RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PTPN12Q05209 780 aaKnown RBP20.38■□□□□ 0.85
USB1-206ENST00000562534 RPAP2Q8IXW5 612 aaPredicted RBP20.38■□□□□ 0.85
USB1-206ENST00000562534 XDHP47989 1333 aa20.37■□□□□ 0.85
USB1-206ENST00000562534 CENPBP07199 599 aaPredicted RBP20.37■□□□□ 0.85
USB1-206ENST00000562534 ATP2B4P23634 1241 aa20.37■□□□□ 0.85
USB1-206ENST00000562534 C1orf115Q9H7X2 142 aa20.37■□□□□ 0.85
USB1-206ENST00000562534 COPRSQ9NQ92 184 aa20.37■□□□□ 0.85
USB1-206ENST00000562534 RIPOR2Q9Y4F9 1068 aa20.37■□□□□ 0.85
USB1-206ENST00000562534 C6orf229H3BNL8 230 aa20.36■□□□□ 0.85
USB1-206ENST00000562534 CHRNDQ07001 517 aa20.36■□□□□ 0.85
USB1-206ENST00000562534 AAMPQ13685 434 aa20.36■□□□□ 0.85
USB1-206ENST00000562534 GGA1Q9UJY5 639 aa20.36■□□□□ 0.85
USB1-206ENST00000562534 LEMD3Q9Y2U8 911 aa20.36■□□□□ 0.85
USB1-206ENST00000562534 CACNA1SQ13698 1873 aa20.36■□□□□ 0.85
USB1-206ENST00000562534 MROH5Q6ZUA9 1318 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 PNMA6EA0A0J9YXQ4 647 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 EYA2O00167 538 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 RASSF7Q02833 373 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 KLHDC4Q8TBB5 520 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 TBC1D16Q8TBP0 767 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 EYA3Q99504 573 aa20.35■□□□□ 0.85
USB1-206ENST00000562534 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
USB1-206ENST00000562534 CIAO1O76071 339 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
USB1-206ENST00000562534 POLA2Q14181 598 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 WASHC4Q2M389 1173 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 C9orf131Q5VYM1 1079 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 CEP85Q6P2H3 762 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 CRBNQ96SW2 442 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 ZNF277Q9NRM2 450 aaPredicted RBP20.34■□□□□ 0.85
USB1-206ENST00000562534 POLLQ9UGP5 575 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
USB1-206ENST00000562534 LRRC24Q50LG9 513 aa20.33■□□□□ 0.85
USB1-206ENST00000562534 SLC51AQ86UW1 340 aa20.33■□□□□ 0.85
USB1-206ENST00000562534 ZC3H12CQ9C0D7 883 aaKnown RBP20.33■□□□□ 0.85
USB1-206ENST00000562534 RNF181Q9P0P0 153 aa20.33■□□□□ 0.85
USB1-206ENST00000562534 HMMRO75330 724 aa20.32■□□□□ 0.84
USB1-206ENST00000562534 UFL1O94874 794 aa20.32■□□□□ 0.84
USB1-206ENST00000562534 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
USB1-206ENST00000562534 METTL24Q5JXM2 366 aa20.32■□□□□ 0.84
USB1-206ENST00000562534 JDP2Q8WYK2 163 aa20.32■□□□□ 0.84
USB1-206ENST00000562534 FER1L6Q2WGJ9 1857 aa20.32■□□□□ 0.84
USB1-206ENST00000562534 COL4A1P02462 1669 aa20.32■□□□□ 0.84
USB1-206ENST00000562534 TAF5LO75529 589 aa20.31■□□□□ 0.84
USB1-206ENST00000562534 KCNJ4P48050 445 aa20.31■□□□□ 0.84
USB1-206ENST00000562534 PRELPP51888 382 aa20.31■□□□□ 0.84
USB1-206ENST00000562534 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
USB1-206ENST00000562534 G3BP1Q13283 466 aaKnown RBP eCLIP20.31■□□□□ 0.84
USB1-206ENST00000562534 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
USB1-206ENST00000562534 HELBQ8NG08 1087 aaPredicted RBP20.31■□□□□ 0.84
USB1-206ENST00000562534 SIL1Q9H173 461 aa20.31■□□□□ 0.84
USB1-206ENST00000562534 CEP126Q9P2H0 1117 aa20.31■□□□□ 0.84
USB1-206ENST00000562534 PA2G4Q9UQ80 394 aaKnown RBP20.31■□□□□ 0.84
USB1-206ENST00000562534 ZNF804BA4D1E1 1349 aa20.3■□□□□ 0.84
USB1-206ENST00000562534 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
USB1-206ENST00000562534 PDE8BO95263 885 aa20.3■□□□□ 0.84
USB1-206ENST00000562534 UBE4AQ14139 1066 aa20.3■□□□□ 0.84
USB1-206ENST00000562534 ATG9AQ7Z3C6 839 aa20.3■□□□□ 0.84
USB1-206ENST00000562534 SURF6O75683 361 aaKnown RBP20.29■□□□□ 0.84
USB1-206ENST00000562534 AOC3Q16853 763 aa20.29■□□□□ 0.84
USB1-206ENST00000562534 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
USB1-206ENST00000562534 LRRC37AA6NMS7 1700 aa20.28■□□□□ 0.84
USB1-206ENST00000562534 G3V3G9 751 aa20.28■□□□□ 0.84
USB1-206ENST00000562534 RIMBP2O15034 1052 aa20.28■□□□□ 0.84
USB1-206ENST00000562534 HSP90AB4PQ58FF6 505 aa20.28■□□□□ 0.84
USB1-206ENST00000562534 DCAF8Q5TAQ9 597 aa20.28■□□□□ 0.84
USB1-206ENST00000562534 GOLGB1Q14789 3259 aaKnown RBP20.28■□□□□ 0.84
USB1-206ENST00000562534 ZC3H4Q9UPT8 1303 aaKnown RBP20.27■□□□□ 0.84
USB1-206ENST00000562534 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
USB1-206ENST00000562534 SIRT2Q8IXJ6 389 aa20.27■□□□□ 0.84
USB1-206ENST00000562534 NIM1KQ8IY84 436 aa20.27■□□□□ 0.84
USB1-206ENST00000562534 WTIPA6NIX2 430 aaPredicted RBP20.26■□□□□ 0.83
USB1-206ENST00000562534 DPY19L2Q6NUT2 758 aa20.26■□□□□ 0.83
USB1-206ENST00000562534 VGLL2Q8N8G2 317 aa20.26■□□□□ 0.83
USB1-206ENST00000562534 EXOC6Q8TAG9 804 aa20.26■□□□□ 0.83
USB1-206ENST00000562534 ZNRF3Q9ULT6 936 aa20.26■□□□□ 0.83
USB1-206ENST00000562534 AKAP2Q9Y2D5 859 aa20.26■□□□□ 0.83
USB1-206ENST00000562534 SBF1O95248 1867 aa20.25■□□□□ 0.83
USB1-206ENST00000562534 FZD9O00144 591 aa20.25■□□□□ 0.83
USB1-206ENST00000562534 OS9Q13438 667 aaPredicted RBP20.25■□□□□ 0.83
USB1-206ENST00000562534 PUM3Q15397 648 aaKnown RBP20.25■□□□□ 0.83
USB1-206ENST00000562534 MED23Q9ULK4 1368 aa20.24■□□□□ 0.83
USB1-206ENST00000562534 CHD4Q14839 1912 aa20.24■□□□□ 0.83
USB1-206ENST00000562534 IFIT1P09914 478 aaKnown RBP20.24■□□□□ 0.83
USB1-206ENST00000562534 PODNQ7Z5L7 613 aa20.24■□□□□ 0.83
USB1-206ENST00000562534 ERC1Q8IUD2 1116 aa20.24■□□□□ 0.83
USB1-206ENST00000562534 LPIN2Q92539 896 aa20.24■□□□□ 0.83
USB1-206ENST00000562534 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
USB1-206ENST00000562534 COA1Q9GZY4 146 aa20.24■□□□□ 0.83
USB1-206ENST00000562534 PCDHB15Q9Y5E8 787 aa20.24■□□□□ 0.83
USB1-206ENST00000562534 SPEF2Q9C093 1822 aa20.23■□□□□ 0.83
USB1-206ENST00000562534 SNAP23O00161 211 aa20.23■□□□□ 0.83
USB1-206ENST00000562534 EIF6P56537 245 aaKnown RBP20.23■□□□□ 0.83
USB1-206ENST00000562534 RAB11FIP3O75154 756 aa20.22■□□□□ 0.83
USB1-206ENST00000562534 SASH1O94885 1247 aa20.22■□□□□ 0.83
USB1-206ENST00000562534 SLC5A1P13866 664 aa20.22■□□□□ 0.83
USB1-206ENST00000562534 FGFR2P21802 821 aa20.22■□□□□ 0.83
USB1-206ENST00000562534 YY1P25490 414 aa20.22■□□□□ 0.83
USB1-206ENST00000562534 TFCP2Q12800 502 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms