RNA–Protein interactions for RNA: ENST00000561204.5

MEIS3-211, Transcript of Meis homeobox 3, humanhuman

TSL 1 (best)

Gene MEIS3, Length 2,195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-211ENST00000561204 LIG1P18858 919 aa20.61■□□□□ 0.89
MEIS3-211ENST00000561204 TERF1P54274 439 aa20.61■□□□□ 0.89
MEIS3-211ENST00000561204 LRRC24Q50LG9 513 aa20.61■□□□□ 0.89
MEIS3-211ENST00000561204 BRINP3Q76B58 766 aa20.61■□□□□ 0.89
MEIS3-211ENST00000561204 TFIP11Q9UBB9 837 aaKnown RBP20.61■□□□□ 0.89
MEIS3-211ENST00000561204 LAMA4Q16363 1823 aa20.61■□□□□ 0.89
MEIS3-211ENST00000561204 NKX1-1Q15270 411 aaPredicted RBP20.61■□□□□ 0.89
MEIS3-211ENST00000561204 MPNDQ8N594 471 aa20.61■□□□□ 0.89
MEIS3-211ENST00000561204 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
MEIS3-211ENST00000561204 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
MEIS3-211ENST00000561204 SCAND2PQ9GZW5 306 aaPredicted RBP20.61■□□□□ 0.89
MEIS3-211ENST00000561204 R3HCC1Q9Y3T6 440 aaKnown RBP20.61■□□□□ 0.89
MEIS3-211ENST00000561204 EYA2O00167 538 aa20.6■□□□□ 0.89
MEIS3-211ENST00000561204 LRRC2Q9BYS8 371 aa20.6■□□□□ 0.89
MEIS3-211ENST00000561204 HELLSQ9NRZ9 838 aa20.6■□□□□ 0.89
MEIS3-211ENST00000561204 BRF1Q92994 677 aa20.59■□□□□ 0.89
MEIS3-211ENST00000561204 SPATA32Q96LK8 384 aa20.59■□□□□ 0.89
MEIS3-211ENST00000561204 COL5A2P05997 1499 aaPredicted RBP20.59■□□□□ 0.89
MEIS3-211ENST00000561204 XIRP1Q702N8 1843 aaKnown RBP20.59■□□□□ 0.89
MEIS3-211ENST00000561204 HSP90B1P14625 803 aaKnown RBP20.59■□□□□ 0.89
MEIS3-211ENST00000561204 ZMYM1Q5SVZ6 1142 aa20.59■□□□□ 0.89
MEIS3-211ENST00000561204 LEO1Q8WVC0 666 aaPredicted RBP20.59■□□□□ 0.89
MEIS3-211ENST00000561204 SCRN1Q12765 414 aa20.58■□□□□ 0.89
MEIS3-211ENST00000561204 DSCC1Q9BVC3 393 aa20.58■□□□□ 0.89
MEIS3-211ENST00000561204 NUP62CLQ9H1M0 184 aa20.58■□□□□ 0.89
MEIS3-211ENST00000561204 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.89
MEIS3-211ENST00000561204 TNS2Q63HR2 1409 aa20.58■□□□□ 0.88
MEIS3-211ENST00000561204 AP5Z1O43299 807 aa20.58■□□□□ 0.88
MEIS3-211ENST00000561204 CCDC192P0DO97 292 aa20.58■□□□□ 0.88
MEIS3-211ENST00000561204 ZNF830Q96NB3 372 aaPredicted RBP20.58■□□□□ 0.88
MEIS3-211ENST00000561204 PUS3Q9BZE2 481 aaKnown RBP20.58■□□□□ 0.88
MEIS3-211ENST00000561204 A0A1B0GUL7 405 aa20.57■□□□□ 0.88
MEIS3-211ENST00000561204 CIAO1O76071 339 aa20.57■□□□□ 0.88
MEIS3-211ENST00000561204 KIAA2012Q0VF49 1180 aa20.57■□□□□ 0.88
MEIS3-211ENST00000561204 RESTQ13127 1097 aa20.57■□□□□ 0.88
MEIS3-211ENST00000561204 CAMK4Q16566 473 aa20.57■□□□□ 0.88
MEIS3-211ENST00000561204 DHX32Q7L7V1 743 aaKnown RBP20.57■□□□□ 0.88
MEIS3-211ENST00000561204 ATG3Q9NT62 314 aa20.57■□□□□ 0.88
MEIS3-211ENST00000561204 A0A0G2JLW4 131 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 HMGB1P09429 215 aaKnown RBP20.56■□□□□ 0.88
MEIS3-211ENST00000561204 MAP3K11Q16584 847 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 TICAM2Q86XR7 235 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 SMARCC2Q8TAQ2 1214 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 DDX11Q96FC9 970 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 PFKFB2O60825 505 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 IL2RBP14784 551 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 DACT1Q9NYF0 836 aa20.56■□□□□ 0.88
MEIS3-211ENST00000561204 IFIT1P09914 478 aaKnown RBP20.55■□□□□ 0.88
MEIS3-211ENST00000561204 HSPD1P10809 573 aaKnown RBP20.55■□□□□ 0.88
MEIS3-211ENST00000561204 MAST3O60307 1309 aa20.55■□□□□ 0.88
MEIS3-211ENST00000561204 FGD1P98174 961 aa20.55■□□□□ 0.88
MEIS3-211ENST00000561204 EXOSC10Q01780 885 aaKnown RBP20.55■□□□□ 0.88
MEIS3-211ENST00000561204 PGBD1Q96JS3 809 aa20.55■□□□□ 0.88
MEIS3-211ENST00000561204 ISCA1Q9BUE6 129 aa20.55■□□□□ 0.88
MEIS3-211ENST00000561204 MRVI1Q9Y6F6 885 aa20.55■□□□□ 0.88
MEIS3-211ENST00000561204 SPEF2Q9C093 1822 aa20.54■□□□□ 0.88
MEIS3-211ENST00000561204 GOLGA6L4A6NEF3 574 aa20.54■□□□□ 0.88
MEIS3-211ENST00000561204 RNF113AO15541 343 aaKnown RBP20.54■□□□□ 0.88
MEIS3-211ENST00000561204 LLPHQ9BRT6 129 aaKnown RBP20.54■□□□□ 0.88
MEIS3-211ENST00000561204 CARD10Q9BWT7 1032 aa20.54■□□□□ 0.88
MEIS3-211ENST00000561204 AGXT2Q9BYV1 514 aa20.54■□□□□ 0.88
MEIS3-211ENST00000561204 TTC12Q9H892 705 aaPredicted RBP20.54■□□□□ 0.88
MEIS3-211ENST00000561204 H3BQV1 296 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 RRP9O43818 475 aaKnown RBP20.53■□□□□ 0.88
MEIS3-211ENST00000561204 IFFO2Q5TF58 517 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 NSUN7Q8NE18 718 aaKnown RBP20.53■□□□□ 0.88
MEIS3-211ENST00000561204 TNMDQ9H2S6 317 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 E7EWF7 191 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 CTDNEP1O95476 244 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 HSPA2P54652 639 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 PLCB2Q00722 1185 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 TYRO3Q06418 890 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 APOBRQ0VD83 1088 aa20.53■□□□□ 0.88
MEIS3-211ENST00000561204 HSP90AA2PQ14568 343 aaPredicted RBP20.52■□□□□ 0.88
MEIS3-211ENST00000561204 RBM43Q6ZSC3 357 aaKnown RBP20.52■□□□□ 0.88
MEIS3-211ENST00000561204 FAM200AQ8TCP9 573 aa20.52■□□□□ 0.88
MEIS3-211ENST00000561204 DDX19AQ9NUU7 478 aaKnown RBP20.52■□□□□ 0.88
MEIS3-211ENST00000561204 SOS2Q07890 1332 aaPredicted RBP20.52■□□□□ 0.88
MEIS3-211ENST00000561204 M0R2C6 588 aa20.52■□□□□ 0.88
MEIS3-211ENST00000561204 TCIRG1Q13488 830 aa20.52■□□□□ 0.88
MEIS3-211ENST00000561204 CKAP2LQ8IYA6 745 aa20.52■□□□□ 0.88
MEIS3-211ENST00000561204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.52■□□□□ 0.88
MEIS3-211ENST00000561204 PIBF1Q8WXW3 757 aa20.52■□□□□ 0.88
MEIS3-211ENST00000561204 CLSTN2Q9H4D0 955 aa20.52■□□□□ 0.88
MEIS3-211ENST00000561204 ZSCAN16Q9H4T2 348 aaPredicted RBP20.52■□□□□ 0.88
MEIS3-211ENST00000561204 TOGARAM1Q9Y4F4 1720 aa20.52■□□□□ 0.87
MEIS3-211ENST00000561204 CEP126Q9P2H0 1117 aa20.51■□□□□ 0.87
MEIS3-211ENST00000561204 NR1I2O75469 434 aa20.51■□□□□ 0.87
MEIS3-211ENST00000561204 ADORA1P30542 326 aa20.5■□□□□ 0.87
MEIS3-211ENST00000561204 ADD1P35611 737 aaKnown RBP20.5■□□□□ 0.87
MEIS3-211ENST00000561204 CCDC57Q2TAC2 916 aa20.5■□□□□ 0.87
MEIS3-211ENST00000561204 OSBP2Q969R2 916 aa20.5■□□□□ 0.87
MEIS3-211ENST00000561204 STRN4Q9NRL3 753 aa20.5■□□□□ 0.87
MEIS3-211ENST00000561204 ABCA3Q99758 1704 aa20.49■□□□□ 0.87
MEIS3-211ENST00000561204 PTPDC1A2A3K4 754 aa20.49■□□□□ 0.87
MEIS3-211ENST00000561204 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
MEIS3-211ENST00000561204 TTLL5Q6EMB2 1281 aa20.49■□□□□ 0.87
MEIS3-211ENST00000561204 NAA16Q6N069 864 aaPredicted RBP20.49■□□□□ 0.87
MEIS3-211ENST00000561204 BICD2Q8TD16 824 aa20.49■□□□□ 0.87
MEIS3-211ENST00000561204 MYH15Q9Y2K3 1946 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms