42■■□□□ 1.34
CDH11-206ENST00000562998 TAF5LO75529 589 aa23.42■■□□□ 1.34
CDH11-206ENST00000562998 GNAI3P08754 354 aa23.42■■□□□ 1.34
CDH11-206ENST00000562998 RLBP1P12271 317 aa23.42■■□□□ 1.34
CDH11-206ENST00000562998 KLRK1P26718 216 aa23.42■■□□□ 1.34
CDH11-206ENST00000562998 HELBQ8NG08 1087 aaPredicted RBP23.42■■□□□ 1.34
CDH11-206ENST00000562998 GPRC5DQ9NZD1 345 aa23.42■■□□□ 1.34
CDH11-206ENST00000562998 ZNF609O15014 1411 aa23.42■■□□□ 1.34
CDH11-206ENST00000562998 ZNF646O15015 1829 aaPredicted RBP23.41■■□□□ 1.34
CDH11-206ENST00000562998 PSMD14O00487 310 aa23.41■■□□□ 1.34
CDH11-206ENST00000562998 POTEIP0CG38 1075 aa23.41■■□□□ 1.34
CDH11-206ENST00000562998 POTEJP0CG39 1038 aa23.41■■□□□ 1.34
CDH11-206ENST00000562998 EPHX2P34913 555 aa23.41■■□□□ 1.34
CDH11-206ENST00000562998 PODNQ7Z5L7 613 aa23.41■■□□□ 1.34
CDH11-206ENST00000562998 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
CDH11-206ENST00000562998 VIL1P09327 827 aaKnown RBP23.4■■□□□ 1.34
CDH11-206ENST00000562998 EPS15P42566 896 aa23.4■■□□□ 1.34
CDH11-206ENST00000562998 GMPSP49915 693 aaPredicted RBP23.4■■□□□ 1.34
CDH11-206ENST00000562998 PTPN12Q05209 780 aaKnown RBP23.4■■□□□ 1.34
CDH11-206ENST00000562998 MTX1Q13505 466 aa23.4■■□□□ 1.34
CDH11-206ENST00000562998 DZIP1LQ8IYY4 767 aaKnown RBP23.4■■□□□ 1.34
CDH11-206ENST00000562998 SMC1BQ8NDV3 1235 aa23.4■■□□□ 1.34
CDH11-206ENST00000562998 LRRC24Q50LG9 513 aa23.39■■□□□ 1.33
CDH11-206ENST00000562998 VGLL2Q8N8G2 317 aa23.39■■□□□ 1.33
CDH11-206ENST00000562998 KLHDC4Q8TBB5 520 aa23.39■■□□□ 1.33
CDH11-206ENST00000562998 DPF2Q92785 391 aa23.39■■□□□ 1.33
CDH11-206ENST00000562998 COA1Q9GZY4 146 aa23.39■■□□□ 1.33
CDH11-206ENST00000562998 RCAN3Q9UKA8 241 aa23.39■■□□□ 1.33
CDH11-206ENST00000562998 MROH5Q6ZUA9 1318 aa23.38■■□□□ 1.33
CDH11-206ENST00000562998 PNMA8AQ86V59 439 aaPredicted RBP23.38■■□□□ 1.33
CDH11-206ENST00000562998 LMOD1P29536 600 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms