RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 MYH3P11055 1940 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 CTSWP56202 376 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 CCDC83Q8IWF9 413 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
LRRC49-227ENST00000561081 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
LRRC49-227ENST00000561081 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 KRT32Q14532 448 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
LRRC49-227ENST00000561081 ZNF34Q8IZ26 560 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 XAGE2Q96GT9 111 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 GREM2Q9H772 168 aa12.69□□□□□ -0.38
LRRC49-227ENST00000561081 TRMT112Q9UI30 125 aaKnown RBP12.69□□□□□ -0.38
LRRC49-227ENST00000561081 SLIT2O94813 1529 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
LRRC49-227ENST00000561081 ITGA6P23229 1130 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 ADORA1P30542 326 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
LRRC49-227ENST00000561081 ANKRD1Q15327 319 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
LRRC49-227ENST00000561081 RIPOR2Q9Y4F9 1068 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 UBN2Q6ZU65 1347 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 SYT1P21579 422 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 CCDC158Q5M9N0 1113 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 ACSBG1Q96GR2 724 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 STX6O43752 255 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 NCLP19338 710 aaKnown RBP12.68□□□□□ -0.38
LRRC49-227ENST00000561081 SLFNL1Q499Z3 407 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 CAVIN1Q6NZI2 390 aaKnown RBP12.68□□□□□ -0.38
LRRC49-227ENST00000561081 RREB1Q92766 1687 aa12.68□□□□□ -0.38
LRRC49-227ENST00000561081 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
LRRC49-227ENST00000561081 RNF113AO15541 343 aaKnown RBP12.67□□□□□ -0.38
LRRC49-227ENST00000561081 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
LRRC49-227ENST00000561081 GJB2P29033 226 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 TOB2Q14106 344 aaPredicted RBP12.67□□□□□ -0.38
LRRC49-227ENST00000561081 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 PANK2Q9BZ23 570 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 CYP21A2P08686 494 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 GORABQ5T7V8 394 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 LDHAL6AQ6ZMR3 332 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
LRRC49-227ENST00000561081 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 PDE8AO60658 829 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 SIK1P57059 783 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 ZNF445P59923 1031 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
LRRC49-227ENST00000561081 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
LRRC49-227ENST00000561081 METTL24Q5JXM2 366 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
LRRC49-227ENST00000561081 A0A0G2JS52 829 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 PIP4K2BP78356 416 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 VGLL2Q8N8G2 317 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 ABCC12Q96J65 1359 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 MAST3O60307 1309 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 MBD3O95983 291 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 ITPK1Q13572 414 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 ATP2B3Q16720 1220 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 AK7Q96M32 723 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 NSFL1CQ9UNZ2 370 aaKnown RBP12.65□□□□□ -0.38
LRRC49-227ENST00000561081 TOM1O60784 492 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 SCARF1Q14162 830 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
LRRC49-227ENST00000561081 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
LRRC49-227ENST00000561081 CNNM1Q9NRU3 951 aa12.65□□□□□ -0.38
LRRC49-227ENST00000561081 LRP5O75197 1615 aa12.65□□□□□ -0.39
LRRC49-227ENST00000561081 F13A1P00488 732 aa12.64□□□□□ -0.39
LRRC49-227ENST00000561081 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
LRRC49-227ENST00000561081 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
LRRC49-227ENST00000561081 M0R2C6 588 aa12.64□□□□□ -0.39
LRRC49-227ENST00000561081 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
LRRC49-227ENST00000561081 TMEM87AQ8NBN3 555 aa12.64□□□□□ -0.39
LRRC49-227ENST00000561081 MTMR6Q9Y217 621 aa12.64□□□□□ -0.39
LRRC49-227ENST00000561081 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
LRRC49-227ENST00000561081 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 STOX1Q6ZVD7 989 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 LAMA4Q16363 1823 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 DTNBO60941 627 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 ZAP70P43403 619 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 OSBP2Q969R2 916 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 ZFYP08048 801 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-227ENST00000561081 ZNF512BQ96KM6 892 aaPredicted RBP12.63□□□□□ -0.39
LRRC49-227ENST00000561081 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 ATP6V1DQ9Y5K8 247 aa12.63□□□□□ -0.39
LRRC49-227ENST00000561081 TCHHQ07283 1943 aa12.62□□□□□ -0.39
LRRC49-227ENST00000561081 AKAP11Q9UKA4 1901 aa12.62□□□□□ -0.39
LRRC49-227ENST00000561081 PDE8BO95263 885 aa12.62□□□□□ -0.39
LRRC49-227ENST00000561081 HMGB1P09429 215 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms