RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 CPSF6Q16630 551 aaKnown RBP eCLIP7.7□□□□□ -1.18
AP4E1-204ENST00000561004 SPOCD1Q6ZMY3 1216 aa7.7□□□□□ -1.18
AP4E1-204ENST00000561004 PROSER2Q86WR7 435 aaPredicted RBP7.7□□□□□ -1.18
AP4E1-204ENST00000561004 TP53INP2Q8IXH6 220 aa7.7□□□□□ -1.18
AP4E1-204ENST00000561004 CLUAP1Q96AJ1 413 aa7.7□□□□□ -1.18
AP4E1-204ENST00000561004 ALG2Q9H553 416 aa7.7□□□□□ -1.18
AP4E1-204ENST00000561004 LOC105371045A0A1W2PR82 267 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 TGFBR3LH3BV60 316 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 RARAP10276 462 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 GDF6Q6KF10 455 aaPredicted RBP7.69□□□□□ -1.18
AP4E1-204ENST00000561004 VSIG10LQ86VR7 867 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 STAG2Q8N3U4 1231 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 AGBL5Q8NDL9 886 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 FAM46AQ96IP4 442 aaKnown RBP7.69□□□□□ -1.18
AP4E1-204ENST00000561004 TSPAN10Q9H1Z9 355 aaPredicted RBP7.69□□□□□ -1.18
AP4E1-204ENST00000561004 ATG3Q9NT62 314 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 LEMD3Q9Y2U8 911 aa7.69□□□□□ -1.18
AP4E1-204ENST00000561004 M0R2N6 131 aa7.68□□□□□ -1.18
AP4E1-204ENST00000561004 GHRHP01286 108 aa7.68□□□□□ -1.18
AP4E1-204ENST00000561004 MLLT1Q03111 559 aaPredicted RBP7.68□□□□□ -1.18
AP4E1-204ENST00000561004 GAS2L2Q8NHY3 880 aa7.68□□□□□ -1.18
AP4E1-204ENST00000561004 PLD4Q96BZ4 506 aa7.68□□□□□ -1.18
AP4E1-204ENST00000561004 WDR64B1ANS9 1081 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 SART1O43290 800 aaKnown RBP7.67□□□□□ -1.18
AP4E1-204ENST00000561004 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
AP4E1-204ENST00000561004 PRNPP04156 253 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 ATP1A2P50993 1020 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 LCE5AQ5TCM9 118 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 FAM20CQ8IXL6 584 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 NFATC2IPQ8NCF5 419 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 CCDC39Q9UFE4 941 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 HIF3AQ9Y2N7 669 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 PPME1Q9Y570 386 aa7.67□□□□□ -1.18
AP4E1-204ENST00000561004 BIN1O00499 593 aa7.66□□□□□ -1.18
AP4E1-204ENST00000561004 SKIP12755 728 aa7.66□□□□□ -1.18
AP4E1-204ENST00000561004 ACAD11Q709F0 780 aa7.66□□□□□ -1.18
AP4E1-204ENST00000561004 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
AP4E1-204ENST00000561004 KCNF1Q9H3M0 494 aa7.66□□□□□ -1.18
AP4E1-204ENST00000561004 SOGA1O94964 1423 aa7.66□□□□□ -1.18
AP4E1-204ENST00000561004 FARP2O94887 1054 aaPredicted RBP7.65□□□□□ -1.18
AP4E1-204ENST00000561004 CD68P34810 354 aaPredicted RBP7.65□□□□□ -1.18
AP4E1-204ENST00000561004 BEND4Q6ZU67 534 aa7.65□□□□□ -1.18
AP4E1-204ENST00000561004 KRT25Q7Z3Z0 450 aa7.65□□□□□ -1.18
AP4E1-204ENST00000561004 FAM9AQ8IZU1 332 aaPredicted RBP7.65□□□□□ -1.18
AP4E1-204ENST00000561004 FANCD2Q9BXW9 1451 aa7.65□□□□□ -1.18
AP4E1-204ENST00000561004 ZFATQ9P243 1243 aa7.65□□□□□ -1.18
AP4E1-204ENST00000561004 LOC102724428A0A0B4J2F2 783 aa7.64□□□□□ -1.19
AP4E1-204ENST00000561004 TARSP26639 723 aaKnown RBP7.64□□□□□ -1.19
AP4E1-204ENST00000561004 SIK1P57059 783 aa7.64□□□□□ -1.19
AP4E1-204ENST00000561004 RTN1Q16799 776 aa7.64□□□□□ -1.19
AP4E1-204ENST00000561004 HFE2Q6ZVN8 426 aa7.64□□□□□ -1.19
AP4E1-204ENST00000561004 TLR7Q9NYK1 1049 aaKnown RBP7.64□□□□□ -1.19
AP4E1-204ENST00000561004 RBM19Q9Y4C8 960 aaKnown RBP7.64□□□□□ -1.19
AP4E1-204ENST00000561004 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
AP4E1-204ENST00000561004 FOSL1P15407 271 aa7.63□□□□□ -1.19
AP4E1-204ENST00000561004 NCOA4Q13772 614 aa7.63□□□□□ -1.19
AP4E1-204ENST00000561004 ZNF648Q5T619 568 aaPredicted RBP7.63□□□□□ -1.19
AP4E1-204ENST00000561004 HDGFL1Q5TGJ6 251 aa7.63□□□□□ -1.19
AP4E1-204ENST00000561004 IFT43Q96FT9 208 aa7.63□□□□□ -1.19
AP4E1-204ENST00000561004 ZMYND15Q9H091 742 aa7.63□□□□□ -1.19
AP4E1-204ENST00000561004 WDR97A6NE52 1622 aa7.63□□□□□ -1.19
AP4E1-204ENST00000561004 PSAPP07602 524 aa7.62□□□□□ -1.19
AP4E1-204ENST00000561004 BMP3P12645 472 aa7.62□□□□□ -1.19
AP4E1-204ENST00000561004 HOXA10P31260 410 aaPredicted RBP7.62□□□□□ -1.19
AP4E1-204ENST00000561004 CCDC102BQ68D86 513 aa7.62□□□□□ -1.19
AP4E1-204ENST00000561004 TPCN2Q8NHX9 752 aa7.62□□□□□ -1.19
AP4E1-204ENST00000561004 ADAMTS19Q8TE59 1207 aa7.62□□□□□ -1.19
AP4E1-204ENST00000561004 SASH3O75995 380 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 ARSDP51689 593 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 DUOXA2Q1HG44 320 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 MSMPQ1L6U9 139 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 ANKRD34AQ69YU3 496 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.61□□□□□ -1.19
AP4E1-204ENST00000561004 KSR1Q8IVT5 923 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 SLC38A3Q99624 504 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 METTL22Q9BUU2 404 aaPredicted RBP7.61□□□□□ -1.19
AP4E1-204ENST00000561004 C2orf49Q9BVC5 232 aaPredicted RBP7.61□□□□□ -1.19
AP4E1-204ENST00000561004 OSBPL1AQ9BXW6 950 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 DMGDHQ9UI17 866 aaKnown RBP7.61□□□□□ -1.19
AP4E1-204ENST00000561004 DNMBPQ6XZF7 1577 aa7.61□□□□□ -1.19
AP4E1-204ENST00000561004 URB2Q14146 1524 aaKnown RBP7.61□□□□□ -1.19
AP4E1-204ENST00000561004 INPP5BP32019 993 aa7.6□□□□□ -1.19
AP4E1-204ENST00000561004 ZNF124Q15973 351 aa7.6□□□□□ -1.19
AP4E1-204ENST00000561004 FAM117BQ6P1L5 589 aa7.6□□□□□ -1.19
AP4E1-204ENST00000561004 ERICH6Q7L0X2 663 aa7.6□□□□□ -1.19
AP4E1-204ENST00000561004 KLHL23Q8NBE8 558 aa7.6□□□□□ -1.19
AP4E1-204ENST00000561004 NGLY1Q96IV0 654 aa7.6□□□□□ -1.19
AP4E1-204ENST00000561004 BSDC1Q9NW68 430 aaPredicted RBP7.6□□□□□ -1.19
AP4E1-204ENST00000561004 TOPBP1Q92547 1522 aa7.6□□□□□ -1.19
AP4E1-204ENST00000561004 IDH3AP50213 366 aa7.59□□□□□ -1.19
AP4E1-204ENST00000561004 GLMNQ92990 594 aa7.59□□□□□ -1.19
AP4E1-204ENST00000561004 CEP164Q9UPV0 1460 aa7.59□□□□□ -1.19
AP4E1-204ENST00000561004 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.2
AP4E1-204ENST00000561004 FGD5Q6ZNL6 1462 aa7.58□□□□□ -1.2
AP4E1-204ENST00000561004 SOX18P35713 384 aa7.58□□□□□ -1.2
AP4E1-204ENST00000561004 MFSD14AQ96MC6 490 aa7.58□□□□□ -1.2
AP4E1-204ENST00000561004 KIF21BO75037 1637 aa7.57□□□□□ -1.2
AP4E1-204ENST00000561004 PIK3CDO00329 1044 aa7.57□□□□□ -1.2
AP4E1-204ENST00000561004 LARGE2Q8N3Y3 721 aa7.57□□□□□ -1.2
AP4E1-204ENST00000561004 FAM177BA6PVY3 158 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms