RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 ANKIB1Q9P2G1 1089 aa26.12■■□□□ 1.77
CHRNA3-207ENST00000559941 SPEF2Q9C093 1822 aa26.11■■□□□ 1.77
CHRNA3-207ENST00000559941 GPR101Q96P66 508 aaPredicted RBP26.11■■□□□ 1.77
CHRNA3-207ENST00000559941 CDC5LQ99459 802 aaKnown RBP26.11■■□□□ 1.77
CHRNA3-207ENST00000559941 PLA2G12BQ9BX93 195 aa26.11■■□□□ 1.77
CHRNA3-207ENST00000559941 ZC3H12CQ9C0D7 883 aaKnown RBP26.11■■□□□ 1.77
CHRNA3-207ENST00000559941 GREM2Q9H772 168 aa26.11■■□□□ 1.77
CHRNA3-207ENST00000559941 GGA1Q9UJY5 639 aa26.11■■□□□ 1.77
CHRNA3-207ENST00000559941 ECE2O60344 883 aa26.1■■□□□ 1.77
CHRNA3-207ENST00000559941 UFL1O94874 794 aa26.1■■□□□ 1.77
CHRNA3-207ENST00000559941 CASP7P55210 303 aa26.1■■□□□ 1.77
CHRNA3-207ENST00000559941 MKRN1Q9UHC7 482 aaKnown RBP26.1■■□□□ 1.77
CHRNA3-207ENST00000559941 TRPM7Q96QT4 1865 aa26.1■■□□□ 1.77
CHRNA3-207ENST00000559941 PSMD14O00487 310 aa26.09■■□□□ 1.77
CHRNA3-207ENST00000559941 DOK7Q18PE1 504 aa26.09■■□□□ 1.77
CHRNA3-207ENST00000559941 SCN9AQ15858 1988 aa26.09■■□□□ 1.77
CHRNA3-207ENST00000559941 XDHP47989 1333 aa26.09■■□□□ 1.77
CHRNA3-207ENST00000559941 DPF2Q92785 391 aa26.08■■□□□ 1.77
CHRNA3-207ENST00000559941 CNOT7Q9UIV1 285 aaKnown RBP26.08■■□□□ 1.77
CHRNA3-207ENST00000559941 CNTNAP1P78357 1384 aa26.07■■□□□ 1.76
CHRNA3-207ENST00000559941 BSDC1Q9NW68 430 aaPredicted RBP26.07■■□□□ 1.76
CHRNA3-207ENST00000559941 ZBTB12Q9Y330 459 aaPredicted RBP26.07■■□□□ 1.76
CHRNA3-207ENST00000559941 ATP2B4P23634 1241 aa26.06■■□□□ 1.76
CHRNA3-207ENST00000559941 KCNQ5Q9NR82 932 aa26.06■■□□□ 1.76
CHRNA3-207ENST00000559941 PGAP2Q9UHJ9 254 aa26.06■■□□□ 1.76
CHRNA3-207ENST00000559941 PSME4Q14997 1843 aa26.05■■□□□ 1.76
CHRNA3-207ENST00000559941 F6X3S4 739 aa26.05■■□□□ 1.76
CHRNA3-207ENST00000559941 H7C1D1 291 aa26.05■■□□□ 1.76
CHRNA3-207ENST00000559941 CSF1RP07333 972 aa26.05■■□□□ 1.76
CHRNA3-207ENST00000559941 HIRAP54198 1017 aaPredicted RBP26.05■■□□□ 1.76
CHRNA3-207ENST00000559941 BEND3Q5T5X7 828 aa26.05■■□□□ 1.76
CHRNA3-207ENST00000559941 MINPP1Q9UNW1 487 aa26.05■■□□□ 1.76
CHRNA3-207ENST00000559941 RPS12P25398 132 aaKnown RBP26.04■■□□□ 1.76
CHRNA3-207ENST00000559941 MICALL2Q8IY33 904 aa26.04■■□□□ 1.76
CHRNA3-207ENST00000559941 TRPM4Q8TD43 1214 aa26.04■■□□□ 1.76
CHRNA3-207ENST00000559941 ZC3H15Q8WU90 426 aaKnown RBP26.04■■□□□ 1.76
CHRNA3-207ENST00000559941 SHTN1A0MZ66 631 aa26.03■■□□□ 1.76
CHRNA3-207ENST00000559941 G3V3G9 751 aa26.03■■□□□ 1.76
CHRNA3-207ENST00000559941 FMR1Q06787 632 aaKnown RBP eCLIP26.03■■□□□ 1.76
CHRNA3-207ENST00000559941 DCAF8Q5TAQ9 597 aa26.03■■□□□ 1.76
CHRNA3-207ENST00000559941 VIL1P09327 827 aaKnown RBP26.02■■□□□ 1.76
CHRNA3-207ENST00000559941 ITGA6P23229 1130 aa26.02■■□□□ 1.76
CHRNA3-207ENST00000559941 IGHMBP2P38935 993 aaKnown RBP26.02■■□□□ 1.76
CHRNA3-207ENST00000559941 RASSF10A6NK89 507 aa26.01■■□□□ 1.75
CHRNA3-207ENST00000559941 TRAF5O00463 557 aa26.01■■□□□ 1.75
CHRNA3-207ENST00000559941 HSPA1AP0DMV8 641 aaKnown RBP26.01■■□□□ 1.75
CHRNA3-207ENST00000559941 HSPA1BP0DMV9 641 aaKnown RBP26.01■■□□□ 1.75
CHRNA3-207ENST00000559941 POLR2AP24928 1970 aaKnown RBP26.01■■□□□ 1.75
CHRNA3-207ENST00000559941 E9PSI1 815 aa26■■□□□ 1.75
CHRNA3-207ENST00000559941 DEFB115Q30KQ5 88 aa26■■□□□ 1.75
CHRNA3-207ENST00000559941 FAM161AQ3B820 660 aa26■■□□□ 1.75
CHRNA3-207ENST00000559941 VEGFBP49765 207 aa25.99■■□□□ 1.75
CHRNA3-207ENST00000559941 CCT4P50991 539 aaKnown RBP25.99■■□□□ 1.75
CHRNA3-207ENST00000559941 IFFO2Q5TF58 517 aa25.99■■□□□ 1.75
CHRNA3-207ENST00000559941 MED23Q9ULK4 1368 aa25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 WTIPA6NIX2 430 aaPredicted RBP25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 FOXO4P98177 505 aa25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 CST9Q5W186 159 aa25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 SAMD7Q7Z3H4 446 aa25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 PODNQ7Z5L7 613 aa25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 GLIS2Q9BZE0 524 aaPredicted RBP25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 ABT1Q9ULW3 272 aaKnown RBP25.98■■□□□ 1.75
CHRNA3-207ENST00000559941 ZNF609O15014 1411 aa25.97■■□□□ 1.75
CHRNA3-207ENST00000559941 ALDH1L1O75891 902 aa25.97■■□□□ 1.75
CHRNA3-207ENST00000559941 SLFN5Q08AF3 891 aa25.97■■□□□ 1.75
CHRNA3-207ENST00000559941 MPHOSPH8Q99549 860 aa25.97■■□□□ 1.75
CHRNA3-207ENST00000559941 LEMD3Q9Y2U8 911 aa25.97■■□□□ 1.75
CHRNA3-207ENST00000559941 ANKRD18BA2A2Z9 1011 aa25.96■■□□□ 1.75
CHRNA3-207ENST00000559941 GRM8O00222 908 aa25.96■■□□□ 1.75
CHRNA3-207ENST00000559941 TBC1D10BQ4KMP7 808 aaPredicted RBP25.96■■□□□ 1.75
CHRNA3-207ENST00000559941 CDC37L1Q7L3B6 337 aa25.96■■□□□ 1.75
CHRNA3-207ENST00000559941 ANKRD2Q9GZV1 360 aa25.96■■□□□ 1.75
CHRNA3-207ENST00000559941 CCER2I3L3R5 266 aa25.95■■□□□ 1.74
CHRNA3-207ENST00000559941 RSBN1LQ6PCB5 846 aaPredicted RBP25.95■■□□□ 1.74
CHRNA3-207ENST00000559941 MRPL50Q8N5N7 158 aaKnown RBP25.95■■□□□ 1.74
CHRNA3-207ENST00000559941 AGBL3Q8NEM8 1001 aa25.95■■□□□ 1.74
CHRNA3-207ENST00000559941 SRCIN1Q9C0H9 1055 aa25.95■■□□□ 1.74
CHRNA3-207ENST00000559941 EGFRP00533 1210 aa25.94■■□□□ 1.74
CHRNA3-207ENST00000559941 SLC4A10Q6U841 1118 aa25.94■■□□□ 1.74
CHRNA3-207ENST00000559941 RBM26Q5T8P6 1007 aaKnown RBP25.93■■□□□ 1.74
CHRNA3-207ENST00000559941 C9orf78Q9NZ63 289 aaPredicted RBP25.93■■□□□ 1.74
CHRNA3-207ENST00000559941 TLL2Q9Y6L7 1015 aa25.93■■□□□ 1.74
CHRNA3-207ENST00000559941 ZNF646O15015 1829 aaPredicted RBP25.93■■□□□ 1.74
CHRNA3-207ENST00000559941 A0A1B0GUL6 1792 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 ZNF804BA4D1E1 1349 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 USP17L3A6NCW0 530 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 USP17L4A6NCW7 530 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 CELF2O95319 508 aaKnown RBP25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 IFIT5Q13325 482 aaKnown RBP25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 EPHA10Q5JZY3 1008 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 LMBR1LQ6UX01 489 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 USP17L1Q7RTZ2 530 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 GMLQ99445 158 aa25.92■■□□□ 1.74
CHRNA3-207ENST00000559941 WDR33Q9C0J8 1336 aaKnown RBP25.91■■□□□ 1.74
CHRNA3-207ENST00000559941 ZNF280AP59817 542 aaPredicted RBP25.91■■□□□ 1.74
CHRNA3-207ENST00000559941 CHRNDQ07001 517 aa25.91■■□□□ 1.74
CHRNA3-207ENST00000559941 KIF4BQ2VIQ3 1234 aa25.91■■□□□ 1.74
CHRNA3-207ENST00000559941 COL13A1Q5TAT6 717 aaPredicted RBP25.91■■□□□ 1.74
CHRNA3-207ENST00000559941 USP48Q86UV5 1035 aa25.91■■□□□ 1.74
CHRNA3-207ENST00000559941 TXNRD3Q86VQ6 643 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms