RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 DDX46Q7L014 1031 aaKnown RBP12.14□□□□□ -0.47
LINC00566-201ENST00000561557 SYNE4Q8N205 404 aa12.14□□□□□ -0.47
LINC00566-201ENST00000561557 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
LINC00566-201ENST00000561557 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
LINC00566-201ENST00000561557 NOB1Q9ULX3 412 aaKnown RBP12.14□□□□□ -0.47
LINC00566-201ENST00000561557 SRCAPQ6ZRS2 3230 aa12.14□□□□□ -0.47
LINC00566-201ENST00000561557 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
LINC00566-201ENST00000561557 TMC4Q7Z404 712 aa12.13□□□□□ -0.47
LINC00566-201ENST00000561557 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
LINC00566-201ENST00000561557 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
LINC00566-201ENST00000561557 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
LINC00566-201ENST00000561557 CHD4Q14839 1912 aa12.12□□□□□ -0.47
LINC00566-201ENST00000561557 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
LINC00566-201ENST00000561557 CASP7P55210 303 aa12.12□□□□□ -0.47
LINC00566-201ENST00000561557 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
LINC00566-201ENST00000561557 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
LINC00566-201ENST00000561557 RTKN2Q8IZC4 609 aa12.12□□□□□ -0.47
LINC00566-201ENST00000561557 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
LINC00566-201ENST00000561557 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
LINC00566-201ENST00000561557 TNRC6CQ9HCJ0 1690 aaKnown RBP12.11□□□□□ -0.47
LINC00566-201ENST00000561557 GRM8O00222 908 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 C21orf2O43822 256 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 GRAPQ13588 217 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 UBE3BQ7Z3V4 1068 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
LINC00566-201ENST00000561557 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
LINC00566-201ENST00000561557 UTYO14607 1347 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 ABCC4O15439 1325 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
LINC00566-201ENST00000561557 LAMB2P55268 1798 aa12.1□□□□□ -0.47
LINC00566-201ENST00000561557 BCAR3O75815 825 aa12.1□□□□□ -0.47
LINC00566-201ENST00000561557 CTSWP56202 376 aa12.1□□□□□ -0.47
LINC00566-201ENST00000561557 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
LINC00566-201ENST00000561557 SP8Q8IXZ3 490 aa12.1□□□□□ -0.47
LINC00566-201ENST00000561557 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
LINC00566-201ENST00000561557 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
LINC00566-201ENST00000561557 G3V3G9 751 aa12.09□□□□□ -0.47
LINC00566-201ENST00000561557 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
LINC00566-201ENST00000561557 CSF1RP07333 972 aa12.09□□□□□ -0.47
LINC00566-201ENST00000561557 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
LINC00566-201ENST00000561557 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
LINC00566-201ENST00000561557 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
LINC00566-201ENST00000561557 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
LINC00566-201ENST00000561557 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
LINC00566-201ENST00000561557 ATP6V0A2Q9Y487 856 aa12.09□□□□□ -0.47
LINC00566-201ENST00000561557 MS4A1P11836 297 aa12.08□□□□□ -0.48
LINC00566-201ENST00000561557 FKBP4Q02790 459 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00566-201ENST00000561557 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
LINC00566-201ENST00000561557 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
LINC00566-201ENST00000561557 CDC5LQ99459 802 aaKnown RBP12.08□□□□□ -0.48
LINC00566-201ENST00000561557 PSMD1Q99460 953 aa12.08□□□□□ -0.48
LINC00566-201ENST00000561557 VPS33BQ9H267 617 aa12.08□□□□□ -0.48
LINC00566-201ENST00000561557 LMNB1P20700 586 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 YY1P25490 414 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 MYH3P11055 1940 aa12.07□□□□□ -0.48
LINC00566-201ENST00000561557 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
LINC00566-201ENST00000561557 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 NFKBIEO00221 500 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 TRIM27P14373 513 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 FOXO4P98177 505 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 GSE1Q14687 1217 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 SUPT20HQ8NEM7 779 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
LINC00566-201ENST00000561557 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
LINC00566-201ENST00000561557 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
LINC00566-201ENST00000561557 ANKRD18BA2A2Z9 1011 aa12.05□□□□□ -0.48
LINC00566-201ENST00000561557 GNAI3P08754 354 aa12.05□□□□□ -0.48
LINC00566-201ENST00000561557 NBPF7P0C2Y1 421 aaPredicted RBP12.05□□□□□ -0.48
LINC00566-201ENST00000561557 C9orf131Q5VYM1 1079 aa12.05□□□□□ -0.48
LINC00566-201ENST00000561557 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
LINC00566-201ENST00000561557 MPNDQ8N594 471 aa12.05□□□□□ -0.48
LINC00566-201ENST00000561557 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
LINC00566-201ENST00000561557 GREM2Q9H772 168 aa12.05□□□□□ -0.48
LINC00566-201ENST00000561557 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
LINC00566-201ENST00000561557 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
LINC00566-201ENST00000561557 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 SBF1O95248 1867 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 ITGA6P23229 1130 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 IGHMBP2P38935 993 aaKnown RBP12.04□□□□□ -0.48
LINC00566-201ENST00000561557 RASSF7Q02833 373 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 IFIT5Q13325 482 aaKnown RBP12.04□□□□□ -0.48
LINC00566-201ENST00000561557 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 RABL6Q3YEC7 729 aaPredicted RBP12.04□□□□□ -0.48
LINC00566-201ENST00000561557 LMBR1LQ6UX01 489 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
LINC00566-201ENST00000561557 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
LINC00566-201ENST00000561557 RNF181Q9P0P0 153 aa12.04□□□□□ -0.48
LINC00566-201ENST00000561557 UBTFL1P0CB47 393 aaPredicted RBP12.03□□□□□ -0.48
LINC00566-201ENST00000561557 EPHA10Q5JZY3 1008 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms