RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 DBNDD1Q9H9R9 158 aa26.38■■□□□ 1.81
ETFA-213ENST00000560309 ABT1Q9ULW3 272 aaKnown RBP26.38■■□□□ 1.81
ETFA-213ENST00000560309 ECE2O60344 883 aa26.37■■□□□ 1.81
ETFA-213ENST00000560309 G2E3Q7L622 706 aa26.37■■□□□ 1.81
ETFA-213ENST00000560309 TTLL11Q8NHH1 800 aa26.37■■□□□ 1.81
ETFA-213ENST00000560309 XDHP47989 1333 aa26.37■■□□□ 1.81
ETFA-213ENST00000560309 RTL9Q8NET4 1388 aa26.36■■□□□ 1.81
ETFA-213ENST00000560309 PSMD14O00487 310 aa26.36■■□□□ 1.81
ETFA-213ENST00000560309 UFL1O94874 794 aa26.36■■□□□ 1.81
ETFA-213ENST00000560309 ATP2B4P23634 1241 aa26.36■■□□□ 1.81
ETFA-213ENST00000560309 FKBP5Q13451 457 aaPredicted RBP26.36■■□□□ 1.81
ETFA-213ENST00000560309 CDC37L1Q7L3B6 337 aa26.36■■□□□ 1.81
ETFA-213ENST00000560309 JARID2Q92833 1246 aaPredicted RBP26.36■■□□□ 1.81
ETFA-213ENST00000560309 CWF19L2Q2TBE0 894 aaKnown RBP26.35■■□□□ 1.81
ETFA-213ENST00000560309 COL13A1Q5TAT6 717 aaPredicted RBP26.35■■□□□ 1.81
ETFA-213ENST00000560309 MICALL2Q8IY33 904 aa26.35■■□□□ 1.81
ETFA-213ENST00000560309 LINS1Q8NG48 757 aa26.35■■□□□ 1.81
ETFA-213ENST00000560309 DNAAF4Q8WXU2 420 aa26.35■■□□□ 1.81
ETFA-213ENST00000560309 PLA2G12BQ9BX93 195 aa26.35■■□□□ 1.81
ETFA-213ENST00000560309 BSDC1Q9NW68 430 aaPredicted RBP26.35■■□□□ 1.81
ETFA-213ENST00000560309 SALL2Q9Y467 1007 aaPredicted RBP26.35■■□□□ 1.81
ETFA-213ENST00000560309 ECE1P42892 770 aa26.34■■□□□ 1.81
ETFA-213ENST00000560309 GCKRQ14397 625 aa26.34■■□□□ 1.81
ETFA-213ENST00000560309 AIDAQ96BJ3 306 aa26.34■■□□□ 1.81
ETFA-213ENST00000560309 CCDC85AQ96PX6 553 aaPredicted RBP26.34■■□□□ 1.81
ETFA-213ENST00000560309 TRPM7Q96QT4 1865 aa26.34■■□□□ 1.81
ETFA-213ENST00000560309 VIL1P09327 827 aaKnown RBP26.33■■□□□ 1.81
ETFA-213ENST00000560309 EXOSC9Q06265 439 aaKnown RBP26.33■■□□□ 1.81
ETFA-213ENST00000560309 DOK7Q18PE1 504 aa26.33■■□□□ 1.81
ETFA-213ENST00000560309 FAM9BQ8IZU0 186 aa26.33■■□□□ 1.81
ETFA-213ENST00000560309 MYH3P11055 1940 aa26.33■■□□□ 1.81
ETFA-213ENST00000560309 HIRAP54198 1017 aaPredicted RBP26.32■■□□□ 1.8
ETFA-213ENST00000560309 UBE3BQ7Z3V4 1068 aa26.32■■□□□ 1.8
ETFA-213ENST00000560309 PODNQ7Z5L7 613 aa26.32■■□□□ 1.8
ETFA-213ENST00000560309 ZBTB12Q9Y330 459 aaPredicted RBP26.32■■□□□ 1.8
ETFA-213ENST00000560309 WDR33Q9C0J8 1336 aaKnown RBP26.32■■□□□ 1.8
ETFA-213ENST00000560309 MAP2K1Q02750 393 aaPredicted RBP26.31■■□□□ 1.8
ETFA-213ENST00000560309 CST9Q5W186 159 aa26.31■■□□□ 1.8
ETFA-213ENST00000560309 TLL2Q9Y6L7 1015 aa26.31■■□□□ 1.8
ETFA-213ENST00000560309 COL4A1P02462 1669 aa26.31■■□□□ 1.8
ETFA-213ENST00000560309 PCNTO95613 3336 aa26.3■■□□□ 1.8
ETFA-213ENST00000560309 IGHMBP2P38935 993 aaKnown RBP26.3■■□□□ 1.8
ETFA-213ENST00000560309 AGBL3Q8NEM8 1001 aa26.3■■□□□ 1.8
ETFA-213ENST00000560309 GREM2Q9H772 168 aa26.3■■□□□ 1.8
ETFA-213ENST00000560309 TRAF5O00463 557 aa26.29■■□□□ 1.8
ETFA-213ENST00000560309 TRPM4Q8TD43 1214 aa26.29■■□□□ 1.8
ETFA-213ENST00000560309 HHIPL1Q96JK4 782 aa26.29■■□□□ 1.8
ETFA-213ENST00000560309 WBP1LQ9NX94 342 aa26.29■■□□□ 1.8
ETFA-213ENST00000560309 MINPP1Q9UNW1 487 aa26.29■■□□□ 1.8
ETFA-213ENST00000560309 CSF1RP07333 972 aa26.28■■□□□ 1.8
ETFA-213ENST00000560309 CTCFP49711 727 aaPredicted RBP26.28■■□□□ 1.8
ETFA-213ENST00000560309 TNS4Q8IZW8 715 aa26.28■■□□□ 1.8
ETFA-213ENST00000560309 GLIS2Q9BZE0 524 aaPredicted RBP26.28■■□□□ 1.8
ETFA-213ENST00000560309 CELF2O95319 508 aaKnown RBP26.27■■□□□ 1.8
ETFA-213ENST00000560309 ANKRD2Q9GZV1 360 aa26.27■■□□□ 1.8
ETFA-213ENST00000560309 PRDM10Q9NQV6 1147 aa26.27■■□□□ 1.8
ETFA-213ENST00000560309 KCNQ5Q9NR82 932 aa26.27■■□□□ 1.8
ETFA-213ENST00000560309 LEMD3Q9Y2U8 911 aa26.27■■□□□ 1.8
ETFA-213ENST00000560309 ZNF609O15014 1411 aa26.27■■□□□ 1.8
ETFA-213ENST00000560309 CASP7P55210 303 aa26.26■■□□□ 1.79
ETFA-213ENST00000560309 SAMD7Q7Z3H4 446 aa26.26■■□□□ 1.79
ETFA-213ENST00000560309 DCPSQ96C86 337 aaKnown RBP26.26■■□□□ 1.79
ETFA-213ENST00000560309 GPR101Q96P66 508 aaPredicted RBP26.26■■□□□ 1.79
ETFA-213ENST00000560309 MED23Q9ULK4 1368 aa26.25■■□□□ 1.79
ETFA-213ENST00000560309 FMR1Q06787 632 aaKnown RBP eCLIP26.25■■□□□ 1.792e-6■□□□□ 8.2
ETFA-213ENST00000560309 RSBN1LQ6PCB5 846 aaPredicted RBP26.25■■□□□ 1.79
ETFA-213ENST00000560309 SAPCD2Q86UD0 394 aa26.25■■□□□ 1.79
ETFA-213ENST00000560309 CAPNS2Q96L46 248 aa26.25■■□□□ 1.79
ETFA-213ENST00000560309 MPHOSPH8Q99549 860 aa26.25■■□□□ 1.79
ETFA-213ENST00000560309 ITGA6P23229 1130 aa26.24■■□□□ 1.79
ETFA-213ENST00000560309 MAP2K2P36507 400 aa26.24■■□□□ 1.79
ETFA-213ENST00000560309 MMP14P50281 582 aa26.24■■□□□ 1.79
ETFA-213ENST00000560309 CCT4P50991 539 aaKnown RBP26.24■■□□□ 1.79
ETFA-213ENST00000560309 TBC1D10BQ4KMP7 808 aaPredicted RBP26.24■■□□□ 1.79
ETFA-213ENST00000560309 PAXIP1Q6ZW49 1069 aaPredicted RBP26.24■■□□□ 1.79
ETFA-213ENST00000560309 SPINK5Q9NQ38 1064 aaPredicted RBP26.24■■□□□ 1.79
ETFA-213ENST00000560309 SHTN1A0MZ66 631 aa26.23■■□□□ 1.79
ETFA-213ENST00000560309 USP17L3A6NCW0 530 aa26.23■■□□□ 1.79
ETFA-213ENST00000560309 USP17L4A6NCW7 530 aa26.23■■□□□ 1.79
ETFA-213ENST00000560309 FOXN1O15353 648 aa26.23■■□□□ 1.79
ETFA-213ENST00000560309 USP17L1Q7RTZ2 530 aa26.23■■□□□ 1.79
ETFA-213ENST00000560309 ZNF280AP59817 542 aaPredicted RBP26.22■■□□□ 1.79
ETFA-213ENST00000560309 KIF4BQ2VIQ3 1234 aa26.22■■□□□ 1.79
ETFA-213ENST00000560309 BEND3Q5T5X7 828 aa26.22■■□□□ 1.79
ETFA-213ENST00000560309 USP48Q86UV5 1035 aa26.22■■□□□ 1.79
ETFA-213ENST00000560309 BEGAINQ9BUH8 593 aa26.22■■□□□ 1.79
ETFA-213ENST00000560309 COA1Q9GZY4 146 aa26.22■■□□□ 1.79
ETFA-213ENST00000560309 SCN9AQ15858 1988 aa26.21■■□□□ 1.79
ETFA-213ENST00000560309 ANKRD18BA2A2Z9 1011 aa26.21■■□□□ 1.79
ETFA-213ENST00000560309 RBM26Q5T8P6 1007 aaKnown RBP26.21■■□□□ 1.79
ETFA-213ENST00000560309 KRT26Q7Z3Y9 468 aa26.21■■□□□ 1.79
ETFA-213ENST00000560309 USP17L8P0C7I0 530 aa26.2■■□□□ 1.78
ETFA-213ENST00000560309 MYO3BQ8WXR4 1341 aa26.19■■□□□ 1.78
ETFA-213ENST00000560309 PSME4Q14997 1843 aa26.19■■□□□ 1.78
ETFA-213ENST00000560309 ALDH1L1O75891 902 aa26.19■■□□□ 1.78
ETFA-213ENST00000560309 CYP4F22Q6NT55 531 aa26.19■■□□□ 1.78
ETFA-213ENST00000560309 GMLQ99445 158 aa26.19■■□□□ 1.78
ETFA-213ENST00000560309 ZNF408Q9H9D4 720 aa26.19■■□□□ 1.78
ETFA-213ENST00000560309 ZNF804BA4D1E1 1349 aa26.18■■□□□ 1.78
ETFA-213ENST00000560309 ZNF521Q96K83 1311 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms