RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 H7C1W4 665 aa29.63■■■□□ 2.33
CRNDE-209ENST00000560208 UBE3BQ7Z3V4 1068 aa29.63■■■□□ 2.33
CRNDE-209ENST00000560208 TTLL11Q8NHH1 800 aa29.63■■■□□ 2.33
CRNDE-209ENST00000560208 GCKRQ14397 625 aa29.62■■■□□ 2.33
CRNDE-209ENST00000560208 CDC5LQ99459 802 aaKnown RBP29.62■■■□□ 2.33
CRNDE-209ENST00000560208 UFL1O94874 794 aa29.61■■■□□ 2.33
CRNDE-209ENST00000560208 HNRNPUQ00839 825 aaKnown RBP eCLIP29.61■■■□□ 2.33
CRNDE-209ENST00000560208 DOK7Q18PE1 504 aa29.61■■■□□ 2.33
CRNDE-209ENST00000560208 ZC3H12CQ9C0D7 883 aaKnown RBP29.61■■■□□ 2.33
CRNDE-209ENST00000560208 GGA1Q9UJY5 639 aa29.61■■■□□ 2.33
CRNDE-209ENST00000560208 LINS1Q8NG48 757 aa29.6■■■□□ 2.33
CRNDE-209ENST00000560208 GREM2Q9H772 168 aa29.6■■■□□ 2.33
CRNDE-209ENST00000560208 SPEF2Q9C093 1822 aa29.59■■■□□ 2.33
CRNDE-209ENST00000560208 PSMD14O00487 310 aa29.59■■■□□ 2.33
CRNDE-209ENST00000560208 ECE2O60344 883 aa29.59■■■□□ 2.33
CRNDE-209ENST00000560208 CNOT7Q9UIV1 285 aaKnown RBP29.59■■■□□ 2.33
CRNDE-209ENST00000560208 CNTNAP1P78357 1384 aa29.59■■■□□ 2.33
CRNDE-209ENST00000560208 CDCA7LQ96GN5 454 aa29.58■■■□□ 2.33
CRNDE-209ENST00000560208 RTL9Q8NET4 1388 aa29.57■■■□□ 2.32
CRNDE-209ENST00000560208 XDHP47989 1333 aa29.57■■■□□ 2.32
CRNDE-209ENST00000560208 E9PSI1 815 aa29.57■■■□□ 2.32
CRNDE-209ENST00000560208 KCNQ5Q9NR82 932 aa29.57■■■□□ 2.32
CRNDE-209ENST00000560208 ZBTB12Q9Y330 459 aaPredicted RBP29.57■■■□□ 2.32
CRNDE-209ENST00000560208 TRPM7Q96QT4 1865 aa29.57■■■□□ 2.32
CRNDE-209ENST00000560208 SCN9AQ15858 1988 aa29.56■■■□□ 2.32
CRNDE-209ENST00000560208 G3V3G9 751 aa29.56■■■□□ 2.32
CRNDE-209ENST00000560208 H7C1D1 291 aa29.56■■■□□ 2.32
CRNDE-209ENST00000560208 CASP7P55210 303 aa29.56■■■□□ 2.32
CRNDE-209ENST00000560208 DCAF8Q5TAQ9 597 aa29.56■■■□□ 2.32
CRNDE-209ENST00000560208 DPF2Q92785 391 aa29.56■■■□□ 2.32
CRNDE-209ENST00000560208 PLA2G12BQ9BX93 195 aa29.56■■■□□ 2.32
CRNDE-209ENST00000560208 SHTN1A0MZ66 631 aa29.55■■■□□ 2.32
CRNDE-209ENST00000560208 F6X3S4 739 aa29.55■■■□□ 2.32
CRNDE-209ENST00000560208 FMR1Q06787 632 aaKnown RBP eCLIP29.55■■■□□ 2.32
CRNDE-209ENST00000560208 BSDC1Q9NW68 430 aaPredicted RBP29.55■■■□□ 2.32
CRNDE-209ENST00000560208 ATP2B4P23634 1241 aa29.54■■■□□ 2.32
CRNDE-209ENST00000560208 HIRAP54198 1017 aaPredicted RBP29.54■■■□□ 2.32
CRNDE-209ENST00000560208 SLFN5Q08AF3 891 aa29.54■■■□□ 2.32
CRNDE-209ENST00000560208 MICALL2Q8IY33 904 aa29.54■■■□□ 2.32
CRNDE-209ENST00000560208 TRPM4Q8TD43 1214 aa29.54■■■□□ 2.32
CRNDE-209ENST00000560208 PGAP2Q9UHJ9 254 aa29.54■■■□□ 2.32
CRNDE-209ENST00000560208 TRAF5O00463 557 aa29.53■■■□□ 2.32
CRNDE-209ENST00000560208 HSPA1AP0DMV8 641 aaKnown RBP29.53■■■□□ 2.32
CRNDE-209ENST00000560208 HSPA1BP0DMV9 641 aaKnown RBP29.53■■■□□ 2.32
CRNDE-209ENST00000560208 MINPP1Q9UNW1 487 aa29.53■■■□□ 2.32
CRNDE-209ENST00000560208 RPS12P25398 132 aaKnown RBP29.52■■■□□ 2.32
CRNDE-209ENST00000560208 IFFO2Q5TF58 517 aa29.52■■■□□ 2.32
CRNDE-209ENST00000560208 ZC3H15Q8WU90 426 aaKnown RBP29.52■■■□□ 2.32
CRNDE-209ENST00000560208 CSF1RP07333 972 aa29.51■■■□□ 2.31
CRNDE-209ENST00000560208 VEGFBP49765 207 aa29.51■■■□□ 2.31
CRNDE-209ENST00000560208 BEND3Q5T5X7 828 aa29.51■■■□□ 2.31
CRNDE-209ENST00000560208 RASSF10A6NK89 507 aa29.5■■■□□ 2.31
CRNDE-209ENST00000560208 ITGA6P23229 1130 aa29.5■■■□□ 2.31
CRNDE-209ENST00000560208 IGHMBP2P38935 993 aaKnown RBP29.5■■■□□ 2.31
CRNDE-209ENST00000560208 ABT1Q9ULW3 272 aaKnown RBP29.5■■■□□ 2.31
CRNDE-209ENST00000560208 VIL1P09327 827 aaKnown RBP29.49■■■□□ 2.31
CRNDE-209ENST00000560208 DEFB115Q30KQ5 88 aa29.49■■■□□ 2.31
CRNDE-209ENST00000560208 FAM161AQ3B820 660 aa29.49■■■□□ 2.31
CRNDE-209ENST00000560208 SAMD7Q7Z3H4 446 aa29.49■■■□□ 2.31
CRNDE-209ENST00000560208 GLIS2Q9BZE0 524 aaPredicted RBP29.49■■■□□ 2.31
CRNDE-209ENST00000560208 PSME4Q14997 1843 aa29.48■■■□□ 2.31
CRNDE-209ENST00000560208 WTIPA6NIX2 430 aaPredicted RBP29.48■■■□□ 2.31
CRNDE-209ENST00000560208 CST9Q5W186 159 aa29.48■■■□□ 2.31
CRNDE-209ENST00000560208 POLR2AP24928 1970 aaKnown RBP29.48■■■□□ 2.31
CRNDE-209ENST00000560208 CCT4P50991 539 aaKnown RBP29.46■■■□□ 2.31
CRNDE-209ENST00000560208 TBC1D10BQ4KMP7 808 aaPredicted RBP29.46■■■□□ 2.31
CRNDE-209ENST00000560208 MPHOSPH8Q99549 860 aa29.46■■■□□ 2.31
CRNDE-209ENST00000560208 CDC37L1Q7L3B6 337 aa29.45■■■□□ 2.31
CRNDE-209ENST00000560208 MED23Q9ULK4 1368 aa29.44■■■□□ 2.3
CRNDE-209ENST00000560208 EGFRP00533 1210 aa29.44■■■□□ 2.3
CRNDE-209ENST00000560208 FOXO4P98177 505 aa29.44■■■□□ 2.3
CRNDE-209ENST00000560208 RBM26Q5T8P6 1007 aaKnown RBP29.44■■■□□ 2.3
CRNDE-209ENST00000560208 COL13A1Q5TAT6 717 aaPredicted RBP29.44■■■□□ 2.3
CRNDE-209ENST00000560208 PODNQ7Z5L7 613 aa29.44■■■□□ 2.3
CRNDE-209ENST00000560208 ANKRD18BA2A2Z9 1011 aa29.43■■■□□ 2.3
CRNDE-209ENST00000560208 RSBN1LQ6PCB5 846 aaPredicted RBP29.43■■■□□ 2.3
CRNDE-209ENST00000560208 SLC4A10Q6U841 1118 aa29.43■■■□□ 2.3
CRNDE-209ENST00000560208 LEMD3Q9Y2U8 911 aa29.43■■■□□ 2.3
CRNDE-209ENST00000560208 GRM8O00222 908 aa29.42■■■□□ 2.3
CRNDE-209ENST00000560208 CELF2O95319 508 aaKnown RBP29.42■■■□□ 2.3
CRNDE-209ENST00000560208 AGBL3Q8NEM8 1001 aa29.42■■■□□ 2.3
CRNDE-209ENST00000560208 ANKRD2Q9GZV1 360 aa29.42■■■□□ 2.3
CRNDE-209ENST00000560208 USP17L3A6NCW0 530 aa29.41■■■□□ 2.3
CRNDE-209ENST00000560208 USP17L4A6NCW7 530 aa29.41■■■□□ 2.3
CRNDE-209ENST00000560208 ALDH1L1O75891 902 aa29.41■■■□□ 2.3
CRNDE-209ENST00000560208 USP17L1Q7RTZ2 530 aa29.41■■■□□ 2.3
CRNDE-209ENST00000560208 TRMT2AQ8IZ69 625 aaKnown RBP29.41■■■□□ 2.3
CRNDE-209ENST00000560208 C9orf78Q9NZ63 289 aaPredicted RBP29.41■■■□□ 2.3
CRNDE-209ENST00000560208 WDR33Q9C0J8 1336 aaKnown RBP29.41■■■□□ 2.3
CRNDE-209ENST00000560208 USP48Q86UV5 1035 aa29.4■■■□□ 2.3
CRNDE-209ENST00000560208 MRPL50Q8N5N7 158 aaKnown RBP29.4■■■□□ 2.3
CRNDE-209ENST00000560208 SRCIN1Q9C0H9 1055 aa29.4■■■□□ 2.3
CRNDE-209ENST00000560208 CHMP3Q9Y3E7 222 aa29.4■■■□□ 2.3
CRNDE-209ENST00000560208 TLL2Q9Y6L7 1015 aa29.4■■■□□ 2.3
CRNDE-209ENST00000560208 ZNF609O15014 1411 aa29.39■■■□□ 2.3
CRNDE-209ENST00000560208 IFIT5Q13325 482 aaKnown RBP29.39■■■□□ 2.3
CRNDE-209ENST00000560208 KIF4BQ2VIQ3 1234 aa29.39■■■□□ 2.3
CRNDE-209ENST00000560208 ZNF804BA4D1E1 1349 aa29.39■■■□□ 2.3
CRNDE-209ENST00000560208 CHRNDQ07001 517 aa29.38■■■□□ 2.29
CRNDE-209ENST00000560208 EPHA10Q5JZY3 1008 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms