RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 VEGFBP49765 207 aa21.48■■□□□ 1.03
TNRC6A-209ENST00000562829 FLIIQ13045 1269 aa21.48■■□□□ 1.03
TNRC6A-209ENST00000562829 DCAF8Q5TAQ9 597 aa21.48■■□□□ 1.03
TNRC6A-209ENST00000562829 ZC3H12CQ9C0D7 883 aaKnown RBP21.48■■□□□ 1.03
TNRC6A-209ENST00000562829 CNOT7Q9UIV1 285 aaKnown RBP21.48■■□□□ 1.03
TNRC6A-209ENST00000562829 GGA1Q9UJY5 639 aa21.48■■□□□ 1.03
TNRC6A-209ENST00000562829 ZBTB12Q9Y330 459 aaPredicted RBP21.48■■□□□ 1.03
TNRC6A-209ENST00000562829 MYH3P11055 1940 aa21.47■■□□□ 1.03
TNRC6A-209ENST00000562829 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
TNRC6A-209ENST00000562829 DEFB115Q30KQ5 88 aa21.47■■□□□ 1.03
TNRC6A-209ENST00000562829 MICALL2Q8IY33 904 aa21.47■■□□□ 1.03
TNRC6A-209ENST00000562829 CDC5LQ99459 802 aaKnown RBP21.47■■□□□ 1.03
TNRC6A-209ENST00000562829 PODXL2Q9NZ53 605 aa21.47■■□□□ 1.03
TNRC6A-209ENST00000562829 PCNTO95613 3336 aa21.46■■□□□ 1.03
TNRC6A-209ENST00000562829 TRPM7Q96QT4 1865 aa21.46■■□□□ 1.03
TNRC6A-209ENST00000562829 SHTN1A0MZ66 631 aa21.46■■□□□ 1.03
TNRC6A-209ENST00000562829 PAXIP1Q6ZW49 1069 aaPredicted RBP21.46■■□□□ 1.03
TNRC6A-209ENST00000562829 UBE3BQ7Z3V4 1068 aa21.46■■□□□ 1.03
TNRC6A-209ENST00000562829 TRPM4Q8TD43 1214 aa21.46■■□□□ 1.03
TNRC6A-209ENST00000562829 RASSF10A6NK89 507 aa21.45■■□□□ 1.02
TNRC6A-209ENST00000562829 DNAAF4Q8WXU2 420 aa21.45■■□□□ 1.02
TNRC6A-209ENST00000562829 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
TNRC6A-209ENST00000562829 SPEF2Q9C093 1822 aa21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 VAMP4O75379 141 aa21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 GLIS2Q9BZE0 524 aaPredicted RBP21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 MYH16Q9H6N6 1097 aa21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 GREM2Q9H772 168 aa21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 KCNQ5Q9NR82 932 aa21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 XDHP47989 1333 aa21.44■■□□□ 1.02
TNRC6A-209ENST00000562829 HIRAP54198 1017 aaPredicted RBP21.43■■□□□ 1.02
TNRC6A-209ENST00000562829 DPF2Q92785 391 aa21.43■■□□□ 1.02
TNRC6A-209ENST00000562829 AIDAQ96BJ3 306 aa21.43■■□□□ 1.02
TNRC6A-209ENST00000562829 RTL9Q8NET4 1388 aa21.43■■□□□ 1.02
TNRC6A-209ENST00000562829 RPS12P25398 132 aaKnown RBP21.42■■□□□ 1.02
TNRC6A-209ENST00000562829 GRM1Q13255 1194 aa21.42■■□□□ 1.02
TNRC6A-209ENST00000562829 GCKRQ14397 625 aa21.42■■□□□ 1.02
TNRC6A-209ENST00000562829 SAMD7Q7Z3H4 446 aa21.42■■□□□ 1.02
TNRC6A-209ENST00000562829 TNS4Q8IZW8 715 aa21.42■■□□□ 1.02
TNRC6A-209ENST00000562829 ZC3H15Q8WU90 426 aaKnown RBP21.42■■□□□ 1.02
TNRC6A-209ENST00000562829 SPINK5Q9NQ38 1064 aaPredicted RBP21.42■■□□□ 1.02
TNRC6A-209ENST00000562829 WDR33Q9C0J8 1336 aaKnown RBP21.41■■□□□ 1.02
TNRC6A-209ENST00000562829 H7C1W4 665 aa21.41■■□□□ 1.02
TNRC6A-209ENST00000562829 CELF2O95319 508 aaKnown RBP21.41■■□□□ 1.02
TNRC6A-209ENST00000562829 ATP2B4P23634 1241 aa21.41■■□□□ 1.02
TNRC6A-209ENST00000562829 TBC1D10BQ4KMP7 808 aaPredicted RBP21.41■■□□□ 1.02
TNRC6A-209ENST00000562829 ZNF408Q9H9D4 720 aa21.41■■□□□ 1.02
TNRC6A-209ENST00000562829 SCN9AQ15858 1988 aa21.41■■□□□ 1.02
TNRC6A-209ENST00000562829 RBM26Q5T8P6 1007 aaKnown RBP21.4■■□□□ 1.02
TNRC6A-209ENST00000562829 CST9Q5W186 159 aa21.4■■□□□ 1.02
TNRC6A-209ENST00000562829 CDC37L1Q7L3B6 337 aa21.4■■□□□ 1.02
TNRC6A-209ENST00000562829 LINS1Q8NG48 757 aa21.4■■□□□ 1.02
TNRC6A-209ENST00000562829 PGAP2Q9UHJ9 254 aa21.4■■□□□ 1.02
TNRC6A-209ENST00000562829 FOXN1O15353 648 aa21.39■■□□□ 1.01
TNRC6A-209ENST00000562829 IGHMBP2P38935 993 aaKnown RBP21.39■■□□□ 1.01
TNRC6A-209ENST00000562829 BSDC1Q9NW68 430 aaPredicted RBP21.39■■□□□ 1.01
TNRC6A-209ENST00000562829 ECE1P42892 770 aa21.38■■□□□ 1.01
TNRC6A-209ENST00000562829 FAM161AQ3B820 660 aa21.38■■□□□ 1.01
TNRC6A-209ENST00000562829 CAPNS2Q96L46 248 aa21.38■■□□□ 1.01
TNRC6A-209ENST00000562829 TLL2Q9Y6L7 1015 aa21.38■■□□□ 1.01
TNRC6A-209ENST00000562829 F6X3S4 739 aa21.37■■□□□ 1.01
TNRC6A-209ENST00000562829 VIL1P09327 827 aaKnown RBP21.37■■□□□ 1.01
TNRC6A-209ENST00000562829 ITGA6P23229 1130 aa21.37■■□□□ 1.01
TNRC6A-209ENST00000562829 CYP4F22Q6NT55 531 aa21.37■■□□□ 1.01
TNRC6A-209ENST00000562829 USP48Q86UV5 1035 aa21.37■■□□□ 1.01
TNRC6A-209ENST00000562829 PLA2G12BQ9BX93 195 aa21.37■■□□□ 1.01
TNRC6A-209ENST00000562829 MINPP1Q9UNW1 487 aa21.37■■□□□ 1.01
TNRC6A-209ENST00000562829 EGFRP00533 1210 aa21.36■■□□□ 1.01
TNRC6A-209ENST00000562829 CASP7P55210 303 aa21.36■■□□□ 1.01
TNRC6A-209ENST00000562829 KIF4BQ2VIQ3 1234 aa21.36■■□□□ 1.01
TNRC6A-209ENST00000562829 MPHOSPH8Q99549 860 aa21.36■■□□□ 1.01
TNRC6A-209ENST00000562829 MED23Q9ULK4 1368 aa21.36■■□□□ 1.01
TNRC6A-209ENST00000562829 CTCFP49711 727 aaPredicted RBP21.35■■□□□ 1.01
TNRC6A-209ENST00000562829 CCT4P50991 539 aaKnown RBP21.35■■□□□ 1.01
TNRC6A-209ENST00000562829 MAP2K1Q02750 393 aaPredicted RBP21.35■■□□□ 1.01
TNRC6A-209ENST00000562829 RSBN1LQ6PCB5 846 aaPredicted RBP21.35■■□□□ 1.01
TNRC6A-209ENST00000562829 DCPSQ96C86 337 aaKnown RBP21.35■■□□□ 1.01
TNRC6A-209ENST00000562829 WBP1LQ9NX94 342 aa21.35■■□□□ 1.01
TNRC6A-209ENST00000562829 PSME4Q14997 1843 aa21.34■■□□□ 1.01
TNRC6A-209ENST00000562829 WTIPA6NIX2 430 aaPredicted RBP21.34■■□□□ 1.01
TNRC6A-209ENST00000562829 CAPN15O75808 1086 aa21.34■■□□□ 1.01
TNRC6A-209ENST00000562829 KRT26Q7Z3Y9 468 aa21.34■■□□□ 1.01
TNRC6A-209ENST00000562829 PODNQ7Z5L7 613 aa21.34■■□□□ 1.01
TNRC6A-209ENST00000562829 CHMP3Q9Y3E7 222 aa21.34■■□□□ 1.01
TNRC6A-209ENST00000562829 SAPCD2Q86UD0 394 aa21.33■■□□□ 1.01
TNRC6A-209ENST00000562829 AGBL3Q8NEM8 1001 aa21.33■■□□□ 1.01
TNRC6A-209ENST00000562829 FBXW7Q969H0 707 aa21.33■■□□□ 1.01
TNRC6A-209ENST00000562829 ANKRD18BA2A2Z9 1011 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 USP17L3A6NCW0 530 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 USP17L4A6NCW7 530 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 CSF1RP07333 972 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 BEND3Q5T5X7 828 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 DLK2Q6UY11 383 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 USP17L1Q7RTZ2 530 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 ANKRD2Q9GZV1 360 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 GGA3Q9NZ52 723 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 LEMD3Q9Y2U8 911 aa21.32■■□□□ 1
TNRC6A-209ENST00000562829 POLR2AP24928 1970 aaKnown RBP21.32■■□□□ 1
TNRC6A-209ENST00000562829 THSD7BQ9C0I4 1608 aa21.31■■□□□ 1
TNRC6A-209ENST00000562829 ADM5C9JUS6 153 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms