RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	WWC3	Q9ULE0	1092 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	ABCC4	O15439	1325 aa		10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	C21orf2	O43822	256 aa		10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	CCT4	P50991	539 aa	Known RBP	10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	CCDC93	Q567U6	631 aa		10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	RTL5	Q5HYW3	569 aa	Predicted RBP	10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	INTS3	Q68E01	1043 aa	Known RBP	10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	ATF7IP	Q6VMQ6	1270 aa		10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	ARHGAP27	Q6ZUM4	889 aa		10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	RTKN2	Q8IZC4	609 aa		10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	JARID2	Q92833	1246 aa	Predicted RBP	10.16	□□□□□ -0.78
RNF31-222	ENST00000560631	NFKBIE	O00221	500 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	RPS8	P62241	208 aa	Known RBP	10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	FOXO4	P98177	505 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	IER5L	Q5T953	404 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	SP8	Q8IXZ3	490 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	PSMD1	Q99460	953 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	USP44	Q9H0E7	712 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	ATP6V0A2	Q9Y487	856 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	LRRC37A	A6NMS7	1700 aa		10.15	□□□□□ -0.78
RNF31-222	ENST00000560631	PPEF1	O14829	653 aa	Predicted RBP	10.14	□□□□□ -0.79
RNF31-222	ENST00000560631	TRIM27	P14373	513 aa		10.14	□□□□□ -0.79
RNF31-222	ENST00000560631	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
RNF31-222	ENST00000560631	ZKSCAN2	Q63HK3	967 aa		10.14	□□□□□ -0.79
RNF31-222	ENST00000560631	VPS33B	Q9H267	617 aa		10.14	□□□□□ -0.79
RNF31-222	ENST00000560631	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	LMNB1	P20700	586 aa		10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	RABL6	Q3YEC7	729 aa	Predicted RBP	10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	CELF1	Q92879	486 aa	Known RBP	10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	KAZALD1	Q96I82	304 aa		10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	SUCLG2	Q96I99	432 aa		10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	CDC5L	Q99459	802 aa	Known RBP	10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	SEC31B	Q9NQW1	1179 aa		10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	RCAN3	Q9UKA8	241 aa		10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	HDAC5	Q9UQL6	1122 aa		10.13	□□□□□ -0.79
RNF31-222	ENST00000560631	COL4A1	P02462	1669 aa		10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	YY1	P25490	414 aa		10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	PRELP	P51888	382 aa		10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	EPHA10	Q5JZY3	1008 aa		10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	ANKRD18A	Q8IVF6	992 aa		10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	TAOK3	Q9H2K8	898 aa		10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	GREM2	Q9H772	168 aa		10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	BSDC1	Q9NW68	430 aa	Predicted RBP	10.12	□□□□□ -0.79
RNF31-222	ENST00000560631	LTBP1	Q14766	1721 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	GNAI3	P08754	354 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	MS4A1	P11836	297 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	ITGA6	P23229	1130 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	RASSF7	Q02833	373 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	C9orf131	Q5VYM1	1079 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	LMBR1L	Q6UX01	489 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	OLFM4	Q6UX06	510 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	CDAN1	Q8IWY9	1227 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	DZIP1L	Q8IYY4	767 aa	Known RBP	10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	FRAT1	Q92837	279 aa	Predicted RBP	10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	TMX4	Q9H1E5	349 aa	Predicted RBP	10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	PODXL2	Q9NZ53	605 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	TNN	Q9UQP3	1299 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	SPEF2	Q9C093	1822 aa		10.11	□□□□□ -0.79
RNF31-222	ENST00000560631	ANKRD18B	A2A2Z9	1011 aa		10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	UBTFL1	P0CB47	393 aa	Predicted RBP	10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	FAM161A	Q3B820	660 aa		10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	MPND	Q8N594	471 aa		10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	ANKRD44	Q8N8A2	993 aa		10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	SUPT20H	Q8NEM7	779 aa		10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	TMEM106C	Q9BVX2	250 aa		10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	BICC1	Q9H694	974 aa	Known RBP	10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	RNF181	Q9P0P0	153 aa		10.1	□□□□□ -0.79
RNF31-222	ENST00000560631	RLBP1	P12271	317 aa		10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	IGHMBP2	P38935	993 aa	Known RBP	10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	IARS	P41252	1262 aa	Known RBP	10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	IFIT5	Q13325	482 aa	Known RBP	10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	TMEM57	Q8N5G2	664 aa		10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	MEIS3	Q99687	375 aa		10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	MINPP1	Q9UNW1	487 aa		10.09	□□□□□ -0.79
RNF31-222	ENST00000560631		A0A1B0GUL6	1792 aa		10.09	□□□□□ -0.79
RNF31-222	ENST00000560631	ZBTB7B	O15156	539 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	KIAA2012	Q0VF49	1180 aa		10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	PDE3A	Q14432	1141 aa		10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	CCDC57	Q2TAC2	916 aa		10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	DPP8	Q6V1X1	898 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	FTSJ3	Q8IY81	847 aa	Known RBP	10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	CLUAP1	Q96AJ1	413 aa		10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	MPHOSPH8	Q99549	860 aa		10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	DUOX1	Q9NRD9	1551 aa		10.08	□□□□□ -0.8
RNF31-222	ENST00000560631	TIAM2	Q8IVF5	1701 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	FZD9	O00144	591 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	ATP2B4	P23634	1241 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	GPSM2	P81274	684 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	MTX1	Q13505	466 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	SLC51A	Q86UW1	340 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	YTHDC1	Q96MU7	727 aa	Known RBP	10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	POLL	Q9UGP5	575 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	FBXO3	Q9UK99	471 aa		10.07	□□□□□ -0.8
RNF31-222	ENST00000560631	XDH	P47989	1333 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms