RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 TAF7Q15545 349 aaPredicted RBP11.46□□□□□ -0.58
CCP110-206ENST00000562616 DCAF5Q96JK2 942 aa11.46□□□□□ -0.58
CCP110-206ENST00000562616 BABAM1Q9NWV8 329 aa11.46□□□□□ -0.58
CCP110-206ENST00000562616 CEMIPQ8WUJ3 1361 aa11.46□□□□□ -0.58
CCP110-206ENST00000562616 ADAMTS7Q9UKP4 1686 aa11.45□□□□□ -0.58
CCP110-206ENST00000562616 RDH13Q8NBN7 331 aa11.45□□□□□ -0.58
CCP110-206ENST00000562616 LGR6Q9HBX8 967 aa11.45□□□□□ -0.58
CCP110-206ENST00000562616 TFIP11Q9UBB9 837 aaKnown RBP11.45□□□□□ -0.58
CCP110-206ENST00000562616 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
CCP110-206ENST00000562616 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
CCP110-206ENST00000562616 CARNS1A5YM72 827 aa11.44□□□□□ -0.58
CCP110-206ENST00000562616 NBPF26B4DH59 902 aa11.44□□□□□ -0.58
CCP110-206ENST00000562616 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
CCP110-206ENST00000562616 VAMP4O75379 141 aa11.44□□□□□ -0.58
CCP110-206ENST00000562616 APBA3O96018 575 aa11.44□□□□□ -0.58
CCP110-206ENST00000562616 TMEM134Q9H6X4 195 aa11.44□□□□□ -0.58
CCP110-206ENST00000562616 MIS18AQ9NYP9 233 aa11.44□□□□□ -0.58
CCP110-206ENST00000562616 TSR3Q9UJK0 312 aaKnown RBP11.44□□□□□ -0.58
CCP110-206ENST00000562616 FDX1P10109 184 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 CABP4P57796 275 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 TWISTNBQ3B726 338 aaPredicted RBP11.43□□□□□ -0.58
CCP110-206ENST00000562616 ALDH1L2Q3SY69 923 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 TSPYL6Q8N831 410 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 C8orf58Q8NAV2 365 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 TMOD3Q9NYL9 352 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 GNEQ9Y223 722 aaKnown RBP11.43□□□□□ -0.58
CCP110-206ENST00000562616 TMEM88BA6NKF7 163 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 TEFQ10587 303 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 BCL2L13Q9BXK5 485 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 HMX1Q9NP08 348 aaPredicted RBP11.43□□□□□ -0.58
CCP110-206ENST00000562616 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
CCP110-206ENST00000562616 MRC1P22897 1456 aa11.42□□□□□ -0.58
CCP110-206ENST00000562616 ERVV-2B6SEH9 535 aa11.42□□□□□ -0.58
CCP110-206ENST00000562616 ELL2O00472 640 aaPredicted RBP11.42□□□□□ -0.58
CCP110-206ENST00000562616 COL9A1P20849 921 aa11.42□□□□□ -0.58
CCP110-206ENST00000562616 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
CCP110-206ENST00000562616 CTDSPL2Q05D32 466 aa11.42□□□□□ -0.58
CCP110-206ENST00000562616 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
CCP110-206ENST00000562616 FRAT1Q92837 279 aaPredicted RBP11.42□□□□□ -0.58
CCP110-206ENST00000562616 PPP4R2Q9NY27 417 aa11.42□□□□□ -0.58
CCP110-206ENST00000562616 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
CCP110-206ENST00000562616 SIPA1L3O60292 1781 aaPredicted RBP11.42□□□□□ -0.58
CCP110-206ENST00000562616 GPR37L1O60883 481 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 YY1P25490 414 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 PDE3AQ14432 1141 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 C20orf194Q5TEA3 1177 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 NFATC2IPQ8NCF5 419 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 PIGBQ92521 554 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 FAM198AQ9UFP1 575 aa11.41□□□□□ -0.58
CCP110-206ENST00000562616 HOXA2O43364 376 aa11.4□□□□□ -0.58
CCP110-206ENST00000562616 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
CCP110-206ENST00000562616 EXOC6Q8TAG9 804 aa11.4□□□□□ -0.58
CCP110-206ENST00000562616 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.58
CCP110-206ENST00000562616 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
CCP110-206ENST00000562616 RGPD3A6NKT7 1758 aaPredicted RBP11.4□□□□□ -0.58
CCP110-206ENST00000562616 RGPD4Q7Z3J3 1758 aa11.4□□□□□ -0.58
CCP110-206ENST00000562616 PAPPAQ13219 1627 aa11.4□□□□□ -0.59
CCP110-206ENST00000562616 BTBD11A6QL63 1104 aa11.4□□□□□ -0.59
CCP110-206ENST00000562616 KRT24Q2M2I5 525 aa11.4□□□□□ -0.59
CCP110-206ENST00000562616 UCN2Q96RP3 112 aa11.4□□□□□ -0.59
CCP110-206ENST00000562616 CRBNQ96SW2 442 aa11.4□□□□□ -0.59
CCP110-206ENST00000562616 MAFBQ9Y5Q3 323 aaPredicted RBP11.4□□□□□ -0.59
CCP110-206ENST00000562616 LY75O60449 1722 aa11.39□□□□□ -0.59
CCP110-206ENST00000562616 RREB1Q92766 1687 aa11.39□□□□□ -0.59
CCP110-206ENST00000562616 SOS1Q07889 1333 aaPredicted RBP11.39□□□□□ -0.59
CCP110-206ENST00000562616 KIF16BQ96L93 1317 aa11.39□□□□□ -0.59
CCP110-206ENST00000562616 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
CCP110-206ENST00000562616 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.39□□□□□ -0.59
CCP110-206ENST00000562616 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
CCP110-206ENST00000562616 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
CCP110-206ENST00000562616 MTMR2Q13614 643 aa11.38□□□□□ -0.59
CCP110-206ENST00000562616 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
CCP110-206ENST00000562616 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
CCP110-206ENST00000562616 NOB1Q9ULX3 412 aaKnown RBP11.38□□□□□ -0.59
CCP110-206ENST00000562616 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
CCP110-206ENST00000562616 SLC39A6Q13433 755 aa11.37□□□□□ -0.59
CCP110-206ENST00000562616 PRR7Q8TB68 274 aa11.37□□□□□ -0.59
CCP110-206ENST00000562616 TSC1Q92574 1164 aa11.37□□□□□ -0.59
CCP110-206ENST00000562616 ATG3Q9NT62 314 aa11.37□□□□□ -0.59
CCP110-206ENST00000562616 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
CCP110-206ENST00000562616 PLSCR1O15162 318 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 GCGRP47871 477 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
CCP110-206ENST00000562616 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 SMARCC1Q92922 1105 aaPredicted RBP11.36□□□□□ -0.59
CCP110-206ENST00000562616 TATDN2Q93075 761 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 KDM3BQ7LBC6 1761 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 UTRNP46939 3433 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
CCP110-206ENST00000562616 KCNQ4P56696 695 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 TXNRD1Q16881 649 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 DZIP1LQ8IYY4 767 aaKnown RBP11.36□□□□□ -0.59
CCP110-206ENST00000562616 PANK1Q8TE04 598 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms