RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
SMAD3-214ENST00000560402 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
SMAD3-214ENST00000560402 SPEF2Q9C093 1822 aa17.44■□□□□ 0.38
SMAD3-214ENST00000560402 PSMD14O00487 310 aa17.43■□□□□ 0.38
SMAD3-214ENST00000560402 CAPN15O75808 1086 aa17.43■□□□□ 0.38
SMAD3-214ENST00000560402 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
SMAD3-214ENST00000560402 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMAD3-214ENST00000560402 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
SMAD3-214ENST00000560402 STK31Q9BXU1 1019 aa17.43■□□□□ 0.38
SMAD3-214ENST00000560402 GLIS2Q9BZE0 524 aaPredicted RBP17.43■□□□□ 0.38
SMAD3-214ENST00000560402 HSPA8P11142 646 aaKnown RBP17.42■□□□□ 0.38
SMAD3-214ENST00000560402 HIRAP54198 1017 aaPredicted RBP17.42■□□□□ 0.38
SMAD3-214ENST00000560402 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
SMAD3-214ENST00000560402 IL16Q14005 1332 aa17.42■□□□□ 0.38
SMAD3-214ENST00000560402 RIMBP2O15034 1052 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 UFL1O94874 794 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 MAP2K2P36507 400 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 LBX1P52954 281 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 CYP4F22Q6NT55 531 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 SAPCD2Q86UD0 394 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 BEGAINQ9BUH8 593 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 XDHP47989 1333 aa17.41■□□□□ 0.38
SMAD3-214ENST00000560402 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
SMAD3-214ENST00000560402 KSR2Q6VAB6 950 aa17.4■□□□□ 0.38
SMAD3-214ENST00000560402 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
SMAD3-214ENST00000560402 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
SMAD3-214ENST00000560402 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
SMAD3-214ENST00000560402 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
SMAD3-214ENST00000560402 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
SMAD3-214ENST00000560402 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
SMAD3-214ENST00000560402 POLR2AP24928 1970 aaKnown RBP17.4■□□□□ 0.38
SMAD3-214ENST00000560402 G3V3G9 751 aa17.39■□□□□ 0.37
SMAD3-214ENST00000560402 CTSWP56202 376 aa17.39■□□□□ 0.37
SMAD3-214ENST00000560402 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
SMAD3-214ENST00000560402 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
SMAD3-214ENST00000560402 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
SMAD3-214ENST00000560402 PI4KAP2A4QPH2 592 aa17.38■□□□□ 0.37
SMAD3-214ENST00000560402 CA12O43570 354 aa17.38■□□□□ 0.37
SMAD3-214ENST00000560402 VIL1P09327 827 aaKnown RBP17.38■□□□□ 0.37
SMAD3-214ENST00000560402 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
SMAD3-214ENST00000560402 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
SMAD3-214ENST00000560402 WWC1Q8IX03 1113 aa17.38■□□□□ 0.37
SMAD3-214ENST00000560402 PI4KAP1Q8N8J0 262 aa17.38■□□□□ 0.37
SMAD3-214ENST00000560402 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
SMAD3-214ENST00000560402 ZNF646O15015 1829 aaPredicted RBP17.37■□□□□ 0.37
SMAD3-214ENST00000560402 IGKV5-2P06315 115 aa17.37■□□□□ 0.37
SMAD3-214ENST00000560402 GRM1Q13255 1194 aa17.37■□□□□ 0.37
SMAD3-214ENST00000560402 TBC1D10BQ4KMP7 808 aaPredicted RBP17.37■□□□□ 0.37
SMAD3-214ENST00000560402 SAMD7Q7Z3H4 446 aa17.37■□□□□ 0.37
SMAD3-214ENST00000560402 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
SMAD3-214ENST00000560402 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
SMAD3-214ENST00000560402 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
SMAD3-214ENST00000560402 KIF4BQ2VIQ3 1234 aa17.36■□□□□ 0.37
SMAD3-214ENST00000560402 KRT26Q7Z3Y9 468 aa17.36■□□□□ 0.37
SMAD3-214ENST00000560402 AGBL3Q8NEM8 1001 aa17.36■□□□□ 0.37
SMAD3-214ENST00000560402 DCPSQ96C86 337 aaKnown RBP17.36■□□□□ 0.37
SMAD3-214ENST00000560402 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
SMAD3-214ENST00000560402 NEURL1BA8MQ27 555 aa17.35■□□□□ 0.37
SMAD3-214ENST00000560402 NOGQ13253 232 aa17.34■□□□□ 0.37
SMAD3-214ENST00000560402 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
SMAD3-214ENST00000560402 RSBN1LQ6PCB5 846 aaPredicted RBP17.34■□□□□ 0.37
SMAD3-214ENST00000560402 USP48Q86UV5 1035 aa17.34■□□□□ 0.37
SMAD3-214ENST00000560402 TTLL11Q8NHH1 800 aa17.34■□□□□ 0.37
SMAD3-214ENST00000560402 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
SMAD3-214ENST00000560402 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
SMAD3-214ENST00000560402 AOC2O75106 756 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 EGFRP00533 1210 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 HUNKP57058 714 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 ZNF280AP59817 542 aaPredicted RBP17.33■□□□□ 0.36
SMAD3-214ENST00000560402 PODNQ7Z5L7 613 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 SULF1Q8IWU6 871 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 JARID2Q92833 1246 aaPredicted RBP17.33■□□□□ 0.36
SMAD3-214ENST00000560402 PLA2G12BQ9BX93 195 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 KCNQ5Q9NR82 932 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 GGA3Q9NZ52 723 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 A0A1B0GUL6 1792 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.36
SMAD3-214ENST00000560402 FANCIQ9NVI1 1328 aa17.32■□□□□ 0.36
SMAD3-214ENST00000560402 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
SMAD3-214ENST00000560402 FLIIQ13045 1269 aa17.32■□□□□ 0.36
SMAD3-214ENST00000560402 CWF19L2Q2TBE0 894 aaKnown RBP17.32■□□□□ 0.36
SMAD3-214ENST00000560402 C2orf69Q8N8R5 385 aa17.32■□□□□ 0.36
SMAD3-214ENST00000560402 MYH16Q9H6N6 1097 aa17.32■□□□□ 0.36
SMAD3-214ENST00000560402 GREM2Q9H772 168 aa17.32■□□□□ 0.36
SMAD3-214ENST00000560402 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
SMAD3-214ENST00000560402 PITPNM2Q9BZ72 1349 aa17.31■□□□□ 0.36
SMAD3-214ENST00000560402 USP17L3A6NCW0 530 aa17.31■□□□□ 0.36
SMAD3-214ENST00000560402 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
SMAD3-214ENST00000560402 H7C1W4 665 aa17.31■□□□□ 0.36
SMAD3-214ENST00000560402 IGHMBP2P38935 993 aaKnown RBP17.31■□□□□ 0.36
SMAD3-214ENST00000560402 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
SMAD3-214ENST00000560402 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
SMAD3-214ENST00000560402 UBE3BQ7Z3V4 1068 aa17.31■□□□□ 0.36
SMAD3-214ENST00000560402 WDR63Q8IWG1 891 aa17.31■□□□□ 0.36
SMAD3-214ENST00000560402 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
SMAD3-214ENST00000560402 AKAP11Q9UKA4 1901 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms