RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 TRIM6-TRIM34B2RNG4 842 aa27.34■■□□□ 1.97
SNX22-205ENST00000560945 VGLL2Q8N8G2 317 aa27.34■■□□□ 1.97
SNX22-205ENST00000560945 CELF1Q92879 486 aaKnown RBP27.34■■□□□ 1.97
SNX22-205ENST00000560945 RILPL2Q969X0 211 aa27.34■■□□□ 1.97
SNX22-205ENST00000560945 TAF1P21675 1872 aa27.34■■□□□ 1.97
SNX22-205ENST00000560945 CDC45O75419 566 aa27.33■■□□□ 1.97
SNX22-205ENST00000560945 GPATCH3Q96I76 525 aa27.33■■□□□ 1.97
SNX22-205ENST00000560945 ADORA1P30542 326 aa27.32■■□□□ 1.96
SNX22-205ENST00000560945 NLGN1Q8N2Q7 840 aa27.32■■□□□ 1.96
SNX22-205ENST00000560945 MPHOSPH8Q99549 860 aa27.32■■□□□ 1.96
SNX22-205ENST00000560945 PDGFDQ9GZP0 370 aaPredicted RBP27.32■■□□□ 1.96
SNX22-205ENST00000560945 GLRX3O76003 335 aaKnown RBP27.32■■□□□ 1.96
SNX22-205ENST00000560945 IGHMBP2P38935 993 aaKnown RBP27.32■■□□□ 1.96
SNX22-205ENST00000560945 QSER1Q2KHR3 1735 aa27.31■■□□□ 1.96
SNX22-205ENST00000560945 BOLA2Q9H3K6 86 aa27.31■■□□□ 1.96
SNX22-205ENST00000560945 SNAP23O00161 211 aa27.3■■□□□ 1.96
SNX22-205ENST00000560945 CDC5LQ99459 802 aaKnown RBP27.3■■□□□ 1.96
SNX22-205ENST00000560945 ERC2O15083 957 aa27.3■■□□□ 1.96
SNX22-205ENST00000560945 ANKRD18AQ8IVF6 992 aa27.3■■□□□ 1.96
SNX22-205ENST00000560945 TAF5LO75529 589 aa27.29■■□□□ 1.96
SNX22-205ENST00000560945 MMP10P09238 476 aa27.29■■□□□ 1.96
SNX22-205ENST00000560945 MFAP1P55081 439 aaKnown RBP27.29■■□□□ 1.96
SNX22-205ENST00000560945 SLC51AQ86UW1 340 aa27.29■■□□□ 1.96
SNX22-205ENST00000560945 NDUFB9Q9Y6M9 179 aa27.29■■□□□ 1.96
SNX22-205ENST00000560945 PDE8BO95263 885 aa27.28■■□□□ 1.96
SNX22-205ENST00000560945 ST5P78524 1137 aa27.28■■□□□ 1.96
SNX22-205ENST00000560945 ATP2B3Q16720 1220 aa27.28■■□□□ 1.96
SNX22-205ENST00000560945 AKAP2Q9Y2D5 859 aa27.27■■□□□ 1.96
SNX22-205ENST00000560945 MROH5Q6ZUA9 1318 aa27.27■■□□□ 1.96
SNX22-205ENST00000560945 EDC3Q96F86 508 aaKnown RBP27.27■■□□□ 1.96
SNX22-205ENST00000560945 XAGE2Q96GT9 111 aa27.27■■□□□ 1.96
SNX22-205ENST00000560945 ATP5JP18859 108 aa27.26■■□□□ 1.95
SNX22-205ENST00000560945 CHRNDQ07001 517 aa27.26■■□□□ 1.95
SNX22-205ENST00000560945 WTIPA6NIX2 430 aaPredicted RBP27.24■■□□□ 1.95
SNX22-205ENST00000560945 FGFR2P21802 821 aa27.24■■□□□ 1.95
SNX22-205ENST00000560945 RPS8P62241 208 aaKnown RBP27.24■■□□□ 1.95
SNX22-205ENST00000560945 DDX46Q7L014 1031 aaKnown RBP27.24■■□□□ 1.95
SNX22-205ENST00000560945 BSDC1Q9NW68 430 aaPredicted RBP27.24■■□□□ 1.95
SNX22-205ENST00000560945 NRXN2Q9P2S2 1712 aa27.24■■□□□ 1.95
SNX22-205ENST00000560945 CNTROBQ8N137 903 aa27.23■■□□□ 1.95
SNX22-205ENST00000560945 CHMLP26374 656 aa27.23■■□□□ 1.95
SNX22-205ENST00000560945 PARP3Q9Y6F1 533 aa27.23■■□□□ 1.95
SNX22-205ENST00000560945 PUM3Q15397 648 aaKnown RBP27.22■■□□□ 1.95
SNX22-205ENST00000560945 CRY2Q49AN0 593 aa27.22■■□□□ 1.95
SNX22-205ENST00000560945 MINPP1Q9UNW1 487 aa27.22■■□□□ 1.95
SNX22-205ENST00000560945 DNAJC2Q99543 621 aaKnown RBP27.21■■□□□ 1.95
SNX22-205ENST00000560945 ANKRD31Q8N7Z5 1873 aa27.2■■□□□ 1.95
SNX22-205ENST00000560945 GORABQ5T7V8 394 aa27.2■■□□□ 1.94
SNX22-205ENST00000560945 IL25Q9H293 177 aa27.2■■□□□ 1.94
SNX22-205ENST00000560945 GRAPQ13588 217 aa27.19■■□□□ 1.94
SNX22-205ENST00000560945 SCARF1Q14162 830 aa27.19■■□□□ 1.94
SNX22-205ENST00000560945 GRAPLQ8TC17 118 aaPredicted RBP27.19■■□□□ 1.94
SNX22-205ENST00000560945 LPIN2Q92539 896 aa27.19■■□□□ 1.94
SNX22-205ENST00000560945 RPGRQ92834 1020 aaKnown RBP27.19■■□□□ 1.94
SNX22-205ENST00000560945 HAUS7Q99871 368 aa27.19■■□□□ 1.94
SNX22-205ENST00000560945 A0A1B0GUL6 1792 aa27.18■■□□□ 1.94
SNX22-205ENST00000560945 TTC39AQ5SRH9 613 aa27.18■■□□□ 1.94
SNX22-205ENST00000560945 EVI5LQ96CN4 794 aa27.18■■□□□ 1.94
SNX22-205ENST00000560945 KLRG2A4D1S0 409 aaPredicted RBP27.18■■□□□ 1.94
SNX22-205ENST00000560945 IFIT1P09914 478 aaKnown RBP27.17■■□□□ 1.94
SNX22-205ENST00000560945 CCDC158Q5M9N0 1113 aa27.17■■□□□ 1.94
SNX22-205ENST00000560945 PHKA1P46020 1223 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 CASC1Q6TDU7 716 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 PI16Q6UXB8 463 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 BRIP1Q9BX63 1249 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 SNRKQ9NRH2 765 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 AK9Q5TCS8 1911 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 ARAP2Q8WZ64 1704 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 SLC5A1P13866 664 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 ESYT1Q9BSJ8 1104 aa27.16■■□□□ 1.94
SNX22-205ENST00000560945 TBC1D32Q96NH3 1257 aa27.15■■□□□ 1.94
SNX22-205ENST00000560945 CHGBP05060 677 aa27.14■■□□□ 1.94
SNX22-205ENST00000560945 CCDC102BQ68D86 513 aa27.14■■□□□ 1.94
SNX22-205ENST00000560945 RBM17Q96I25 401 aaKnown RBP27.14■■□□□ 1.94
SNX22-205ENST00000560945 FSD1Q9BTV5 496 aa27.14■■□□□ 1.94
SNX22-205ENST00000560945 ANTXR1Q9H6X2 564 aa27.14■■□□□ 1.94
SNX22-205ENST00000560945 UPF2Q9HAU5 1272 aaKnown RBP27.14■■□□□ 1.94
SNX22-205ENST00000560945 GOLIM4O00461 696 aa27.13■■□□□ 1.93
SNX22-205ENST00000560945 C22orf23Q9BZE7 217 aa27.13■■□□□ 1.93
SNX22-205ENST00000560945 HOXA10P31260 410 aaPredicted RBP27.12■■□□□ 1.93
SNX22-205ENST00000560945 MCAMP43121 646 aa27.12■■□□□ 1.93
SNX22-205ENST00000560945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.12■■□□□ 1.93
SNX22-205ENST00000560945 PAG1Q9NWQ8 432 aa27.12■■□□□ 1.93
SNX22-205ENST00000560945 KLRK1P26718 216 aa27.11■■□□□ 1.93
SNX22-205ENST00000560945 BCAMP50895 628 aa27.11■■□□□ 1.93
SNX22-205ENST00000560945 CWC27Q6UX04 472 aaKnown RBP27.11■■□□□ 1.93
SNX22-205ENST00000560945 ZAP70P43403 619 aa27.11■■□□□ 1.93
SNX22-205ENST00000560945 FKBP4Q02790 459 aaKnown RBP eCLIP27.11■■□□□ 1.93
SNX22-205ENST00000560945 COL11A2P13942 1736 aaPredicted RBP27.1■■□□□ 1.93
SNX22-205ENST00000560945 SRGNP10124 158 aa27.1■■□□□ 1.93
SNX22-205ENST00000560945 R3HDM1Q15032 1099 aaKnown RBP27.1■■□□□ 1.93
SNX22-205ENST00000560945 FAM227BQ96M60 508 aa27.1■■□□□ 1.93
SNX22-205ENST00000560945 UBE4AQ14139 1066 aa27.09■■□□□ 1.93
SNX22-205ENST00000560945 DIAPH3Q9NSV4 1193 aa27.09■■□□□ 1.93
SNX22-205ENST00000560945 ARID4AP29374 1257 aaPredicted RBP27.09■■□□□ 1.93
SNX22-205ENST00000560945 GYG1P46976 350 aa27.09■■□□□ 1.93
SNX22-205ENST00000560945 NMIQ13287 307 aaPredicted RBP27.09■■□□□ 1.93
SNX22-205ENST00000560945 SLFNL1Q499Z3 407 aa27.09■■□□□ 1.93
SNX22-205ENST00000560945 CRAMP1Q96RY5 1269 aa27.09■■□□□ 1.93
SNX22-205ENST00000560945 USP26Q9BXU7 913 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms