RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CHRNA5P30532 468 aa12.86□□□□□ -0.35
TPM1-221ENST00000559831 PTGER2P43116 358 aa12.86□□□□□ -0.35
TPM1-221ENST00000559831 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
TPM1-221ENST00000559831 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
TPM1-221ENST00000559831 CEP126Q9P2H0 1117 aa12.86□□□□□ -0.35
TPM1-221ENST00000559831 RIPOR2Q9Y4F9 1068 aa12.86□□□□□ -0.35
TPM1-221ENST00000559831 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
TPM1-221ENST00000559831 PDE4AP27815 886 aa12.85□□□□□ -0.35
TPM1-221ENST00000559831 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
TPM1-221ENST00000559831 AACSQ86V21 672 aa12.85□□□□□ -0.35
TPM1-221ENST00000559831 C16orf71Q8IYS4 520 aaPredicted RBP12.85□□□□□ -0.35
TPM1-221ENST00000559831 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
TPM1-221ENST00000559831 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
TPM1-221ENST00000559831 CRAMP1Q96RY5 1269 aa12.85□□□□□ -0.35
TPM1-221ENST00000559831 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
TPM1-221ENST00000559831 BSDC1Q9NW68 430 aaPredicted RBP12.85□□□□□ -0.35
TPM1-221ENST00000559831 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
TPM1-221ENST00000559831 SLX4Q8IY92 1834 aa12.85□□□□□ -0.35
TPM1-221ENST00000559831 MROH5Q6ZUA9 1318 aa12.85□□□□□ -0.35
TPM1-221ENST00000559831 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
TPM1-221ENST00000559831 CHRNDQ07001 517 aa12.84□□□□□ -0.35
TPM1-221ENST00000559831 OTUD7AQ8TE49 926 aaPredicted RBP12.84□□□□□ -0.35
TPM1-221ENST00000559831 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
TPM1-221ENST00000559831 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 ZNF609O15014 1411 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 TAF5LO75529 589 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
TPM1-221ENST00000559831 DPEP1P16444 411 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 ALDH1B1P30837 517 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 TNNI3KQ59H18 835 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 STYK1Q6J9G0 422 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
TPM1-221ENST00000559831 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.36
TPM1-221ENST00000559831 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 BBOX1O75936 387 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 SLC51AQ86UW1 340 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 VGLL2Q8N8G2 317 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 CNKSR1Q969H4 720 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 EAF2Q96CJ1 260 aaPredicted RBP12.82□□□□□ -0.36
TPM1-221ENST00000559831 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 MINPP1Q9UNW1 487 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
TPM1-221ENST00000559831 BRCA1P38398 1863 aaKnown RBP12.82□□□□□ -0.36
TPM1-221ENST00000559831 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
TPM1-221ENST00000559831 PDE8BO95263 885 aa12.81□□□□□ -0.36
TPM1-221ENST00000559831 KCNJ4P48050 445 aa12.81□□□□□ -0.36
TPM1-221ENST00000559831 PRPF40BQ6NWY9 871 aaKnown RBP12.81□□□□□ -0.36
TPM1-221ENST00000559831 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
TPM1-221ENST00000559831 ANKRD2Q9GZV1 360 aa12.81□□□□□ -0.36
TPM1-221ENST00000559831 GPR108Q9NPR9 543 aa12.81□□□□□ -0.36
TPM1-221ENST00000559831 TLR7Q9NYK1 1049 aaKnown RBP12.81□□□□□ -0.36
TPM1-221ENST00000559831 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
TPM1-221ENST00000559831 AK9Q5TCS8 1911 aa12.81□□□□□ -0.36
TPM1-221ENST00000559831 SLC5A1P13866 664 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 MX1P20591 662 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 TGFB2P61812 414 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 TIMM10P62072 90 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
TPM1-221ENST00000559831 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 PLEKHM2Q8IWE5 1019 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 DBNDD2Q9BQY9 259 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
TPM1-221ENST00000559831 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 WWC3Q9ULE0 1092 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 CD2APQ9Y5K6 639 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
TPM1-221ENST00000559831 SNAP23O00161 211 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 ADORA1P30542 326 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 PDE1AP54750 535 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 GPSM2P81274 684 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 GORABQ5T7V8 394 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 SP8Q8IXZ3 490 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 TTLL6Q8N841 843 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 LPIN2Q92539 896 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 DBNLQ9UJU6 430 aaKnown RBP12.79□□□□□ -0.36
TPM1-221ENST00000559831 ATP6V0A2Q9Y487 856 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 XDHP47989 1333 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
TPM1-221ENST00000559831 IFIT1P09914 478 aaKnown RBP12.78□□□□□ -0.36
TPM1-221ENST00000559831 FGFR2P21802 821 aa12.78□□□□□ -0.36
TPM1-221ENST00000559831 KCNA3P22001 575 aa12.78□□□□□ -0.36
TPM1-221ENST00000559831 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
TPM1-221ENST00000559831 XAGE2Q96GT9 111 aa12.78□□□□□ -0.36
TPM1-221ENST00000559831 NSFL1CQ9UNZ2 370 aaKnown RBP12.78□□□□□ -0.36
TPM1-221ENST00000559831 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
TPM1-221ENST00000559831 WTIPA6NIX2 430 aaPredicted RBP12.77□□□□□ -0.37
TPM1-221ENST00000559831 UFL1O94874 794 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 TTC39AQ5SRH9 613 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 NLGN2Q8NFZ4 835 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 GGA1Q9UJY5 639 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.37
TPM1-221ENST00000559831 ERC2O15083 957 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 MPNDQ8N594 471 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms